Styela clava (leathery sea squirt): 120333851
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Entry
120333851 CDS
T07291
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120333851
04812 Cytoskeleton proteins [BR:
sclv04812
]
120333851
Cilium and associated proteins [BR:
sclv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120333851
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120333851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
DCX
DUF7755
FGF
WKF
Motif
Other DBs
NCBI-GeneID:
120333851
NCBI-ProteinID:
XP_039257172
LinkDB
All DBs
Position
Unknown
AA seq
3014 aa
AA seq
DB search
MSGTTSLPIMPRHPGPPSLSANHRDTFSISHRSVGPHSTISGPPHIGGTSASTPTSRLSI
KDSSQIMAKNVLFYRSGDTNFQSFKVAVTKRNFRTFDSLLENLSEKVSLPFGVRTISTPN
GTHGISRLDELEDGKAYICSDRKTVKPLNLNLKRKNRPPWFISKPKTRTRRVPTLARRSS
QTSPETSLPPRYQQVKTPKKVVIVKNGDPSFRHIILLSRRTHQNFDQILEDVADIFRIKQ
HHLYSCEGRKIESLQELFANGNVFVLAGKESFIPMEYRMKRGANAQSKSGSSAENTNAVD
SARMPKELKRTKGRWRVTVTTSELPAAGTDSRVLLTVYGAKGNSGAIPLNHNNVTGTSTI
VNRDKSKKLFMSGNEDEFVVNVGFISDIRKIRISHDNSGKSSPGWLCEEVILSDLTTGEV
MTFPFNRWLSRDEDDGEICRELPATAQNEHSPPVLRYIVSVHTGDLWNAGTEANVYITLY
GTLGDSGSRLLQVNGKPKQLHKGSNDVFRFEAVDLGTLQRLVVGHDGAGPGAGWYLERII
VREDRVGSDEYIFHCDRWLDESQDDRKIVREIFVETKASHSRLRNHNEKSRELELWDQEK
WKFQKGNQIMLISKATGRSIRTKPDGSVDGLGVVSHPFDLVKIKESDLGVYEVIKRRGTI
RSFCSASTPAYHLAIDQNRLLGQGKGGTFCEFVIKVQPDRSVMLESCRYPGHYISIDPSG
KPADTRGHPNTTGRLFNVYVKGCFRNNSIIIFNTSPTQALVVTGVGDVVGTGKRGDITSD
MKTAAKSPNVSVPPQWANFRVIKVAEGVRMFQCEKNPRRYLRIKDGQCDGLGSGDVYCHF
KVQKYKQGAYVTLQSMKHRGVFVGLSSNGKARPTVDTGDSNTQFFPEVIKFGEKKKLDAH
QYRTPEPSFVTEEQFVNNKGKTPAISEISPISRNQQQKQMAIIRSREFGSPGPNEGDYRI
YVTTGNSGTKEVVTITAYGDKGRSGNITLGKGSDKGVFQCGQTDEFEANFSSIGRLYKIR
IGVEEASSNCDWRLKQVKMKDMTSNEIFRFKFNRWISRSKDDGDTLRERPVIIEGTDGEL
EMHRYHIQVRTAKNSSSFSSKKPPIIYLCLFGEKGDFGRRLLQKRSFVRNEVSKDTSRKP
FMPNQNDVFEIEAVSLGTLTKCALSCPTSLRNSSKLTSTSSYPAWLCDEIIVRESEGAST
EYVFTCKKWLGLKKAGSHATINLSLSEVRDVKQSSSDEADFKDGDWKLCVKTGTHPDAGT
SAKVIFYACGSDGSNSGDVILQSETDEIFEPGKTGKFKVALNEVNDLFKVRIGHDAKGTN
SAWFVENLKLSDPHNGISHTLLVNKWLAADKESYQVFTEVPIPRPGVEPLPVLKYQVMVY
TGSILGSDTDANVYITVHGANGDSGVRPLIKSKTNDIKFQESQMDVFDLDAVTLGELKKI
KIGHDGIGHGNGWFLHKVVIKESESSNKEYVFFCNRWLDDGQDDGKIEREIPVKLEEDIV
EDKVSDGEYRVLITTGVQSTMKSCPDDAKVTMVIYGDEGKTGEIAIQSLLSGRDSSMRRK
SRSKSQNGLRISGDITNCFRPGQTDECKIDIPEIGPIYKIRVSYNHLCSWSSWFLEKIVL
EDIASKKQLIFPCNRWLSTADDDQETVREIAVVSDGHETLKTILYNVTIYTGDRHGADTD
ANIYALIRGDRGDSGRRYFKSNSSDSASFQRGGIDMFTIEAVDLGRLVELVIGHDGEGYG
AGWYVEKVTVRAGEFAPSEWVFPCNAWLDDHIGDLKISRRLFPVGVMVLDSHEEELEGLG
TLSSREGGHDGLWEVNVSVSEVATEDINRIHLTGVFYGTNGLRKSDIISLGEWSTGGRKK
MKTQINLKEIGEIFKIRVGIPDYNTSANLFLENISLQNTRTKEQIQFAFHTQLHSESGST
