Styela clava (leathery sea squirt): 120332878
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Entry
120332878 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: PHD finger protein rhinoceros-like
KO
K22156
protein Jade-3
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120332878
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
HBO1 complex
120332878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
PHD_2
EPL1
PHD
Peptidase_C74
Motif
Other DBs
NCBI-GeneID:
120332878
NCBI-ProteinID:
XP_039256142
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MGDVKNHTSAKNEQTKKSGMRIPSTGDNNFGNDDTKISSGSSGSTVALSTSGKNGPVDSN
TDNERRTRRSRHSTTIKSVNLKLNTDLATKKDSAKPESPNAPTAYLNSVMNTLVSENASS
PAPDKLTSGNGQTSNGGSLNIFKSSQKRKNRNQEIGSHHKPAEVFRKDLISAMKIPDTSQ
LLSEEYWVMKDSWRMEWEKGVQVPVNAEGLPGIKVDTVPKDIRGDFRMPRKFIKTTPDVG
DRDTVNLNVLADSTCRYDLDEVDVSWLQVINEERECLGSTALDEFTMEIIMEELETQCHE
NMQLAIKTKEGLGIEYDENIVCDVCRSPDCEEGNEMVFCDGCNLCVHQACYGILKVPDGS
WLCKPCALGIRGSAVCILCXKKGGAMKSTKSGRKWAHMSCALWIPEINIADPDRMEPITK
VSHIPSSRWALVCTVCKERNIGACIQCSVRHCVTAYHVTCAMENGFDMITDCLSPNSPLS
TGESSIVFRSFCQKHSRNSKKKLENSPGKKTEEEKRSDRQKRIAELEEDFYTLVKSDGVA
SALNISPDTATEVLEYWKLKRKANFNRPLLTPKQEEGKALAEAAETGLQRRLRMFTHLRQ
DLERVRNLCYMIGKREKMKRSSVKLMSNVFLAQIHYVEYRMSQSSYFDPKILLSSLPTCG
NKQILDQAKKETMELLMTPEWSQRDESRSNSPSNIEYVNTSKKKDEKVVASKNDDAESDV
SDRPRPLPKSSATVTQITSLKDKPSNSKMENKSSNSQKQGDTRKNGLVADIKVEYRKGSN
EGVPFRDDALKQKILDDNDFKKHSKKMTLETKSEVSKTFDPKSNKNLRRSSQESESRRRS
HSNLRGREKSDSKNDFTKKVQEKSNSDNKVRHKYSSEKRFESKKHRTTSSSDGRIDTVKY
NEKSGKINEEIRTSRARLKHAQLESPDISAPNSPNVQSSTISKDVSENRRSADETKDLID
NPSLINKKRKMSSTTADNERSTTERGDKNSRKMLRRSSRNLDFSNSEDSDIDSLRSLKRG
MTIMTETISETKRISVEEDSWDDKSQRKRTWSGSGDQPPSPSKSKKRRKESTQSVKDLKQ
SSTKRPTSPMQQNSSEDFTDGESAQSRASSQNKGRTRKPTSGSFSPFIKERRRSSANENL
SPVVKKPLSKHQQAKNGQRALAPSPHDRIIADGESPHLGDIPQVRRTSGQELDDSFLSFS
PKTKNSPRSESLSNSDSNDAFVSSKTNKKLPTFDIGDSNSSWKTPGLDISYGSNCPAPLR
AQRSEKQTASSGLRWVPLISEDTLSYPPSSITPKDQDGYRGDMDESDSDFQNVSSRHHHK
HHRKLSKSRKKNALNPGKHRTGIGILQAKPSDSSEEDFDLSFSMHPSSSEKSRQKLRSIS
NTSPASSNSPLHTHINVTEPKEHETDTDFKEPINKPSGPKNVRAVGGILGGLKCEPDVSI
PPFYSNTTDGNKSHDNFFEKFSFLNESRDESPPYSHKVHDNIPLLQNRFPPPEMMSFRAE
PFQSHSIFPYGSIGSWQMPHHTSALPSILPNRFAMPVYYQYPPPPPYRKDRPSGAFISNE
ERHHPSPPPMPDSTLSPESFLPSSASVAVQAQAESLKVPDMLDETNLTQKSSKKISHLTD
VPDEGDNEWEVVAGSGNEVQLETNSDDERRRRRRKKKKKKKKRRRLRFQMVTTLKRKAFH
RPLVYYQNRFMVLLFHEDNLQIIKPILR
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgttaaaaatcacacatctgccaagaacgaacaaactaaaaaatcaggtatg
agaattccgagtaccggtgataataatttcggcaatgatgacacgaaaatttcaagtgga
tcgtctggttcgactgtggccctctcaacaagcggaaaaaatggccctgtggattccaat
