Styela clava (leathery sea squirt): 120332889
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Entry
120332889 CDS
T07291
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04517
IgSF CAM signaling
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120332889
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120332889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120332889
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120332889
Intermediate filaments
Intermediate filament-binding proteins
120332889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SR-25
DUF2004
Motif
Other DBs
NCBI-GeneID:
120332889
NCBI-ProteinID:
XP_039256152
LinkDB
All DBs
Position
Unknown
AA seq
2713 aa
AA seq
DB search
MSVSLAKMEPFEREERLNVTSLTPEQLKQQGFVVVEESTTEFKPTTFQQIDSSGKGEIHQ
YRTTTTTVTQRKTTTTNQQGEQSIVTSEYHSSDPVTLEQFSTPSNSGSSFASFHGSLSPP
AEQTADRRVYITTTTQKSSTNSGRVFETDIDGSTDVKKSYVISKTGAIEQSQYQQQQQQQ
QGQQIYNQQFVITPGAQLTQAEVDKLMMEDSQYSMEQFVDTRWDKVQYEEEEDLDNSSGR
LFERSRIKALADEREAVQKKTFTKWVNSHLQRVSLRIQDLYMDLRDGKNLMKLLEVLSGE
KLPKPTRGKMRIHCLENTAKALQFLKDKRVHLENMGPHDIVDGNHRLILGLIWTIILRFQ
IQDISVETEDNRETRSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIIHKHRPD
LIEYEKLKKTNAMGNLHNAFNVAEQKLGLTKLLDPEDVAVDHPDEKSIITYVVTYYHYFS
KMKAIAVEGKRIGKVLESVIESNEMVDKYDSITSDLLEWIEQTIMILSDRNFANSLAGVQ
QQLKAFNSYRTKEKPGKFEEKGNLEVLLFTLQSKMRANNQKPYTPKEGKLVSDINKAWEN
LEKAEHNRELALRNELIRQERLEQLASRFDRKAAMRETWLSDNQKLVSQEETEMKRDMDN
FGFDLPAVEAATKKHEAIETDVKAYEERVQAVIDVANELESEKYHDIKRINARKENILQL
WEYLLELLQGRRARLELNVELQQMFQEMLSLVDWMEEMKNQLESEDYGQHLLGVEDLYQK
HTLLEQDIAVHGERVKTLEAQSMKFIEPREDGYQACEPTVVEDRRNHVTATYDELLKLAA
RRHAKLDESRRLHQFFAEMSEETAWCREKESVLTSDDIGRDLTSVQSLLNKHKALEDEMA
GRKMIKDQSIKAGELLLEQEHFASDEIRSRISEVEQQWENLDDLAKERRKKLEQANDLYQ
FLADADDVDIWLVDTLRLVSTDDCGRDEASVQTLLKKHNQVQTELKDFASQIQAMHEQAE
KLPEHDRESIEVQERLRSIDNRYKELQDLSKQRKEKLIDARSLYKFFSEADTCLVWIDEK
EQVLRSLSIPDNIEDMELIQHRFDGYENEINKHAPQIAIVNQVARGLLHSQHPNSDQIAV
KQNDLNARWNELRALLDLRREALSSAQGIQSFQLECDETKTWIKEKSRLVGSTEDLTNDL
AGVMALQRKLSSMERDLAAIQAKLDNLQDEADKLAAEHPEEADDIRKKFDEITNVWKELK
ELLKKREDSLGEAGNLQKFLQNLDDFQAWLTKTQTAIASEDMPQTLPEAEKLLQQHTAIK
AEIDNYEDDYQRIKETGAKVTEGKEQDPQYMFLAQRLQALDQGWDELQQMWENRNKFLTQ
AHQYQTFVRDAKQAEQLLSNQEYALASTRAQASAVSPVEEEDGQETVDAVAARGPVASPD
VAEEALKKHEAFVASMAANDERINAVLRSAETLSDPDLEHYAADKISERAEKVDERQKKN
KHEAEEVMELLQENLSMQKFFADCEDLNKWINEKMLTAKDATYDDARNLHSKWQKHQAFA
AELAANKDRLTQLEKEGDKLAEAKPERTDEIETRLDELRKKWAELESSTASKEKTLFEAH
