Styela clava (leathery sea squirt): 120333713
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Entry
120333713 CDS
T07291
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120333713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120333713
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
90S particles
GTPase
120333713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
PduV-EutP
AAA_22
AAA
nSTAND3
AAA_14
DO-GTPase2
ABC_tran
FeoB_N
AAA_16
MobB
Motif
Other DBs
NCBI-GeneID:
120333713
NCBI-ProteinID:
XP_039256977
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MDVDVDNKPSKQHKVRKAGRKAEKRKLKEDNSREDATTKKKNPKAYAIQSVNKLAKSFHR
AQDIKTKKHHIPVVDRTPQVPPPVVVAIVGPPKVGKTTLLQCIIKNYTKQKLTNIQGPVT
VVSGKNRRLTIIECPNDISAMIDIAKIADLVLLLVDAGFGFEMETFEFLNICQVHGMPKI
MGVLTHLDAIDNAKKIKKTKKLLKHRFWTEIYQGAKLFYLSRMVYGEYQKMEIHNLCRFI
SVMKFRPLIWRSTHSYLLTDRMEDLTDPEKIRQDSICNRNISLYGYVRGMPLKNHSSIHI
PGVGDQIIKNISFLPDPCPLPEKGEKRQRRTLDVKERLIYAPMSGVGGIIYDKDAVYIDV
QSSTQRNNGQVGEIETIDNEIVDDSMIGTMTLSKQTIDHKMEKSQFSLLEGMKPITNNEA
ESMVEMPMEEKTFDVETNRVRRRAVFSIKDGEQQDSTSNDDEEGYQSGDSDDESCNESEN
EIEEPNGISESKLKWKENLKLKAQNLYIHRQKMMKNLPKLVYGKIEIKSDTSESEEDEKV
AGDLFVVKRNMKAKKNTKDNKDCSITLRRQHGDENSEDIRRSISDCFVTGDWNQDEDASH
LLQEDENLYGDFEDLETGQSFTSGAKDNESDSDDVDTVRIKKPDDREARLREKRLARKRK
MKEIFDREYDVSQENGEVTTASGSLFDSVKTELAEQAKLNRAEFEDMDDATRVQYEGYRP
GMYVRIELHDIPCEFVKYFNPTYPVIAGGLLATEIQTGFIRVRVKKHRWYPKILKTRNPM
IFSMGWRRFQSLPMYYMEDHNLRQRYLKYTPQNMHCWAVMWGPLCPQGTGFLAIQALANR
DVPNFRITASGTILESDKSTKLVKKLKLIGYPYKIFKNTCFVKGMFNSSLEVAKFEGAAI
RTVSGIRGQIKRAVTDGPNNSGGSEAGSFRASFEDRILMSDIVFCRTWCPVDVPKFFLNC
ANLMLPDKDSWSAMKTVGQLRHEKDQKLQPNEDSLYGPIERETRVFNPVVIPKKLQKELP
YKVRPKLRREKIESRQEGMMKVAIVREPKDRKIVELMTALRALDHDKKKKTKQEKRVKYL
KHREMLEKEEIKNKWKHKEAKRKAYAMLNQKQKKKR
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgtagataataaaccatcaaaacaacacaaagtaagaaaagctggcagg
aaagcagaaaaaaggaaactgaaggaagacaacagcagagaggatgcaactactaaaaag
aaaaacccaaaagcgtatgcaatccaaagtgttaacaaattagccaagtcgtttcatcgg
gcacaagacatcaaaacgaaaaaacatcatatacctgtcgttgatagaaccccacaggtg
ccaccacctgtcgttgttgctatagttggtccaccaaaggttggtaaaacgactttgtta
caatgtattataaagaattatacaaagcaaaaactgactaatattcaaggaccagtcaca
gtcgtatctggtaaaaatcgtcgactcacaattatcgaatgtccgaacgacattagtgct
atgattgatattgcaaaaattgcggacttggtacttttacttgttgatgcaggatttgga
tttgaaatggaaacttttgaatttttgaatatctgccaagtgcatggtatgccaaaaata
atgggtgttttgactcatttggatgcaattgacaatgcgaagaaaataaagaaaacaaaa
aaattattaaaacatagattttggactgaaatataccaaggtgccaagttgttttattta
agcagaatggtctatggtgaatatcaaaaaatggaaattcataatttatgtcgatttatc
agcgtaatgaagttcagacctttgatatggagatcaacacattcatatttattaactgat
agaatggaagacctaaccgatcctgaaaaaattcgacaagattctatttgtaatcggaat