acggataatgaaagaagaactcgtcgtagtcggcattctactacgatcaagtccgttaat
cttaagttgaatactgatttggcaacaaaaaaggattcggcaaaaccggaatcaccaaat
gctccaactgcttatctaaacagtgtcatgaatacgctcgtctctgaaaatgcttcttct
cccgcacctgacaaattaacttcaggaaatggacaaacaagtaatggtggtagtttaaat
atctttaaaagttctcaaaaaagaaaaaataggaatcaagaaatcggaagtcatcataaa
ccagcggaggtttttcgaaaagatcttataagtgctatgaagattcctgatacatctcaa
ctcctttctgaagaatattgggtgatgaaagattcttggagaatggaatgggagaagggg
gttcaggttcccgttaatgcagaaggtctgcctggcataaaagttgacacagtaccgaag
gatataagaggagattttcgaatgccaagaaagttcataaaaacgacgcctgacgttggt
gatagggatacagttaatctaaacgttcttgctgattctacatgccgatatgatttggac
gaagttgacgtctcatggttacaagttattaatgaagaaagagaatgtttgggttctact
gctcttgatgaatttacaatggaaattataatggaggaattagaaacacagtgtcacgaa
aacatgcaacttgctatcaaaactaaggaaggtctcggcatagaatacgatgagaatatt
gtttgtgacgtttgcagatctcctgattgcgaagaaggaaacgaaatggtattttgtgat
ggatgtaacttatgtgttcatcaggcatgttatggaattctcaaggtaccagatggtagt
tggttatgcaaaccttgcgctctcggcattcgtggttctgctgtttgtatattgtgtngg
aaaaaaggcggagcaatgaaaagcaccaaatctggtcgcaagtgggcgcatatgagttgt
gcattgtggattcctgaaattaatatcgcagatccggacagaatggaacctatcacaaag
gtctctcatattccgtcatctcgttgggccttggtttgcacagtttgcaaagaacggaac
ataggtgcttgtatacaatgtagcgttagacattgcgttactgcgtatcatgtgacttgt
gctatggaaaatggatttgacatgataacagattgcctatcacccaactcaccattgagt
acaggagagagttctatcgttttcaggtcattttgtcagaaacacagtagaaattccaaa
aagaaattagaaaattcacctgggaagaaaacggaagaagaaaaacgaagtgatagacaa
aaaagaattgcggaattagaggaagatttttacacattggttaaaagcgacggggttgcc
agtgccttgaatatttcacctgatacagcaactgaagttttagaatattggaaattgaaa
agaaaagcaaatttcaatcgacctcttttgaccccaaaacaagaagaaggaaaagcattg
gcagaagctgctgaaactggattgcaaagacgattgagaatgttcactcatctgaggcaa
gatcttgaacgtgtcagaaatctctgttacatgattggaaaacgtgaaaaaatgaaacga
tcttctgttaagcttatgtctaatgtctttctagcccagattcactacgtggaatacaga
atgtctcagagttcttattttgaccccaaaatacttttatcttcattacccacatgtgga
aataaacaaatactcgatcaagcgaaaaaagaaaccatggaattattgatgacaccagaa
tggtctcaaagggatgaaagccgatccaattcaccttcaaatattgagtatgttaacact
tcaaagaaaaaagatgaaaaagtagttgccagtaaaaatgatgatgccgaaagtgatgtt
tcagacagacctcgaccacttccaaagtcttcagctaccgttactcaaattacctcactt
aaagataaaccatcaaactcaaaaatggagaacaaaagttcaaattcacaaaaacaagga
gatacgaggaaaaatggattagtagcagatatcaaagtagaatacagaaagggttcaaat
gagggtgtcccattcagagatgacgcactgaaacaaaaaattcttgatgataacgatttt
aaaaaacattcgaagaaaatgactttggaaacgaaatctgaagtatcaaaaacgtttgac
cctaaatcgaacaaaaatctacgtcgaagttcgcaagaatcagagtcacggagaaggtcc
cattcaaatttacgcggcagagagaaatcagactcaaaaaatgattttaccaagaaagtg
caagaaaaatcgaactctgataataaagtacgacataaatattcaagcgaaaagcgattc
gaatcgaaaaaacatcgaacaacgtcatcatcagatggtcgtattgacactgtgaaatat