KSELFAQTCEDLEKFVTQMEGQLASEEYGKDLASVNALLKNHSTNEDEVEVRIQEVQELE
SQANTLRDEGSDVDEMDQKRNEVKNRLEELIEPLNKRKQMLGNSKQLHQFYRDVEDEKMW
IDEKLPLATSVEHGASLQEVQSLQKKNQSLKSEIDGHEPRIEAVCARGQQMATEDNPHSD
KINDKIHDLKDKWEVLSEEVEARKNRLEEAEKAQRYYFDAAEAEQWMGEQELYMMSEEKA
KDRQSATNMLKKHLVQEQSIEDYAETIQVLSKTSRKLAEAEHPESEQITARQVQVDKMYA
GLKDLSSERRHRLEERCALFKFNHEIDDLEQWIAEREVVAASQELGQDYQHVTTLQEQFQ
VFRRDTIKTGDERVNEANQVADKLIDSGHVDAVTIAGWKDRINEAWADLLELIETRVQML
AASYALHKFYHDSEETLARIEEKKKQIPEELGGDYLTVEDYQRKHEIFTQDIQAIGTQVK
TITATGNGLTSAYAGDQRHQIETRVSDVQKAWRDLLSAVDIRRGALVDTHDKHRFFNMVR
DVMAWMSIVIRQIDSQEKPKDVSGVELAMTAHQGIKSEIDARTGTYEECLDLGEELLKRN
HYASEEIKAKLTEVKAMRNDLVDKWQERWEWLELILEVYQFAHDASVCEAWLSQQQGMAR
GDPKTEAERSIADVEQLLRKLDGFEKAAVPWESRFGALNKMTALEVREIEKEKERKVEEE
RKRREEEEERERKRIEEEEEAERLRKEAELAAQQAQPLVNGHHEEEDVPVVEVMVQQQAP
VINGDDTGGAGDAAVVHDESADTLDVSVSIEKHEGHLQRKQEVDAEGKKASNRSSRRSSS
SSSSSSSSSSSDEKNKKGKKKPQEKQKKVPVPAVRKQPQPTEKRVEEQPKQQIQPQKEER
KPRSKSAIEPKKKDRIIDPRPERHSDDEGVSLDKETPVKMRQKPSTESEPFSGVLQRKSV
MFTPSKKASNRSWNHVYCSISDKHLRFYKDSKSAKADTLFHGESPIDLKDAKCDVASDYK
KKKHVFRLKLPTGLEYLFQAKDDNEMQNWISRLQNLDSSINSGVSTPTRTSINAEPSPKG
KKRRSLLKGGKKK
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttctttagccaaaatggagccgtttgaaagagaagagcgtctcaatgtgacg
tctttgactccagaacaactgaaacaacaaggattcgtcgtcgttgaagaatcaaccact
gagtttaaaccaacaacctttcaacagattgactcatcaggaaaaggggaaatccatcag
tatcggacaacaactacaacagtaacacagcgaaaaaccacgacaaccaatcaacagggt
gaacaaagtattgtgacatcagaataccattcttctgatccggtcacacttgaacaattt
tcgacaccaagtaattctggaagttcatttgcgtctttccacggatctctatcgcctcct
gctgaacagacggcagaccgtcgtgtctacatcactaccaccacacagaaatctagtaca
aacagtggccgagtatttgagactgatattgacggatctactgatgtgaagaaaagttat
gttatttcaaaaactggggcaatagaacagagtcaatatcaacaacaacaacaacaacag
caaggacaacagatttataaccaacaatttgtcatcacacctggtgctcagttaactcaa
gcagaagttgacaaactcatgatggaggacagtcaatacagcatggaacaatttgttgat
acaagatgggacaaagtacaatatgaagaagaagaagatttagacaacagttcaggaaga
ttgtttgaaagatcaagaatcaaggctctcgcagacgaacgtgaagccgtacagaagaag
actttcacaaaatgggtgaattcacatttgcagagagtttcactcagaatacaagatctt
tacatggatctcagagatggaaagaatttgatgaaattattagaagttttgtcaggagaa
aaactgcccaaaccaactagagggaaaatgcgaatccattgtttggagaacacagcgaaa
gctttacaatttctcaaagacaagcgagtgcatcttgagaacatgggacctcatgatatc
gtcgatggaaaccatagacttattttgggactaatttggacaattattctcagattccag
attcaagacatcagtgtcgagaccgaagacaacagggagacaagatcagctaaagatgcc
ttgttgctttggtgccagatgaagactgctggatacccgaacgttaacgtgcataatttt
