Styela clava (leathery sea squirt): 120334181
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Entry
120334181 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120334181
KO
K09313
homeobox protein cut-like
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120334181
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
120334181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
120334181
NCBI-ProteinID:
XP_039257568
LinkDB
All DBs
Position
Unknown
AA seq
2103 aa
AA seq
DB search
MSSNISSMLQFWKNFNLIQLQRDLDVNATELANRQDASDASRRRLVEQSKEFKRETPEDI
RKLVSPLLRSFQGEIDALSKRSKACEADFLNLYKRLIELPDPVLALEQAESYQRKAQRLN
DVETENQKLRETLAEYNKEFAEVKNQEVTIKTLRERVRDFEKGTETRAKQLTLEKNEELQ
KQFEEKEKKLQETQLLIATKLGEAEQMASTFKAALDASQAELFDLKSKYDEETAAKQAEL
DLVLGDLDRSSQRNAIAEKEIENLREQLLDGGNRSHEHEKPSTTAMEEAFEVLSRSSLES
ELANKEKEISQLVEDVQHLQGSMGKLRDTSASAIAKLEEELSNKNSIVQELQRQLEERED
YNEIKRELQIIKSTEFSTLDSTPSGDQFHSSSSKSKSLEMLLLEKNRAQQSENTALRAAN
AQLTGSHRGSNAVPITPPHSSPERVRRGRERSTSSRYRNFSTNSHPSQTINSFSPSQEYS
QLFEPTDALSQLQLQNQQLNALLNLKILANIKAAVAAQNINTSPLSALGGCLNMANQSRS
SFRTPGRETFSPHNRPGTSRSNNTIPKNFESHLLAKYLSQLQKLGVSSSTSLPGLSPKLS
SNSRTNYHNSQEFSDSSDNENYDEAFSQNSTHHRAWGGSNNINSRHVSDPSTLRTSAVTS
HNDSDTSFLSQIRRHSLGGDQIAHLEEVDTEELTCQVRELLQANNIGQRAFGQYVLGLSQ
GSVSEILSKPKPWSKLTYKGKEPFFKMLDFVSSSSNVDALKSLQRKDREDRVLCGGRTQS
SLRQADPDSEQAIANILAAAREEMRVEQEKIKRSQDFYTYQRESETTNIRNSLSNPDRDT
SPDKSFSKVSSSTGTMTTVAAAGRCSYSDNAVSRFTEKVKTVATSVAVEQTLETGMPSLI
KRQRCTTGNESGRVLQKTHKDKHIRSESQSEQNESFVTTASGNSHSSHNRSKVTSSSSYI
DKESVDHSGNKEDHLVKSEPRDSGEVSDYFGQDKVSKSGFTATKEELLSANQRLISSQPD
SDSLQRLFVTTTYNDPFIPPPLSPTAEESRNSRGSGAGTPTSDNEDRQHCYSSPFMGAES
HYMNDNGKRSPTTKSDTELEKIQPLRKRVNSLSPPSRHSSNLLHDPPVLFRELSCPAFDE
SDRDATTVSSTTPTTFSNMLSSNMSSLQTSSSLFDSHASYTELSPVTTGTLYNPHRDDHT
QHGFSQVSQSSFTTVEGAPNGISSMLPPLTLKSHPHHGSSPIPTYSALTNTISSSKYANY
PQEQHHTQAEADYNDDQQFIETSDLMPPIPPEALHRLSMSQVDTVSVTKQVRDRLAKHAI
CQRIFGEKILGLSQGTVSDILSHPKPWGKLTHKGREPFARMIMWLTDATAGGLLPTHAGS
QLTSDPSAAENTARSPTDSSNGDPINLTRDQAKLSREPSPSSNGTLDSNAQYVTMSPPSA
TPPDSAHTSLDRTSPHDLHPHTTPVSSSSSPPEEAFNQLERHFRTSAPVAMEQSNNGSPI
TPLQQMLNIQELAASCPKLDTFALTRKVKDLLTEHNIGQRIFGQAVLGLTQGSVSDLLSR
PKLWRSLSLKGREPFVRMQLWLSDPNNIEQLKNLKLERWMEKKWGGKRQRSNDNQMQHNL
SPVKKQRIVLSTEEKEVLRRTYGIEPYPSQETVDLLAGKLGRKSSTIVNWFHNYRSRVKR
GFFPGDEIQDGSGKKSGLGKMTVKQLLDSITLSKQPCTNVNQGRGNSFESQRNFASKNSH
