Styela clava (leathery sea squirt): 120333419
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Entry
120333419 CDS
T07291
Name
(RefSeq) nucleoporin p58/p45-like
KO
K14307
nucleoporin p58/p45
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120333419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120333419
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120333419
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
PhaP_Bmeg
Vps53_N
PHM7_cyt
DUF713
Motif
Other DBs
NCBI-GeneID:
120333419
NCBI-ProteinID:
XP_039256773
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAFSFGNTGASKPGFSFGSSTATTKATGTVQPFGFGNATTSSAPSASTGFSFGNTSSQPA
KTTSSSLFGASANTTTSTGLGGSGFGGGFKLGGSTATTASGFLFGGNTGLSLGNTGGSLT
ATSTTGSAFGTSAATTSAPAFRGLGGVSSTASTSNQSDGNGNKNNGVGQALKEQQVPDEL
CKDVKDFENFVKKQKEGSNTIGKFSIRSLRKIQEEVSSLSYALGSVSSALHRNNAAVQKL
RSDFTEELRYIEIAKHTQDIPPSLQHDNIAPIKFFMNMLSEFESSMQIYRKQIEELENHL
SLTDQSINLTPQDIYVALCKMQESFIALAANLHSIHDQVKILKEQYLVYRRIVHNDTFDI
FAANKQKLTQEKSQKTSGLSPFNQLSNVAALAMASMVNQQSQQQQGPPQQGHLSTQPAGG
TGLFGGANKPIGTASLFGGGSTTTGSKFGGFSGFGSTTKPLSAGFGTSATQSTGLFGNTS
SLNTSAGLTFGGSAATGSTFELKRPPLGNKRGKK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagttttggtaatacgggtgcttcgaaaccgggattttcatttggatcgtca
acggcaacaacgaaagcaactggtacagttcagccttttggttttgggaatgctacaact
tcatctgctccgagtgcgagcaccggtttcagttttggaaatacatcgtcacaacctgcc
aaaacaacatcaagctcgctctttggtgcctccgctaacacaactacttcaactgggctg
ggtggatcaggatttggcggaggatttaagcttggtggatctacagcaacaacagcatca
ggtttcttatttggcggcaacaccggattatctcttgggaataccggtggcagtttaacg
gccacatcaaccacaggatcggcttttggcacaagcgcagcaactacatcggcacctgct
ttcagaggactcggaggtgtctcgtcgaccgccagcacaagtaatcaaagcgacggtaat
ggtaacaaaaataacggcgtaggacaagcgttgaaggaacagcaagtcccagatgaattg
tgcaaggatgttaaagattttgagaattttgtgaagaagcaaaaagaaggaagtaacacc
atcggtaaattttcaattcgatcacttcgtaaaatacaagaagaagtttcgtcactttct
tatgctctcggcagtgtttcatcagccttgcacaggaacaacgctgcagttcaaaagtta
cgttctgattttactgaagaattacgatacattgaaatagcgaaacatactcaagatatt
ccaccttcgttacaacacgataatattgctcctatcaagttttttatgaacatgttatca
gaatttgaatcaagtatgcaaatatatagaaaacaaattgaagaattagaaaatcatctc
agcttaaccgatcagtctatcaatttaacaccacaagatatttatgtggctttatgcaag
atgcaggaatcctttatcgcacttgcggctaatctacattctatacatgatcaagtcaag
attctcaaagaacaatatctggtttatcgaagaattgtacataatgatactttcgacatt
tttgctgcaaataaacagaagcttacgcaagaaaaatctcaaaagacttccggcttatct
ccgttcaaccaactcagtaatgttgctgctttagctatggcatcaatggttaatcagcaa
agtcaacagcaacagggaccacctcaacaaggtcatttgtccacacaaccagctggtggt
acaggactatttggcggagcaaacaaacctattggcactgcaagtttatttggtggtgga
tctacaaccactggatcaaagttcggaggttttagtgggtttggttcaactactaaaccc
ctcagtgcagggtttggcacatctgctacacaatccactggcttgttcggcaacacttca
tcactcaacacgagtgctggactcacttttggtggttctgctgccactggtagtacattt
gaattgaaacgtcctcctcttggcaataaacgtgggaagaaatga
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