accactagctggagagatgggctcgcattcaacgctatcattcataaacacagacctgac
cttattgaatatgaaaaactgaagaaaacaaatgcaatgggaaacctacacaatgcgttc
aatgttgccgaacaaaaacttggactcactaaactgctagatcctgaagatgttgctgtt
gatcatccagatgagaaatctatcattacctatgttgttacatattatcattatttctca
aagatgaaggctatcgctgtggagggaaaaagaattggaaaggttcttgaaagtgttata
gaaagcaatgaaatggttgacaagtatgattccataacctctgacctcttggaatggatt
gaacaaaccatcatgattctgagtgacagaaactttgcaaattcattggcaggcgttcaa
cagcaactcaaagctttcaatagctatcgaactaaagaaaagcccggtaaattcgaagaa
aaaggaaatttggaagttttattgttcacgcttcagagcaaaatgagagcaaacaaccag
aagccttacacacctaaggaaggaaaactagtttctgatattaataaggcctgggaaaat
cttgagaaggcagaacataaccgagaacttgccttgagaaacgaacttattcgtcaagaa
cgtttggagcaactcgcaagcagatttgatagaaaagcagcaatgagagagacctggctc
agtgacaatcagaaacttgtgtcacaggaagagactgaaatgaagagagatatggacaat
tttgggttcgatttaccggcggtggaagcagctactaagaagcacgaagcgatcgaaaca
gacgtcaaagcttacgaagaaagagtacaagctgttattgatgtcgcaaatgaattggaa
tcggagaaatatcatgatatcaaaagaatcaatgcaagaaaagagaacattcttcaactt
tgggaatatttgcttgagctcttgcaaggacgccgagctcgtctcgagttgaatgtcgaa
cttcaacaaatgtttcaagaaatgttgtctcttgtggattggatggaagaaatgaagaac
cagctggaatcagaagattacggccaacatctgttgggagttgaagacttgtaccagaaa
catacattactcgagcaagacattgctgtgcacggggaaagagttaaaacattggaggcg
cagagcatgaagtttatagaaccaagagaggatggttaccaagcttgtgaaccaactgtt
gtcgaagaccgtcgaaaccatgttacagcaacatatgacgaacttctaaaactcgcagcg
agacgacacgccaaacttgatgaatctcgaagactgcatcaattcttcgcggaaatgtca
gaagagactgcttggtgccgagagaaagaaagcgtcctgacttctgatgatatcggacgt
gacttgacaagtgttcaatcgcttctcaataaacataaggctttagaagatgagatggca
ggccgtaaaatgatcaaggaccaatctatcaaagcaggagaacttttgctcgaacaagaa
cattttgcctcggacgaaatccggtctcgcatcagcgaagttgagcaacaatgggaaaac
ttggatgatcttgcaaaggaacgtcgcaagaagttggaacaagcaaatgatttataccag
ttcctagcagatgctgatgatgtcgacatctggctggtcgacacgttgcgtctagtttca
acagatgattgcggacgtgacgaagcctcagttcagacattgttgaaaaaacataaccaa
gtgcagactgagttaaaggattttgcgtcacagatacaggcaatgcatgaacaggctgaa
aagcttcctgaacacgatcgagaatcgatcgaagtccaagaacgtttgagaagtatcgac
aatagatacaaagaactacaggatctttctaaacaaagaaaagaaaaactcattgatgcc
agatccctttacaagttcttcagtgaggcagatacttgtcttgtatggattgatgagaaa
gaacaagtcctgagatctcttagtattcctgataatatagaagatatggaattgattcaa
catagatttgatgggtacgagaatgaaatcaacaaacatgctccacagatagccattgtg
aatcaggttgccagaggattgctacattcccaacatcctaactctgatcagattgcggta
aaacaaaacgatttaaatgcaagatggaatgagcttcgagctctccttgatctacgccga
gaagctttatcttctgcgcaaggaattcaaagtttccaacttgagtgtgatgaaacaaag