atatcattgtatggttatgtccgtggaatgccactaaaaaatcattcatcaattcatatt
cctggtgtcggggatcaaattattaaaaatatctcatttcttccggacccgtgccctttg
cccgaaaagggagaaaaaagacaaaggcgtactctggatgtaaaagaaagacttatttat
gctcctatgtctggagttggtggaattatttatgataaggatgctgtttatattgatgtg
caaagctcgacacaaaggaataatggacaagtcggtgaaatagaaactattgataacgaa
atagtagatgattcaatgattggaacaatgacattatcaaaacaaaccattgatcataaa
atggaaaaaagtcaattttcacttctggagggaatgaaaccaattacgaacaacgaagca
gaaagtatggttgaaatgcctatggaagaaaaaacatttgatgttgaaacaaatcgtgtt
aggagaagagcagttttttctatcaaagatggtgaacagcaagattctacatcaaacgat
gatgaggaaggttatcaaagtggagattccgatgatgaaagttgtaacgaatctgaaaat
gaaatagaagaaccaaatggcatttctgaaagtaaattgaaatggaaagaaaatttgaaa
ttgaaagctcaaaatttgtacattcacaggcagaaaatgatgaaaaatcttcctaagttg
gtttatggtaaaattgaaatcaaatcagacacttctgagtccgaggaagatgaaaaagtc
gctggtgatttatttgtcgtcaaacggaatatgaaagcaaagaaaaatacgaaagacaat
aaagactgcagcataactttgcggcgacaacatggggatgaaaatagtgaagatatacgc
cgaagtatcagtgattgttttgtcacaggtgattggaatcaagatgaagacgcctctcac
ttattacaagaggatgaaaatttgtatggtgattttgaagatttggaaacaggacaatct
ttcacatctggagctaaagataatgaaagtgattctgatgatgttgatacagttagaatt
aagaaacccgatgaccgtgaagctagattgagagaaaaacgtcttgccagaaaacgaaaa
atgaaagaaatatttgatcgggaatatgacgtcagccaagaaaatggtgaagtaacaacc
gcaagtggaagccttttcgactctgtcaaaactgaactggctgaacaagcgaaattgaac
cgtgctgaatttgaagatatggatgacgcaactagagtacaatatgaaggctacagaccc
ggaatgtatgttcgcattgaactgcacgatattccttgtgagtttgtaaaatatttcaat
ccaacatacccagttatagcaggtggtttgttggcaactgaaattcaaacaggctttatc
agagttcgagttaaaaaacatcgctggtatccgaaaattttgaaaacacgtaatccaatg
atattttctatgggttggagaagatttcaatctttgccgatgtattatatggaagatcac
aatttgagacagagatatcttaaatatacaccacaaaatatgcattgttgggctgtaatg
tggggtcccctttgcccacaaggtacaggattcttagcaatccaagctcttgcaaataga
gacgttcctaattttagaatcactgcctctgggactattttagaatctgataaaagtaca
aaattggttaaaaaattgaagcttattggttatccatataagatatttaaaaatacctgt
tttgtgaaaggaatgttcaactcatctcttgaagttgctaaatttgagggagcagccatt
cgaactgtcagcggcatacgaggacagataaaaagagcggttactgatggcccgaacaat
agcggaggatccgaagccggatctttccgagcatctttcgaagatcgtatattgatgagt
gacatagtgttctgtcgtacctggtgtccagttgatgttccaaaatttttcttgaattgt
gcaaatttaatgttgcccgacaaagatagttggagtgcaatgaaaactgtcggacaactg
cgtcatgagaaagatcagaaattacaaccgaacgaagactccctttatggaccaatcgaa
agagaaactagggttttcaatcctgttgtaatacccaaaaaattacaaaaagaattacca
tataaagtaagaccgaagttacgaagagaaaaaatagaaagcagacaagaaggaatgatg
aaagttgcgattgtcagagaaccgaaagatagaaaaatagtcgaacttatgacagcattg
cgtgcacttgatcatgacaaaaagaaaaagaccaaacaagagaagagggtcaaatatctc
aagcacagagaaatgttagaaaaagaggaaatcaaaaataaatggaaacataaagaagca
aaaaggaaagcttacgcaatgctgaatcaaaaacagaagaagaaaagatag
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