Styela clava (leathery sea squirt): 120334160
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Entry
120334160 CDS
T07291
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120334160
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120334160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
TPR_GEMI5
BRR2_plug
DUF7044
Motif
Other DBs
NCBI-GeneID:
120334160
NCBI-ProteinID:
XP_039257546
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MKNLVLLTCINATIPKLHEADVYIAIDSDTGRVYINTTTDIIGVDPTIDEETFAIGLEEL
GDACVNVTGLQYLQGEDSICVSTDHGDLVVVNVLTKLVESVGTVDSGLLQMKWSPDQELL
LLGTGHNSIIVMTREFDPVAELDINASEFGEGQFITVGWGKKETQFHGSEGKGAAVKKNE
SIEPALLWDDRKIRIVWRGDGQYFAVGMIDPVNGNRKFRVWNRECVLQYTSEYIGGLESA
LAWRPSGNLLVSSQRKPHRHDIVFFEKNGLQHGEFTLPFGKDEMEVKYLEWNSDSSILMI
WLRNLNYTKKDVDKSKTEDTSDCLQFWTMSNYHWYLKQSVELKNHETPSCVQWDAEQSHR
LHIVCKNGKYWQYVFGKTVNDSNIPVLCDEKEVVVNGHHDKGVKNEETFVAVVDGKSILM
TPFQHMCVPPPMSAYKLMLPDSANSVAFSPLKDNSSDISVFMKNGEVAMFTMENIGSDAE
SLQDRLSVKLDAAGGNGFIHCIKTHVPKSLLKIETEIDDAIDTSALHHWIWLNESKMFAV
SPGILPGIDLAVLFQIDFESNSLKAIKSTEVHGLVLSAILFNSSCVLIQLQDGTILKCDI
PSLEVSDYTSPSGQLLKFPRPCPQVTSCSFDGDPCIVGLSEHFRMYINDTEIASDCSSFS
LHNDFLFMTTHSHKLRCISRKISLENVLKYYTTQLEGRSLIPNCEGIETERAVERGSKII
TVTPSDSRLILQMPRGNLELIHPRNLVLSLVKSLITSLKYGEAFTVMKKHRINMNLLYDI
DKKMFEENIETFVKALDSTTNLNIFISDLQNEDLTQTMYKQYFLTKTSKDNNYAKSSNSS
VNVKINNVCDILVLVLEKSEKRFISSLVTADVKKKPSEVGKALKRIKILADDIGHEEKLI
SSVLKYMTVLVDSNTLFNEALGTYDFKLVLMVAEKSQLDPKEFLPMLHELQSLEENYRKF
KIDLKLRRYSTALEHISKCSGHFDECLDLIQSHEMYKEALNLYDRGTGSYNTICEMYGEC
LSGKRKYEEAGIIFTHCQDSRKALESFSNSNNYSLALMTAFKLKLDRNEIVELAYKLAEK
AKTTSRHLEAVEILEHHAHDIEQAVETALHAQLWQIALRMTQQHSRTDLNETHVLPSIKE
AHENTFQILESHEKLIEQQTARLQTVRQLKEKQRMQALLDGVEGIGMDSDLYSDTSSTMA
GSVTSRPSSTTSRSTGRSSKSRRKKERRGYSLKEGSRFEDLALLHSLKVAINAVDELSGD
VKNLCIHLALLHMDSLAETLQKQYSEVRNIIGRLLPTIWSQDLIQNDQTMTTGPQSTVNS
IVASMQNRRSDRNDNNEEKRDFKDLDLFVTPKFDSKSQSWMTGFQDKL
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctggtattgcttacttgtataaatgctacgattccaaaacttcatgaagct
gatgtatacattgcaatagatagtgatacaggaagggtttatatcaatacaacgaccgat
attattggcgtggatcccactattgatgaggaaacatttgcgataggtctggaagaactt
ggtgatgcatgtgttaacgttactggtcttcagtatctccaaggggaagacagtatttgt
gtttctactgatcatggagatttagtagttgtcaatgtgttgacaaaattggtcgaatca
gtgggaacagtagacagcggtttgttgcaaatgaaatggagtccagaccaagaattgctg
ttgttaggcacagggcataactcaattattgttatgactcgcgaatttgatcctgttgct
gaacttgacatcaatgcgagtgaatttggtgaaggtcaatttattactgttggctgggga
aagaaagaaactcaatttcatggaagtgaaggaaaaggggcggctgttaagaaaaatgag
tcaattgaacctgcattgctgtgggatgacaggaaaatcagaattgtatggagaggggat
ggacaatattttgctgttggaatgattgatcccgttaatggaaacagaaaatttcgagtt
tggaatcgagaatgtgttttgcaatatacgagcgaatatatcggtggtttagaatcagca
ttggcttggaggccaagtggaaatctgctagtttcaagtcaaaggaaaccgcatcgacat
gatattgtattttttgaaaaaaatggtttgcaacatggtgaattcaccctgccctttggt
aaagatgaaatggaggtgaagtatttggagtggaacagtgattcttcaattttaatgatc
tggttgagaaatctgaattacactaaaaaagatgttgataagtcaaagacagaagatacc
tccgactgtttgcagttttggaccatgtccaactaccattggtatctcaaacaaagtgtg
gaattaaaaaaccatgagacgccatcgtgtgtacaatgggatgctgagcaatcacataga
ttacacatagtgtgtaaaaatggaaaatattggcaatacgtatttggaaaaactgttaat