acctggataaaagagaagtcacgattggtcggttcaactgaggatttaaccaatgatctt
gcaggagtaatggctctacaaagaaagctgtcgagcatggaaagagatttggctgccatt
caggcaaaactggacaacctacaggatgaagcggataaacttgcggcagaacatcctgaa
gaggctgatgatataagaaagaaattcgacgaaatcacaaacgtatggaaagaattgaag
gaattactgaaaaagagggaagactccctcggagaagcaggaaatctccagaaattcttg
cagaatttggatgatttccaggcctggcttacaaagacccaaactgccattgcatcagag
gatatgccacaaactttgccggaagctgagaagttactgcaacaacatacagctattaaa
gcagagatagacaattatgaggatgattatcagcgcatcaaagaaacaggagccaaagtt
actgaaggaaaagaacaagatcctcagtatatgttcttggcacaaagattgcaggcattg
gaccaaggttgggatgaactacagcaaatgtgggaaaacagaaacaaattcctcactcaa
gctcatcaatatcagacctttgtgagagacgcgaaacaggctgaacaacttctcagtaat
caagaatatgctcttgcaagcactcgagctcaggcatcagcagtgtcccctgtagaagaa
gaagatggtcaggagactgtcgacgctgtcgctgcccgaggccctgttgcatcaccagat
gtcgctgaagaggcattgaaaaagcatgaagcgtttgtcgcttctatggcagctaatgat
gagagaattaacgctgtgctaagatctgcagaaactctctcagacccagatctagaacat
tatgctgccgataaaatatctgagcgagcggaaaaagttgacgagagacagaagaagaat
aaacatgaggcagaagaggttatggaattgttacaggaaaatctctcgatgcaaaaattc
tttgctgattgtgaagacctgaataaatggataaatgaaaaaatgttgacagcgaaagac
gctacgtatgatgacgcaagaaatttgcactccaagtggcaaaaacatcaggctttcgct
gcagaacttgcggccaacaaagacagactcacacaattagaaaaagaaggtgacaagctc
gctgaagcaaaaccagaacgaacagatgaaattgaaacccgattggatgaattacgtaaa
aagtgggcggagcttgaatctagcaccgcctccaaagagaagactttgtttgaagctcac
aaatctgaattgtttgctcagacttgtgaggatcttgagaaatttgtcacacaaatggaa
ggccagcttgcttcagaggaatacggaaaagatctggcgagtgttaacgctttgttgaaa
aatcattccacaaatgaagatgaagtcgaagtaagaatacaagaagtacaggaactggaa
agccaagcgaacactctccgagatgaaggcagtgatgttgatgaaatggatcaaaaacga
aacgaagttaagaatcgtcttgaagaattgattgaacctttgaacaagagaaaacaaatg
ctgggcaatagcaaacaacttcatcagttctatagagatgtagaagatgaaaagatgtgg
atcgatgagaaactaccactggcaacctctgtagaacatggtgccagtttgcaggaagtc
caatctctacagaagaaaaatcagtctctgaagtcagaaattgatggacatgaacctcgc
attgaagcggtatgtgcacgaggccagcagatggcaacagaggacaacccacattctgat
aagataaatgataagatacacgacctcaaggataaatgggaagtcctgtcagaagaagtc
gaagctcgcaaaaacagacttgaagaggccgaaaaggctcagcgttattacttcgatgcg
gcggaagccgagcaatggatgggagaacaagaattgtacatgatgtccgaggaaaaggca
aaggatcgtcaaagtgcaaccaacatgctaaagaaacatttggttcaagaacagagcatt
gaggattatgctgaaacaatacaagtactttcaaaaacaagcagaaaactcgctgaagcg
gaacatccagaaagtgaacaaatcacagccagacaagtccaagtcgataagatgtacgct
ggactaaaagatctttcttctgagcgtcgacatcgtctcgaagaacgctgcgcactgttt
aaatttaaccatgaaattgatgaccttgagcagtggatcgctgaacgagaggtcgtggct
