Styela clava (leathery sea squirt): 120333762
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Entry
120333762 CDS
T07291
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120333762
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120333762
Membrane trafficking [BR:
sclv04131
]
Protein recycling
Others
Others
120333762
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120333762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
SNX17_FERM_C
SNX17-27-31_F1_FERM
FERM_N
RA_2
PDZ_2
FERM_M
SNX17-31_F2_FERM
LMWPc
RA
FAM167
Motif
Other DBs
NCBI-GeneID:
120333762
NCBI-ProteinID:
XP_039257055
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MAHDIKRVQKSADIYKGPRTVLIKKTDTGFGFNVRGQVSEGGQLKSINGVLYAPLQHVSA
ILEDGAAETAGVRPGDRILEVNEENVEGATHRQVVDLIKAGGDELKLTVISVPAKDAHRL
DPEDEFFYDYTDVITIRLDLPSFEHVEENGMKYVVYVITLSEKVVARRRYSEFLSLYTEL
EKIFTDFQFPKFPGKWPFQMSDQQLEKRRISLQNFIKNTFNIRVIMECDLVQDFLNLNSI
NLDYEAEKSKKSSKSADEPELHEYNADEELGSTKVSPQKAEVDTRQLNGGAKSKSNSTEE
QKPSEKVTETKKPAKPSIPTLKPNQISISLFDNSDIIMTIERQTTANDVLEHVFDKLGIP
ENKKIFFGLFCPTRENFFVKLRTDDLIVPKLKGRKKREVKIRKWLFSRNQESDVLSGDSK
ISEYVYQQAIEDVKQGHIKTTGRTLAQLKMLASQNKTSDYMEMVSQANDYNHVTFPHCPC
DSRKKGHVIVVASYETFKLYACSEEGELENQVIQFSWDEMKEWETEEEEESENRAFCFQY
QRGEKKPRWVKVFSEYCEYMKDCFERILEERKWSKEAEQEGDVSEGNTFSKQQVSSAEAE
DNSDDDDGGL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgatatcaaaagagttcagaaaagtgctgacatttacaaaggtcctcgtact
gtgcttatcaagaaaactgacactggatttggattcaatgtcagaggacaagtcagtgaa
ggaggtcaactaaaaagcatcaatggagtcctctacgctcccctgcaacatgtcagtgca
atattagaagatggagcggcagagacggcaggagttcgtccaggagacagaatactagaa
gtgaatgaggaaaatgtggaaggtgcaactcatcgacaagttgttgatctaataaaagca
ggaggagatgaattaaagttgactgtgatatctgttccggctaaagatgctcacagactc
gatccagaagatgaattcttctacgactacactgatgttatcacgatcagacttgatctt
ccgagcttcgagcatgtggaggagaacggaatgaaatacgtggtctacgtaatcactctc
tcagagaaagtcgtagcgagacgtcgatacagtgagttcttgtcattatacaccgaatta
gaaaagattttcactgatttccaatttcctaagtttcctgggaaatggccgttccaaatg
tcagatcaacagttggaaaaacgaagaatttctctgcagaatttcatcaaaaatactttc
aacatcagagtgatcatggaatgtgatttagtccaagatttcctgaatcttaattcaata
aatttggattatgaggccgagaagtcgaagaaatcttcgaaatcagctgacgaaccagaa
ttacatgaatataacgctgatgaagaactcggatcaacgaaagtttcacctcaaaaagcg
gaagtggacacaaggcaactgaatggtggagccaaatcaaaatccaattctacggaagaa
caaaaaccctcagaaaaagtcactgaaaccaaaaaaccagccaaaccatccattccaacg
ttaaaaccgaaccaaatatctatctcattgtttgataatagtgacatcataatgactatt
gaaagacagacaacagctaatgatgtacttgaacatgtctttgacaagttgggaatacca
gaaaacaaaaaaatatttttcggccttttttgtccgacaagagaaaatttttttgtgaag
ctgaggaccgatgaccttatagtgccaaagttgaaaggtcgtaagaagcgggaagtaaaa
atcaggaagtggttattttcacgaaatcaagaaagtgatgttttatctggagattcaaaa
atttcagaatatgtttatcagcaagcaattgaagatgtcaagcaaggccacataaaaaca
acaggacgaaccctcgctcagttgaagatgttggcgtcacagaacaaaactagtgattac
atggagatggtgtcacaggcgaatgattataaccatgtgacgtttccgcactgtccgtgt
gactctcgaaagaaaggtcacgttatcgtcgtggcttcgtacgagactttcaaattgtac
gcctgctctgaagaaggagaacttgagaatcaagtaatccagttttcgtgggatgagatg
aaagagtgggagaccgaggaggaggaggagagtgagaatcgagcattctgtttccaatat
caacgcggagagaaaaaaccaagatgggtcaaagtgttttcagaatattgtgaatacatg
aaagattgttttgagagaattttagaagaaagaaaatggagcaaagaggctgagcaagag
ggtgatgtatcagagggaaatacattttcgaagcaacaagtttcctccgcagaagcagaa
gataattctgatgatgacgatggaggactgtaa
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