Styela clava (leathery sea squirt): 120333407
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Entry
120333407 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03040
Spliceosome
sclv04141
Protein processing in endoplasmic reticulum
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120333407
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120333407
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120333407
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120333407
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120333407
03009 Ribosome biogenesis [BR:
sclv03009
]
120333407
03110 Chaperones and folding catalysts [BR:
sclv03110
]
120333407
04131 Membrane trafficking [BR:
sclv04131
]
120333407
03051 Proteasome [BR:
sclv03051
]
120333407
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120333407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120333407
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120333407
Spliceosome [BR:
sclv03041
]
Complex B
Other components
Prp19 complex
120333407
Complex C
Prp19-CDC5 complex
120333407
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120333407
Chaperones and folding catalysts [BR:
sclv03110
]
Heat shock proteins
HSP70 / DNAK
120333407
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120333407
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120333407
Proteasome [BR:
sclv03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120333407
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120333407
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120333407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
PilM_2
DDR
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
120333407
NCBI-ProteinID:
XP_039256760
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNP
ANSVFDAKRLIGRKFTDSTVQSDMKHWPFEVINEGGKPKINVEYKGEQKKFFPEEISSMV
LTKMKETAEAYLGTPIKDVVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY
GLDKKSGSERSVLIFDLGGGTFDVSVLSIDDGIFEVKSTRGDTHLGGEDFDNRMVNHFIQ
EFKRKYKKDPSGNKRALRRLRTACERAKRTLSSSTQANIEIDSLFEGVDFYSSITRARFE
ELCSDLFRGTLDPVEQALRDAKIDKSKIDEIVLVGGSTRIPKIQKLLQDFFNGKELNKSI
NPDEAVAYGAAVQAAILSGDKSDEVKDLLLLDVAPLSLGIETAGGVMTALVKRNTTIPSK
QTQVFTTYADNQPGVLIQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDAN
GIMNVSAVDKSTGRENKITITNDKGRLSKEEIEKMVNDAEKYKEADDKEKDRIQAKNGLE
SYTYHVKASVEDEKIKEKISEEDKKTILDKCGEIITWLDNNQNAEKDEYDYQQKELEKVT
NPILTKLHQAGGPAPGGVPPQGASDQPGAGGPTIEEVD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgttggaattgacctcgggaccacatattcgtgtgtcggagtttttcaacat
ggaaaagtcgaaattattgcaaacgatcaaggaaatcgaactacgccaagttatgttgct
ttcaacgatacggaaagactcattggggatgcagcgaaaaaccaagtggcgatgaatcca
gcgaacagtgttttcgacgccaagagactcattggacgaaaattcaccgattcaacagta
caaagtgacatgaaacactggcctttcgaagtcatcaatgaaggaggaaaaccgaaaatc
aatgtggaatacaaaggcgaacagaagaaatttttcccagaagaaatcagttctatggta
ctgaccaaaatgaaagaaactgctgaggcatatttgggtacaccgataaaggacgtggta
gttacggtgcctgcctatttcaacgattctcaacgccaagccacaaaagacgccggtact
attgctggtttaaatgtcttgagaattatcaacgagccaacagctgcagcgatcgcttac
ggtctagacaagaaatcgggttctgagagaagcgtattgatattcgatctgggaggtggc
acgtttgacgtcagcgttttatctatcgatgacggaatctttgaagtaaaatcaactaga
ggcgatactcatcttggcggtgaagattttgataaccgaatggtaaatcacttcattcaa
gaattcaagcgaaaatataagaaagacccttctggcaacaaacgagcattgcgtcgactt
cgcactgcttgtgaaagagcaaagcgtacactctcatcttcaacacaagcaaatatcgaa
atcgattcactcttcgaaggtgttgatttctacagttcaattaccagagcgagatttgaa
gaactttgttctgatcttttccgaggaacattggatccggtcgaacaagccttgcgagat
gcgaaaatagataaaagcaaaatcgatgaaattgttcttgttggaggatcgaccagaata
ccgaagattcaaaaacttcttcaagatttcttcaacggaaaagaactcaacaaatccata
aatccggacgaagctgttgcatatggagccgcagtacaggcagccatcctgtctggtgac
aaatctgatgaggtcaaagatcttcttttgttggatgttgcgccattgtcacttggaatt
gaaacggctggtggagtaatgacagcgttagtgaaacgcaacacaacgatcccgtcgaaa
caaacacaggtcttcaccacgtacgcagataaccaacctggcgttctcatccaagtttat
gaaggtgaacgtgcgatgacgaaagacaacaacctgttgggaaagtttgatctaactggc
attcctccggctccgaggggtgttccacaaattgaagtgaccttcgatatcgacgcaaac
gggattatgaacgtatctgctgttgacaagagcaccggacgtgaaaacaaaatcacaatc
acaaatgacaaaggccgtttgagcaaagaggaaatcgagaaaatggtgaacgatgccgaa
aagtacaaggaagcagacgacaaagagaaagatcgtattcaagcgaagaatggtcttgaa
tcgtacacttatcatgtcaaagcttcagttgaagacgaaaaaatcaaagagaaaatttcc
gaagaggacaaaaagacaattctcgacaaatgtggggaaattattacgtggctcgacaat
aatcaaaacgctgagaaagacgagtatgattaccaacaaaaagaactcgagaaagttacg
aatcctattctgacaaaactgcaccaggccggagggcctgcgcccggaggggttccacca
caaggggcttcggatcagcctggtgctggcggtccaacaatcgaagaagttgattaa
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