Styela clava (leathery sea squirt): 120332976
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Entry
120332976 CDS
T07291
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120332976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120332976
Transporters [BR:
sclv02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
120332976
BRITE hierarchy
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
120332976
NCBI-ProteinID:
XP_039256257
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MIVSIPGLIAIVIFYLAVFIVGIVAAKLTTKRKSNLASETIMVGGRDIGAVVGFFTLTAS
WVGGDYINGLAEAVYTSHVGLMWALCIPIGYGLGLILVGLFFADNLRDKNYTTIIDPVQA
KLGRYMGAVVASVEIFSLIIYTGAILNALGGSLQIVAGLPRIGSVIISAAIALLYTTLGG
LYSVAYTDVLQLILIAGGLILCLPFAFNHEAVIDIADTAYGKTGWIGSWDSSSGGAYIDL
WLLSIFGGIPWQSVVQRVLAANSNRNAKLLCILSGFGTALIAIPPILIGAVGASANWTLT
SYMNGSGSSPLDEHDKRLILPIVLLYLTPPAVSFFGLGATAAAVMSSVDSTTLSCGSLFA
RNVYKNAIRRNASDREVVWAMRISFLVFIVISSVVALTVDSIFVLAYLSADFMYCLSLPQ
FVTVMYLDPNVYGALIGFIVGLILRLGGGEAMLDWKPWIHYPGGVNFPYKTFATIISFLA
ILVISRIAKFLFERGYIHPKYDILRSNLNNGGRSIILKKVNAAKNDYNADIPLPNVYPNI
HVIDADDR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagcattccaggtttgattgccattgtgattttttatcttgccgttttcatt
gttggtatcgttgcggcaaaattaactacaaaaagaaagtcaaatcttgcttcagaaacg
atcatggttggagggagagacattggtgctgtagtaggcttcttcactttgactgcttcg
tgggtcggcggtgattatataaacggattagccgaagctgtatacacgtcccatgttggt
ttgatgtgggcattgtgcatcccgattggatatggtttaggattgattttagtcggatta
ttttttgccgataacttgcgtgataagaactacaccaccatcatcgatcccgttcaagct
aaacttggcaggtacatgggagcagtagttgcctctgtagaaatattttctttaattata
tacacgggagccatattgaatgcccttggtggcagtttgcaaattgttgcagggttacca
agaataggatctgttattatatctgcagcaatcgcactactatacacaacgttgggtgga
ttgtattcagtagcatataccgatgtattgcaacttattttgatagccggaggcctgatt
ctttgtttaccttttgctttcaaccacgaagcggtaattgatatagcagatactgcttat
ggaaaaacaggatggattggatcttgggattcaagcagtggtggagcatacattgacttg
tggcttctatctatttttggtggtattccatggcaatccgttgtccaacgagttttagca
gcaaattcgaatcgaaatgccaaattactttgcatactcagtgggtttggtacagctttg
atcgcaataccacctatacttattggagccgttggagcatcggcaaattggactctcaca
tcttatatgaacggcagtggttcctctccactggacgagcatgacaaaagacttatttta
ccaatagtattactatatctgacacctcctgcagtatccttttttggcttgggtgctacg
gcggcagcggtaatgtcttcagttgactcaacaactttgtcatgtggaagcctttttgcg
agaaacgtttacaaaaatgcaataagacgaaatgcatctgatcgtgaagttgtctgggcg
atgagaatatcgttccttgtatttatcgtaatatcttcagtagtcgcactgaccgttgat
tcaatatttgtacttgcatatctgtcagcggatttcatgtattgtctctctctaccccag
tttgttactgtcatgtatcttgaccctaacgtttatggagcattgattggatttattgtt
ggactgattttgcgcttgggaggaggggaggcaatgttggactggaaaccctggattcac
taccctgggggtgtcaatttcccatacaaaacgtttgctacaattatttcgtttctcgcc
atactagtaatatctcgtattgctaagtttctatttgaaagaggatatatacacccaaaa
tatgatattctaagaagcaatcttaataacggtggaaggagtattattctaaagaaagtg
aatgctgccaaaaacgactacaatgcggatatacctcttccaaatgtatatcctaatatt
cacgtgattgatgccgatgatagataa
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