TKELPVIKPQKPLSKVTRYLIDVVMSPASTNLVPTGKLQMNLFGESGDSGYRTFISGTQS
FHATEQKDGYLFKLDSVDLGRLSSVGVMYESEEQDKSDGWTLQTISISIEDHPSSSAVAS
INSMIYKSEVDHIFKTTTSEERIEKIFELSEDLLDKSSPYSIKPSSNQLDMSGPKQAQRS
SEGVWNLTLYYSQDDKEAHEDSDEIIMIQNLEKNKVTVQVFGTRNSSENLHLSALNPQRK
KAIKQDMKIVETCLLLGSDMGTLYLVRLGCKQWDPNLNKIKLKDLHTKQEFLFNVSENQH
KKMENTKINGHIFHFDIPLVRPDVPPLEHHTYKLQLHTGNLPAANTDADVWVNLYGTHGD
TGLRKVSSGKWDSFKKGSQETVTIETVDVGEPRKISVNHNGSGLGAGWFLEDVSIQEERN
EKKSDFVFQCNKWLDEGVDEKVIQKDLYLTGVKFHYPSNFLRMSKGSWNCRLKAKDHVDD
ERDEPLIAKIAFYLKRQGDTTVTIYKTCKFETSEREFEVVFPDDEQEQTDDYISNSAEGI
RDDGFYKIRIEVNENGNETRDWPFEELLMADLDSREKLHFVFDEAPVWEGSNRNTVRELP
VMRVRKPPLKMYDYYIMFFTASDSIAHSNHNMKVDVMLSGENGDTGWRHLHKKSNGDTGA
MFQPGKMEMLFAEAVDLGEKVKSVSLRVGEKNVKWKLDRIKVKKGFFSKEEFTFEYGRWI
EPSSAPNNEIKLDLTSTILSAYPPLSRRSSPNDDVVETYDIHTILNIVSDVKEANKENSD
LKNHLPRLALKLYGTKNSSDLQFFEDNVSKAEDHYAANIEILPSSTLENLHKIGFGIESF
EGSRLDSLKNIQKISLLKLTIKNRKTNEYFSFSPGKTLFENAAITNGGKSTESGTNWLEL
VPARPKQNDSKIPSIVDFDITIKTGNQDEAGTTANVYIILHGEQKGNSTDSGKRWLLCHP
NEQRFAKGSESKFIIKGVDLGDLKQVTVGHDGNDAKLGWFLDSINVKPSNSAMTYVFLCR
KWLANLEDDTFIERTLELHDVRSPETIPKRPISTQGINSDHDDEPNTSSRIPTTDTLHGS
SKSGENSPRDGDAV
NT seq
9045 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggactacgtccctgccaattatgcctcggcatccgggaccgcccagtttgtcc
gctaaccaccgagacacattttccatatcacatcggtcagttggtccacattccacgata
agtggcccaccacacatcggtggcacttctgcttcgacaccaacttcaagattgagtatc
aaggacagctcacaaataatggcaaaaaatgttctcttctatcgaagtggagatacgaat
tttcagtctttcaaggtggcagtaacgaagaggaactttcgtacattcgattcacttctc
gagaatctttcagaaaaggtctctcttccgttcggcgttcgcacaatcagcacaccgaat
ggaactcacggaataagcagacttgatgaactggaggacggaaaagcatatatatgttct
gatagaaaaacagtcaaacctctaaatctgaatttgaagcgaaaaaacagaccaccctgg
ttcataagcaaacctaagactcgcacccgacgtgttccaactcttgcgaggaggtccagc
cagacaagcccagagacaagtttacctccaagatatcaacaagtaaaaacaccaaagaaa
gtcgtcattgtaaagaatggcgatccttcattcaggcatatcattctccttagtcgccga
actcatcaaaattttgaccaaattctagaagacgttgccgacatttttcgaataaaacaa
catcatttatattcatgcgaaggacgaaagatcgagagcctgcaagagctgttcgccaat
ggaaatgtattcgtacttgccggaaaggaatcgtttatcccaatggaataccggatgaaa
cgcggagccaatgcacaatcaaagtcaggcagctcggcagaaaacactaacgcggtggat
tcagcgaggatgcctaaagaattgaaacgtacaaagggaagatggcgcgtcaccgtaacg
acgagtgaacttccagctgctggtaccgattctcgagtcctacttacggtctatggagca
aaagggaactctggagcaatacccttgaatcataacaatgttactggaaccagtactatt
gtaaatagggacaaatcgaaaaagttgtttatgagtggaaatgaagatgaattcgtggtg
aacgtcgggttcatttctgatataagaaaaatcaggatcagtcatgataacagtggaaaa
tcatcaccgggatggctttgcgaagaagttattttgtccgatttaacaaccggggaagtc
atgacatttccttttaacaggtggttgtcacgcgacgaagatgatggtgaaatatgcaga
gaacttcctgcaacagctcagaatgaacattcgcctccagttctgcgatacatcgtctct
gttcatactggagatctctggaatgctggtacagaagcaaatgtctacattactctatat