gcgtcacaagaacttggacaggattaccaacatgtcactacgctacaagaacagttccaa
gttttccgtcgcgataccatcaagactggtgatgagagagttaatgaagcgaaccaagtc
gcagacaaacttatcgactccggtcatgttgatgccgtaacaattgcaggatggaaagat
agaattaatgaggcttgggccgatctattggaattgatagaaacaagagtacagatgtta
gcggcctcctacgccttgcataaattttaccacgattctgaagaaacacttgccagaatt
gaagagaagaaaaaacaaattccagaagaattaggaggtgattacctgacggttgaagat
tatcaaagaaaacatgaaatattcacacaggatattcaagcaattggaacacaggtgaaa
accatcactgccaccgggaacggacttacttcagcttacgcaggagatcaacgtcaccaa
atcgagactcgtgtttctgatgtgcaaaaagcatggcgcgatctcctcagcgctgtcgat
attcgccgtggcgctttggtagatactcacgacaaacacagattctttaacatggttcgt
gatgtcatggcgtggatgtcaattgttatcaggcagattgactctcaggaaaaaccaaag
gatgtatctggagttgagttagctatgactgcacatcaaggaataaaatcagaaattgac
gctcggactgggacttacgaggaatgtctagatctcggagaagagttattgaaacgtaac
cattacgcttcggaagaaatcaaagcaaaattaacggaagttaaagcaatgagaaatgat
ctggttgataaatggcaggaaagatgggaatggcttgaattaattcttgaagtctaccaa
tttgctcatgatgcgtcagtgtgtgaagcgtggttgtcacagcaacaaggaatggcccgt
ggcgaccccaaaactgaagctgagcgcagcatcgctgatgtggaacagttgctacggaaa
cttgatgggttcgagaaagctgcagttccttgggagagcagatttggcgctctgaataaa
atgactgctcttgaagtaagagaaattgaaaaagaaaaagagagaaaggttgaagaagag
cgaaaaaggagagaagaggaagaagagagagaaagaaagagaatagaagaagaggaggag
gcggagcgattgagaaaagaggcggagcttgctgcccaacaagcacaaccattggtcaat
ggacaccatgaagaagaagatgttccagtggtagaagtaatggtgcaacaacaggcaccg
gtgatcaatggtgatgacacagggggggctggagatgcagcggtggtacatgacgagtct
gctgatacactagatgtctctgtgagcatagaaaaacacgaaggtcatcttcaacggaaa
caagaagttgacgcagaaggaaagaaagctagtaacaggagcagtcggaggtctagctct
tcctcaagctcaagctcgtcttcaagttcatccgacgaaaagaacaaaaaaggaaaaaag
aaaccacaagaaaagcagaaaaaagtaccggtaccggcagttcggaagcaaccacagccg
acagaaaagagagtcgaagagcaaccaaaacaacaaatccaaccacaaaaagaagaaaga
aaaccgcgctcaaaatctgcgatcgagcctaaaaagaaagatcgaataattgatccaagg
ccagagcgtcactcagatgatgaaggcgtctctctcgataaagaaacaccagttaaaatg
cgacaaaaaccttcgacagaatctgaaccattctctggagttctacaacgaaaatctgtc
atgttcactccgtcgaaaaaggcctctaacaggtcctggaatcatgtatactgctctata
tcggataaacatctcagattttacaaagattcgaaaagtgcgaaggcagatactttattc
cacggagagtcaccgattgatttgaaggatgctaaatgtgatgttgcatctgactacaag
aagaagaaacatgtcttcagattgaaattaccaacaggattggaatatcttttccaagct
aaggatgataacgaaatgcaaaattggatttctcgtcttcaaaatctcgattcatcaata
aacagcggggttagtacgccaactcgtacgtcaataaacgccgaaccaagcccgaaagga
aagaaaagacgaagcctcttgaaaggcggaaaaaagaagtaa
DBGET
integrated database retrieval system