gattcaaatataccagtcctctgtgacgaaaaagaagtcgtcgttaatggacaccatgac
aaaggagtgaaaaatgaagagacatttgtagctgttgttgatggaaaatccattttgatg
acaccgtttcagcatatgtgtgttcctccgcctatgtctgcatataaattgatgttacca
gattcagcaaattccgtcgctttcagtccgttgaaagataactctagcgatatttcagtt
ttcatgaaaaatggtgaagtagcaatgtttacaatggagaacattggaagtgatgcagaa
agtctccaagacaggttatccgtgaagttggatgctgctggaggaaatggatttattcat
tgtatcaaaactcatgtgcctaaatccttgttgaaaatcgaaactgaaattgatgacgct
atcgatacatctgctctgcaccattggatatggttgaatgaatcaaagatgtttgctgtg
tcacctggtatactacctggtatagatcttgcggttttgtttcagattgattttgagtcc
aattcactgaaagcaataaaaagtacagaggttcatggtctagttctttctgccatttta
ttcaattcttcctgtgttctcatccagttgcaagatggaacaatattgaaatgtgatatc
ccttcacttgaagtatctgactacacttcaccatcaggacaactgttaaaattccctcgg
ccgtgtccacaagttacaagttgttctttcgatggagatccttgtattgttggactttca
gagcattttagaatgtatatcaatgatactgaaattgcatctgattgttcttcattttct
cttcacaacgattttttattcatgacaacacattcacataagctacgttgcatcagtaga
aagatttcactcgaaaatgttttaaaatattacaccactcagctagaaggtcgatcgtta
attcccaactgtgaaggaatagagacggaaagagcagtagaacgcggatcaaaaattata
actgtaactccgtcagacagtcgacttattctgcaaatgcccagaggaaatttggaactc
attcatcccagaaatttagtgctgtcattggttaaaagtttaataacatcgttaaaatat
ggagaagcatttacagtcatgaaaaaacatagaatcaatatgaacctgctttatgatatt
gataaaaagatgtttgaagaaaatattgaaacatttgtgaaagcattagattcaacaaca
aacttaaatatattcatcagtgatttacaaaatgaagatttaacacaaacaatgtacaaa
cagtattttttaacaaaaacttcaaaggacaataattatgcgaaatcttcaaattcatct
gtaaatgtgaaaatcaataatgtttgtgatatcctcgtcttggtattggaaaaatcggag
aaaaggtttatttcttcacttgtaacagctgatgtgaagaagaagccttcggaagttgga
aaagctcttaaaagaataaaaattcttgccgacgatattggtcatgaggaaaaactcatc
agtagtgttctaaaatacatgacagtattagttgatagtaatacactgttcaatgaagct
cttggaacatacgattttaaactagtactcatggtggccgaaaaatctcaacttgatcct
aaggaatttctacctatgttgcacgaacttcaaagtttggaagaaaattacagaaaattt
aaaattgatttgaaactaagaaggtattcaactgctctcgaacacatttcaaaatgtagc
ggccattttgatgaatgtttagacttgattcagtctcatgaaatgtataaagaagctttg
aatttgtatgatagaggcacaggaagttacaacacaatttgtgaaatgtacggagaatgt
ttatcaggaaaacgtaaatatgaagaggctgggattattttcactcattgccaggattca
cggaaagctcttgaatcattttcaaattcgaataattattctcttgcattgatgacagcg
tttaaactaaagcttgacagaaatgaaattgttgagcttgcttataaactagcagagaaa
gccaagacaacgagtcgtcatttagaagctgtggaaattttggagcatcatgctcatgat
attgagcaagctgttgaaactgcacttcatgcacaattgtggcagattgctttacgaatg
actcaacaacacagtagaacggacttaaatgaaacacatgttttgccatcaataaaagaa
gcgcatgagaacacatttcaaatcttggaatctcacgaaaaattgattgaacaacagact
gcacgtttgcaaaccgttcgacaactgaaagaaaagcaaagaatgcaggctttattggat
ggggtcgaaggtataggaatggactctgacttatattctgacacgagcagcacaatggca
ggatcagtcaccagtcgtccctctagcacaacaagcagaagtaccgggcggtcctcaaaa
agtagaagaaagaaagagcgacggggatactctctcaaggaagggagtaggtttgaggat
cttgctctgctccattcactcaaagttgcaataaatgctgttgatgaactttcaggtgac
gttaaaaacctatgtattcatcttgctttgctgcacatggacagtttagcagaaactctc
cagaaacaatattccgaagttagaaatatcataggtcgactcttaccaacaatatggtca
caagacctgattcaaaatgaccagacaatgacaactggtccgcaatcaacagtaaatagc
atagttgcatcaatgcaaaaccgaaggtctgatagaaatgataataacgaagaaaaacgt
gattttaaagatctggatttatttgtcacgccaaaatttgacagcaaaagtcagtcatgg
atgaccggctttcaagataaactataa
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