ggaacattaggtgactcaggatcaagactgcttcaagtcaatggcaaacccaagcaattg
cataaaggatcgaatgatgtttttcggttcgaagctgttgatctcggaacactgcaacgt
cttgtagttggacatgatggagctggtccgggtgctggctggtacctcgaaaggataata
gttagggaagacagagtcggatcagacgaatatatttttcactgtgatcgctggttggat
gaatcacaagatgacagaaagattgtcagagaaatatttgttgaaactaaagcatcacat
tctcgtcttcgtaatcataatgaaaaatcaagagaattggaactctgggatcaagagaaa
tggaaattccagaaaggaaatcagatcatgttaataagtaaagcaactggacgatctatt
cgaacaaaacctgatggatcagtagatggcctaggagttgtttcacatccatttgattta
gtcaagataaaagaatcagacctaggtgtttatgaagtgataaaacgtcgcggaacaatt
cgatcattttgtagtgcttcgacaccagcctatcatcttgccattgaccagaatagatta
ctgggacagggaaaaggtggtacattctgtgaatttgtcataaaagttcaacctgacaga
tctgtgatgcttgaatcttgccgatatcctggtcattatatcagtattgatccgagcggt
aaacctgctgacactagagggcatcccaacactactgggcgtttatttaatgtatacgtc
aagggatgtttccgaaacaattcaataatcatattcaacacaagtcccactcaagcttta
gtcgtgacgggggtgggtgatgtagtcggaactggaaagagaggggatataacaagtgat
atgaaaactgctgcgaaatctcccaatgtctcagttccaccacaatgggcaaattttcgt
gtcataaaggtggcggaaggcgtgagaatgtttcaatgcgagaagaatcccagaagatat
ttaagaataaaagatggccaatgtgatggattgggcagtggagatgtttactgccatttc
aaggttcaaaaatacaaacaaggagcctatgttactctgcagtcaatgaaacacaggggt
gtgttcgttggattaagttcaaatggcaaagcaagaccaactgtcgacacaggcgacagc
aacacacaattctttcctgaagtgattaaatttggagaaaagaaaaaattagacgctcac
caataccgaacacctgaaccttctttcgttaccgaagaacaatttgtgaataacaaaggg
aaaacacctgctattagtgagatatcacccatcagtagaaatcaacaacaaaaacaaatg
gcaattataaggagcagagaatttggaagcccagggccaaatgaaggtgattatagaatt
tatgttacaactggcaactctggaacaaaagaagttgttacgataactgcttatggagat
aaaggaagatctggaaatattactttaggtaaaggaagtgacaaaggtgtttttcaatgt
ggacaaacagacgaatttgaagcaaatttttcgtcaattggacgcttatataaaataaga
attggtgttgaagaagcttcttctaactgtgattggagactaaaacaggtcaaaatgaaa
gacatgacatcaaatgaaatatttcgatttaaattcaatcgctggatttctcgtagcaaa
gacgatggtgacacacttcgagaacgacctgtcataattgaaggaactgatggagaattg
gaaatgcatcgataccacattcaagtacgaaccgcaaagaattcttcttcattttcaagt
aaaaaacctccaattatatacttgtgcttgtttggtgaaaaaggtgatttcggaagaaga
ttgttacaaaagagaagctttgttaggaatgaggtttctaaagatacatcgagaaagccg
tttatgccaaaccaaaatgatgtttttgaaattgaagcagtttctctcggaaccttgact
aaatgtgcactctcatgtccaacatcactccgtaactcgtcaaaactaacgtcaacaagt
tcttatcctgcatggttatgtgatgaaattattgtcagagaatcagaaggagctagtaca
gaatatgtattcacttgtaaaaaatggcttggattgaagaaagctggttctcatgcaaca
ataaatttatctttgtctgaggttcgtgatgttaaacaatcatcatctgatgaagctgat
tttaaagatggagactggaaactttgtgttaaaacgggaactcatcctgatgccggaaca
tcggctaaagttattttttacgcttgcggatctgatggttcaaattctggggatgttatt
ttgcaaagtgaaacagatgagatatttgaacctggtaaaactggaaaatttaaggttgct
ctgaatgaggttaacgatcttttcaaagttcggattggtcatgatgcgaagggaacaaat
