Styela clava (leathery sea squirt): 120333168
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Entry
120333168 CDS
T07291
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120333168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120333168
Spliceosome [BR:
sclv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120333168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
120333168
NCBI-ProteinID:
XP_039256468
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MMHIGLHYESGDSRERGSLGLFQLRQSADQVSFVNLFGDLLLFWIIFGSKSTMKMALSRK
EADELKPQISGIVEKVLGFSDNSVVVAAIQCLQKDMDKGRIIEHLQPLMDKSAKKFVEEL
YTTVELSKTKKKSRKRKEDEVETAVTKKVRRFVEPDIPVALPAEPIAESPGMLTTQQIKN
MMEHARKQIEQRKEQLKMMDPADIRAQAEAAKISNGSEQQALIESSMTKAEKAAELQRKI
QEKLAARPGLLSAPPSTPEAMTSLIAKITGKAGAEESAPKPLILDDQGRTVDATGQLLNI
PQRVPTLKANIRAKKREEFRQKMLEKPEEESSSEVKTFYDPRVPQEGPTRQKRQFKFYDK
GRFVQIAQKIRTKTQLEKLQNEIAQAAKKTGIQQASKLALIAPKAVVESGQIPDLEWWDE
YLIPQENSIDTSEEKYHGITNLIEHPTQMDPPGEKKEVTMGLFLTKKERKKLRRLNRREA
MKDEQEKVRLGLAPAPEPKVKLSNLMRVLGNDAVQDPTKVEQHVRAQMAKRKREHEQANA
ARKLTTEQRKEKKMKKLKEDVSSGVHVAIYRVKSLRDPAKKFKIEANSNQLYMTGCVVLF
KDINVVVVEGGPKAQRKFQRLMMIRMKWADEKKWKRDEGEESGPNSCQLIWEGQSKSKNF
GPITVKQCLTELAAREFFKKHGVEHYWDLAHSTKILEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatatcggacttcattatgagtccggcgattcgcgggaacgcggcagcctcggt
ttgtttcagcttcgtcagtctgctgatcaggtttcgtttgttaatttgtttggagatttg
ttactgttttggattatattcggttctaaatcaactatgaaaatggcgttatcaagaaaa
gaagctgatgaattgaagcctcaaatcagtggaattgttgaaaaagtacttggtttctcc
gacaattctgttgtcgtggcagcaatccaatgtctacagaaggatatggacaaaggaaga
ataattgaacatctgcaacctctgatggataaatcagcaaaaaagtttgttgaggagttg
tatacaacagttgaactttctaaaacgaaaaagaaaagcagaaaaagaaaggaggatgaa
gttgaaacagcagtgactaagaaagttcgtcgttttgttgaaccagatattcctgttgct
cttcctgctgaacccatcgctgagagtcctggaatgctcaccactcaacagatcaaaaac
atgatggaacacgccagaaaacaaattgaacaaaggaaggaacaattgaaaatgatggat
ccagctgatatcagagctcaagctgaagcagctaagatttccaatggcagtgaacagcag
gctctgatagaaagttcaatgacaaaagctgaaaaagctgcagaattgcaaagaaaaata
caagaaaaattagcggctaggcctggactcttaagtgcaccaccttcgacccccgaagca
atgacatcactgattgctaaaatcacaggcaaagcaggcgcggaggaaagtgcaccaaag
ccacttatattagatgaccaaggaagaacagttgatgcaacagggcagttgctcaacatt
ccacaaagagttccaactttgaaggcaaacatcagagccaaaaagcgtgaagaatttcga
caaaaaatgctggagaagccggaagaagaatcttcatcagaagttaaaacgttttatgat
cccagagttccacaggaaggtccgacaagacagaaacgacaatttaaattctatgataaa
ggaagatttgtacaaattgcccaaaagataaggacaaagactcaactggaaaaattacaa
aatgagattgcacaagcagctaagaagacaggcatccagcaagcttcaaaacttgctctt
atcgcaccaaaagctgtagttgaatctggacaaatacctgacctcgagtggtgggacgag
tatctcatcccgcaagaaaattccattgacacatcagaagaaaaatatcatgggataaca
aatttgattgaacatcctacgcagatggatccaccaggtgaaaagaaagaggtcacgatg
ggtcttttcttaaccaagaaagaacgaaagaaattgagaagattgaacaggagggaggcc
atgaaagatgaacaggaaaaagttcgactcggacttgcgcccgctcctgaaccaaaagtg
aagctgtccaatctcatgcgcgtccttgggaacgatgcggtgcaagatccaactaaagtg
gaacaacatgtccgtgctcaaatggccaaaagaaagcgcgaacacgagcaagccaatgca
gcgagaaaattgacaactgaacagagaaaagaaaagaagatgaagaaattaaaggaggat
gtttcttcgggagtgcatgttgctatctacagagtcaaaagtctgcgagatccggcgaag
aaattcaaaatcgaagcgaacagtaatcaattatatatgacaggatgtgttgttttgttc
aaagatataaacgttgttgttgtggagggtgggccgaaggcgcaaagaaaatttcaaaga
ttaatgatgataagaatgaaatgggccgacgagaaaaagtggaagagagacgaaggcgaa
gagtccggccctaattcatgccagcttatatgggaaggccagtcaaagtcgaagaacttc
ggtccaataacagttaaacaatgtttaaccgaactggccgctcgagagtttttcaaaaaa
catggcgtcgaacattactgggatctcgctcactcgacgaaaattttagaagagtga
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