aatgaaaaatcaggaaaaattaacgaggagattcgtacaagtagagcgagattaaagcac
gcacaacttgaatcgcctgatatttctgctcctaattctccaaatgtgcagtcaagtaca
atctcgaaagatgtttctgagaatcgaagatctgcagatgaaaccaaagacttgattgac
aatccatctttaataaataagaaacgtaaaatgtcatcaacgacagccgacaatgagaga
agtacaactgaacgaggcgataaaaattctcggaaaatgctgcgaaggtcatctagaaat
ttggacttctctaattcggaagattcggatattgatagcttgagatctttgaaacgggga
atgacgattatgacagaaacgatttcagaaactaagagaattagtgtggaagaagactcc
tgggatgacaaaagccaacggaagcgtacatggtccggtagtggcgaccaacctccgtca
ccgtctaaatcaaagaaaagacgcaaagagagcacacaaagtgtcaaagatttgaagcaa
agttccacaaagagacccacttcgcctatgcaacagaacagctctgaggattttacagat
ggtgaatcagcacagtcaagggcatcgtctcaaaacaaaggccgtacgagaaaaccaaca
tctggatccttctcaccttttattaaggaacgtaggagatcaagtgctaatgaaaattta
tctcctgttgtgaaaaagcctctttctaaacatcaacaggcaaaaaacggacaacgagct
cttgcaccatcaccacacgatcgaataatcgccgacggcgaatcaccgcaccttggcgat
attccccaagttcgacggacgtctgggcaagagctcgatgatagttttctcagtttttca
cccaaaacaaaaaattctccgagaagtgaatcgctatcgaattcagactctaacgatgca
ttcgtcagttctaaaacaaacaaaaaactgccaactttcgatatcggagattcaaattca
tcttggaaaacaccaggtctcgatataagttacggtagcaactgccctgctcctttaaga
gcacagcgcagcgaaaaacaaactgcttcatcaggtttacgttgggttcctttaatatcc
gaagacactctatcatatccaccgagttcgataactccaaaagaccaagatggttaccgt
ggcgatatggatgaatcagactccgattttcaaaatgtgtcgtctcgtcaccatcataaa
catcatcggaaattatctaaatcacggaaaaagaatgcactgaatccaggaaaacataga
actggtatcggaattttacaagctaaaccttccgattcgagcgaagaagatttcgatttg
tcattctcgatgcatccatcgtcaagtgaaaagtctcgacaaaagttacgttcgattagc
aacacgagtcctgcttcttcgaattctccgttacatactcatataaacgttactgagcca
aaagaacatgaaactgacactgattttaaagagcccataaataagccaagtgggccaaaa
aacgtgagagccgtcggtggtatcctaggcgggctaaagtgcgagcctgatgtatctatt
ccgcctttttattctaataccaccgacggcaataaatcccatgacaattttttcgaaaaa
ttttcttttttaaatgaatcgagagatgagtcgccaccgtattcacacaaagtacatgat
aatataccactccttcaaaatcgatttcccccgcctgaaatgatgtccttcagagcagaa
ccctttcaaagtcattcaatatttccatatgggtctattggttcgtggcagatgccacat
catacgtcagcactgccttctatattacctaatcgatttgcaatgcctgtttactatcaa
tacccaccgccgccaccgtaccgtaaagatagacccagtggcgctttcatttctaatgaa
gaaaggcaccacccttctcctccaccgatgccagactcgactttatcgccagaatctttc
ttgccgtcgtctgcgtctgtagctgtccaagcacaggcagaatcattaaaagtgccagat
atgctcgatgaaacaaatttgacacagaaatcgtcaaagaaaatttcgcacttgacggat
gtgcccgatgaaggtgataatgagtgggaagtagtagctgggagcggaaacgaagtacaa
ttagaaactaacagcgatgacgagagacgacgtcgtagacgcaagaaaaagaaaaagaag
aaaaaacggcgaaggttgcgtttccagatggttacgactctgaaaagaaaggcatttcat
cgccctctagtgtattaccagaaccgattcatggtgctattgttccacgaggacaatcta
caaattataaagccaattctccgatga
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