Styela clava (leathery sea squirt): 120333177
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Entry
120333177 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 3-like
KO
K22991
WD repeat-containing protein 45
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120333177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120333177
Membrane trafficking [BR:
sclv04131
]
Autophagy
Other autophagy associated proteins
Others
120333177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_Vps41
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120333177
NCBI-ProteinID:
XP_039256480
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSSLLHIAFNQDQGCFACGTTNGFRVYNADPLKEKKRQDFKNGGIACVEMLFRCNYLAVV
GGGATPSVSKNKVMIWDDLKKKVVIELLFSSDVRCVRLRRDRIVVALDRLIKVFTFTQNP
QSLHVFETAENPYGLCQLCPSSTNSILAFPARSLGQVQLVDLSNTEQPKMVTAHEASLSC
IALNLQGTRLATASQKGTLIRIFDTQTCDKLVELRRGSGNARIYCINFNVDSSFLCVSSD
HSTIHVFSCGDKLLLSPNLPTSNRSLAHAKFLPKYFSSQWSFCRFSIPTSSQSICAFGPE
SDSVIAVCGDGTYYKFSFNLKGECNREAFAHFLDITNADTTD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttgctgcacattgctttcaatcaggaccaagggtgttttgcttgtgggaca
acaaatggatttagggtttacaatgcggatcctttgaaggaaaagaaacgccaagacttt
aaaaatggcggaattgcatgtgttgagatgttatttcgttgcaattatttggcagttgtt
ggtggtggagctacccccagcgtatccaaaaataaagtcatgatatgggatgatttgaaa
aagaaagttgtcattgaacttctgttttcttctgatgttcgttgtgtaaggttacgacgc
gacagaattgttgttgcgcttgatcgccttattaaagttttcactttcacacagaaccca
cagtctttacatgtatttgaaacagcagaaaatccatacggactttgccaactttgcccc
agtagtacaaactcaattcttgcatttcctgcacgttccttgggtcaagtccagttagtc
gatctgtcaaatacagagcaaccaaaaatggtcacagcacatgaggcatctttatcgtgc
attgctcttaatttacaaggcaccagattagcaacagcatctcaaaaagggacactcatt
cgaatttttgacactcaaacgtgtgataaattagtggaattacggcgagggtctggaaat
gctagaatatactgcattaattttaacgttgattcaagctttttatgtgtatccagcgat
cacagtactatccatgtcttttcttgtggtgacaagctgctgctcagtcccaatctacca
acaagcaatcgaagtctcgcacacgcaaaatttctgccaaaatatttcagcagtcagtgg
agtttttgtcgtttcagtattcctacatcttcacaatcaatttgtgcgtttggtccagaa
tcagactctgtaatcgcagtttgtggagacggaacttactacaaattttctttcaacctg
aagggcgaatgcaatcgtgaagctttcgctcattttttggacattacaaatgctgatact
actgactaa
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