tcagcttggtttgttgaaaacctaaaactgtctgatcctcataatggtatttcacataca
ttattagtcaataaatggcttgctgctgacaaagaaagttaccaagtatttactgaagtg
cctattcccaggcctggagtggaacctttgccagttttgaaatatcaagttatggtatac
actggaagcatcttaggaagtgatacagatgctaatgtttatattactgttcatggtgct
aatggtgattctggagtaagaccattaattaagtcaaaaacaaatgatatcaagtttcag
gaatcgcagatggatgtctttgaccttgatgccgttactcttggagaattgaaaaaaatc
aagataggacatgatggtattggacatggaaatggatggtttttacataaagttgttatc
aaagaatcggagtcatcaaacaaagaatatgtcttcttttgtaatagatggcttgacgat
ggacaagatgacggcaaaattgaacgtgagatcccagtgaaactcgaagaagacatagtc
gaagataaagtatcagacggagaatatcgtgttctcattaccactggtgtacaatcaact
atgaagtcttgccccgatgatgcaaaagttaccatggtgatatacggagatgaagggaaa
actggggagattgccatccagtctcttctctctggtcgagattcgagcatgagacgaaaa
tctcgaagtaaaagtcaaaatggattgagaatatctggagatataaccaactgcttcaga
cctggacagaccgatgaatgcaaaattgatattcctgaaatcggcccaatatacaagatt
cgagtatcgtataaccacttgtgttcttggtcatcgtggtttttggaaaaaattgttctg
gaagatattgcaagcaaaaaacagctgatattcccttgcaacagatggctttccaccgct
gatgatgatcaagaaactgttcgagagattgctgttgtgagtgatggacatgagacattg
aaaaccatattatacaatgttactatctacactggagatcgccatggtgctgatactgat
gcaaatatttatgctctcatccgaggcgacaggggtgattctggtcgtcgatattttaaa
agcaattcatcagatagtgcttcatttcagcgaggtggaattgatatgttcacgattgaa
gctgttgatcttggtagacttgttgaattagttattgggcacgatggagaaggatatggt
gctggatggtatgttgaaaaggttacagttcgtgctggcgaatttgctccttctgaatgg
gtgtttccttgtaatgcttggcttgatgaccatatcggagatctcaaaatatcaagacgg
ctgtttccagttggcgtgatggttcttgattctcatgaagaggaacttgaggggcttgga
actctttcaagtcgagaaggtggacatgatggtttatgggaagtgaatgtttctgtgagt
gaggtggctacagaggatatcaatcgcatccatcttactggagttttttatggaacgaat
ggacttcgaaaatcagatattatatcattaggagaatggagtactggaggaagaaagaag
atgaaaactcagattaacttgaaagaaattggagaaatatttaagattagagttggaata
ccagactacaatacctcagccaatctgtttcttgagaatatttctcttcaaaacactcga
acaaaagaacaaatacagtttgcatttcatacacaacttcattcagagagtggatctact
acgaaggaacttccagtgataaaaccacagaaacctctgtccaaggtcacccgctacctc
attgatgttgtaatgtcaccagcatcaaccaatctcgttccaactggaaaattgcaaatg
aatttatttggagaatctggggattcaggttacaggacatttatctcagggactcaaagt
ttccatgcaaccgaacaaaaggatggatatctgttcaaacttgattctgtagatcttggt
agactttcgtctgttggagtcatgtacgaatcagaggaacaagataaaagtgatggttgg
actcttcagactatttccatcagcattgaagatcatccaagttctagtgctgttgcttcc
attaactcaatgatatataaatctgaagttgatcacatattcaaaacaacaacatcagaa
gagcgcattgaaaaaatatttgagctttctgaagatctgttggataaatcaagcccttat
tcaataaagccgtcatcaaatcaattggacatgtctggaccaaaacaagcacaaaggagt
tcggagggagtgtggaatcttacactttattattcacaggatgacaaagaagcacatgaa
gattcagatgaaattattatgattcagaacttagaaaaaaataaagttacggtacaagta
tttggaaccagaaattcatcagaaaatctacatttatctgctttgaatccacaaagaaag
aaagcaataaaacaagatatgaaaattgtagaaacttgtcttctgcttggatcggatatg
