Styela clava (leathery sea squirt): 120332770
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Entry
120332770 CDS
T07291
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120332770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120332770
03036 Chromosome and associated proteins [BR:
sclv03036
]
120332770
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120332770
Coactivators
SAGA/TFTC/STAGA complex
120332770
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120332770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120332770
NCBI-ProteinID:
XP_039256018
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MRVSPPGSTDTVLTSSSSTPNTLNSYNSGMNSLPPFSAAKNGVQQVRTASPVTSQQQGML
NDWSTGLNEGYGAPTPQQPTLVLNSQLPKASTPVAKQLTTLTTVNKIPQPGMQQSNTGLQ
NNLLNPTSKAQVSTTQPMVTARPQQGGAVQLASGITIPPGMVLARHQNGQLLLVSSNSLS
SSSTTNTSTVPVTQTATSGTVTTLKNSTTAGVGTSSPQPAITATTAGQVVARTVVPVTNS
INLKAVAAKQTVAVSKVSTTSPATTPQNSQSITLSQEDVVNVSKCRNFLTTLIKLASAGG
QSMETVSNVKKLVQNLIDDKIEPEFFTQQLQIELHSAPQPYLVPFLKRSLPLLRLTMMQQ
SGGGSGQVPSAIAVAALRASSAATSSPSPTNAAANSPKPVTTAPKRPPPKTKVVGKKNSV
PDIRLPRVSTSPNQISYQRLTASPNAVVCRASLSMPPPSAVTSSPRTSSQKWASPSSAGG
GGGGGTFKDDDDINDVASMAGVNLSEESARILATNSGLVGSQIRSCSDTTIVNSQALRRK
LTAIVSKNPHVHQIHPDVINFTARAVETRIKDLIEKVSLAASHRISNFRETDHYEAAQDV
KSQLKFVLQLDQLEKKRHAQSEREVLMRAMKSRSKNEDPEQLRLKQRAKEMQQLEMERMQ
IRNADETALNAIGPRKKKAKIESTLHSGLSESKDVSSPLRSSSLRPRIKRVNVKDLIFVL
EQEKDTSRSKLLYKSYLK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagggttagcccacctggatcgacggacacagttctcacatcttcatcaagtacccca
aacacgttgaacagctataattctggaatgaatagtttacctccattttctgcagcaaaa
aacggagtacagcaggtcaggactgctagcccggtcacctctcagcagcaagggatgctt
aatgactggtcaacaggtctaaatgaggggtatggggccccaaccccacaacagccgacc
ctagttttaaattcacagttgcctaaagcatccacacctgtggcaaaacaattaacgact
ctgaccacagtaaataaaattccacaaccaggaatgcagcaatcaaatactggtttgcaa
aataatttattgaatcctacatcgaaggctcaagtttctacgactcagccaatggtgact
gcgcgtcctcaacaaggtggtgcagtgcaactagcatctgggataactattcctccaggt
atggttctagcaagacatcagaatggacagttgctccttgtgagtagtaattcgttgtca
tcgtcatctactacaaatacatccacagttcctgtaactcagaccgcgacatctgggact
gtaacaacgttgaaaaattcgacaacagcaggtgttgggacatcatcacctcaacccgca
ataactgcaacaacagctggtcaggtggtagcaagaacagtggttccagttacaaattca
attaaccttaaagctgttgctgctaagcaaacggttgctgtcagtaaagtatctaccaca
agtccagcgacaacaccacagaattctcaatctataacgctatctcaggaagatgtagtc
aatgtatcaaaatgtcggaactttttaacaacattaataaaactggcttcggccggtggt
caatcaatggaaactgtcagtaacgttaagaaactcgttcaaaatttaatcgatgataaa
attgagccggaatttttcactcaacaacttcaaattgaattgcattctgcaccgcaacct
taccttgttccatttttaaagcgaagtctccctttgttgcgacttactatgatgcaacag
agcggtggtgggtcaggacaagtcccatcggcaatcgcggtggcggctttgagggcgtct
tctgccgcgacgtcatcaccgtcacccacgaatgcagcagctaattctccgaaaccagta
acaacagcacctaaacgaccaccaccaaagactaaagttgttggaaaaaagaattctgtg
cccgatatcagacttccgagagtatctacttcacccaatcaaatttcctatcaaaggctc
actgccagtcctaacgcagttgtgtgtcgagcatcactttcaatgccgcctccatctgcc
gtaacatcatcacctcgtacttcctcgcaaaagtgggcgtcgccttcatcagcaggggga
ggtggtgggggaggcactttcaaagatgatgatgacatcaatgacgttgcttcgatggcg
ggtgtcaatctttcagaggaaagtgctcgtatcctagcaacgaattccggactggttgga
tcgcaaattcgatcttgttctgatacgacaatcgttaattcacaagctttaagaagaaag
cttactgcaatagtttcgaaaaacccacacgttcatcagatccatcccgatgtgataaat
ttcacagcgcgtgcagtggaaaccagaattaaagatttgatagaaaaggtgtcgttagca
gcctctcatcgaatatcaaactttagggagaccgatcattatgaagcagcacaagacgtt
aaatcccaactgaaatttgttttgcaacttgatcagttagaaaagaaacgacatgcgcag
tcggagagagaagttttaatgagagctatgaagagtcggtcaaaaaatgaagatccagaa
caattaagattaaagcagcgtgcaaaagaaatgcaacaattggaaatggaacgaatgcaa
attaggaacgcagatgagacggctttaaatgcaatcggtcctaggaaaaagaaagcgaaa
attgaatctactttacacagcgggttgtcagagtccaaagatgtttcatcgccacttcgc
tcgtcgtcgctaaggccgaggatcaagagagtcaatgttaaagacttaatttttgttttg
gaacaagaaaaggacacgagcaggtcaaaacttctgtacaaatcatacctcaaataa
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