ggaacactgtatttagtgcggcttggttgcaaacaatgggatcctaatttgaacaagatt
aaacttaaagatcttcataccaagcaagaatttttgttcaatgtgtctgaaaatcaacac
aagaaaatggagaatacgaaaattaatgggcatattttccattttgacattccacttgta
agaccagatgttcctccacttgaacatcacacttataaactccagcttcacactggcaac
ctaccagctgcaaacactgatgcagatgtatgggtgaatttatatggtactcatggtgat
actggtctcagaaaagtaagctctggtaaatgggactctttcaaaaagggaagtcaagaa
actgtaactatagaaacggttgatgttggtgaaccacgaaaaatttctgtcaaccataat
ggcagtggactaggtgctggatggttcttggaagatgtctcaatacaagaggaaagaaat
gaaaagaaatctgactttgtattccaatgcaacaaatggttggatgaaggcgtggatgaa
aaagtgattcaaaaagatttatatcttactggagttaaatttcactacccaagtaatttc
ttgagaatgtcaaaaggatcatggaattgtagattaaaggcaaaggatcatgttgatgat
gaaagggacgaacctctcattgctaaaatagcattctatctgaaacgccaaggagataca
actgtgacaatctacaaaacttgtaaatttgaaaccagtgaaagagaattcgaagttgtc
ttcccagatgatgagcaggaacaaactgatgactatatcagtaattctgccgagggaatc
agagatgatggattttataaaatacgaatagaagtcaatgaaaatgggaatgagacaaga
gactggccttttgaagagttgttaatggcagatcttgactccagagaaaaacttcatttc
gtttttgacgaagctccagtttgggaaggcagtaatcgaaatactgtacgtgaattacca
gtcatgcgagtcagaaaacctcctcttaaaatgtatgactactacatcatgttcttcact
gcgagtgattctattgcacattctaaccacaacatgaaagttgacgtaatgttatctgga
gaaaatggtgacacaggatggcgacatctgcacaaaaaatcgaatggtgacacaggtgcc
atgttccaaccaggtaaaatggaaatgctttttgctgaagctgttgatttaggtgaaaaa
gtgaaaagcgtgtcccttcgtgttggagagaaaaatgtcaaatggaaacttgacagaatc
aaagtaaagaaaggatttttctcgaaagaggaattcacttttgaatatggaaggtggatt
gaaccctcgtcagcaccaaacaatgaaatcaaactggatttgacaagcacaattttatca
gcttacccgcctttaagtcgtcgaagctcacctaatgatgatgttgtggaaacttatgac
attcataccattttgaacattgtcagtgatgttaaagaagcaaacaaagagaattccgat
ttgaaaaatcacttgccacgacttgctcttaagttgtatggcactaaaaattctagcgat
cttcaattttttgaagataatgtatcaaaagcagaagaccattacgcagctaatattgag
atcttgccgtcttctactcttgaaaatttacacaaaataggatttggaattgaaagtttt
gaaggtagtcgattggattcattgaagaacattcaaaaaatatctctactcaaattaaca
atcaaaaacaggaaaaccaacgaatatttcagtttctctcctggcaaaacattatttgaa
aatgctgctatcaccaatgggggaaaatcaacagaatctggtacaaactggttagaactg
gttccagcccgtccaaagcaaaatgattctaagattccatccattgttgactttgacatc
acaatcaaaacagggaatcaggatgaggcagggacaactgccaatgtttacataatactt
cacggcgaacagaaaggcaattcaacagatagcgggaaacgttggttactgtgtcatcca
aatgaacaacgatttgccaaaggttcagaatctaagttcattatcaaaggtgtggacttg
ggtgacctgaaacaggttacggttggacatgatggcaatgatgcgaagctaggatggttt
ttggacagtatcaatgtgaagccgtcaaactctgcaatgacttatgtgtttttgtgtaga
aagtggcttgcaaatctggaagatgatactttcattgaacgaacattagagttacatgat
gtacgatcaccagagaccattccaaagcggccaatatcaactcaaggaattaattccgat
catgatgatgaaccaaacactagctctagaatcccaacaacagacacactccatggatca
tcaaaaagcggagaaaatagtccaagagatggtgacgctgtatga
DBGET
integrated database retrieval system