RVTTHHGSTRRQNSNMSDHQMQQQTWVPTSHIPSPTGFDRYVTMDQMKTETMDQHFQGLH
RVTPSDIYSNQSMHIKEETKMMELQSENDAMFSSAYSYPTSNTVSDIFKSAEMALSDPVS
LAAASSFIQPKPMHHHQHHQHTHFPGDGNMYTNLDEPHQDNYAVSITNDSYSNKVPVSPP
SDHGNSILPPVHTLTPKKSFGSPTLSSSSLVLPSASSLLNQPQLPSLTPDLRMDPHMSYG
NSRPHLPRLVDLSRPQYDAIIANNNMNNNSRSNLAKHVSLPGGVSLSVTSTNGSPTQGVS
CNDTITATVWVSSPSESSGSKEENTIISKPNVVTSESNQPRFTMADTMANDKENTDDSYA
WVF
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaatatttcatctatgctgcagttttggaaaaattttaatctcatccaactt
cagagagatttggatgtgaatgcaacagaacttgccaacagacaagatgcaagtgatgca
tcaagacgacgactagtagaacaaagcaaagagtttaaaagagaaacacctgaggatata
cgcaagttggtttctcctttactgaggagcttccagggggagatcgatgctttatcaaaa
cgcagtaaagcttgtgaagccgattttctcaatttatacaagaggttgatagaattacca
gacccggttttagctcttgaacaagcggagtcataccaacgtaaagcacaaagactaaat
gatgtggaaaccgaaaatcagaaactgagagaaactctagcggaatataacaaagaattc
gctgaagtcaaaaatcaagaggttacgataaaaactcttcgcgagagagtgagggatttt
gagaaaggaactgagacacgtgcgaaacaactcactctagagaaaaatgaagaattgcag
aaacaatttgaagaaaaagaaaaaaaactacaagagactcagctgctgatagccacgaaa
ctgggtgaagcagagcaaatggcatctacgttcaaagcagctcttgatgcttctcaagca
gaattatttgatctcaagtcaaagtatgatgaagaaactgcagcgaaacaagcagagttg
gaccttgtgcttggagatttggacagatcatctcaaagaaatgcaatcgctgaaaaagaa
attgaaaatttaagagaacaattgctagacggtggcaatagatcccacgagcatgagaaa
ccttcaacaaccgcaatggaggaagcttttgaagttctttcaaggtcaagtttggagtct
gaacttgccaacaaagaaaaagagataagtcagttagtggaagatgtccaacatcttcaa
ggatcaatgggaaaattgcgagacacatctgcttctgctattgccaagttggaagaagaa
ttaagcaataagaattccattgtacaggagctccagaggcaacttgaagaaagagaagac
tacaacgaaatcaagcgtgaattacaaatcataaaatcaactgaattctctactctggat
tctacaccgagcggcgatcaatttcattcgagttcgtcaaaatctaaaagtcttgaaatg
ttactgcttgaaaagaacagagcgcaacagtctgaaaatactgctttgcgtgccgctaac
gctcaactgactggtagtcaccgaggaagcaacgccgtaccgatcactccaccgcattcg
tcaccggaaagagttcgacgcggaagagaaagaagcacatcatcacgctatagaaatttt
tctacaaattctcatccctcgcaaacaataaattcctttagcccgtctcaagaatattca
caactttttgaaccaactgatgccttgtcacagttgcagttacaaaaccaacaactaaac
gctttattgaatttgaaaattttagcgaatattaaagctgctgtcgcggctcaaaatatc
aacacttctccactttccgctctcggaggttgcttaaacatggcaaatcaatctagaagt
tcatttcgaaccccgggtcgggaaacattcagcccccacaataggcctggaacgagtcgt
agcaacaatacgattccaaaaaacttcgaatcgcatttacttgccaagtatttgtcgcag
ttacagaagcttggtgtttcaagttctacaagtttgcctggattgtcacctaagttatct
agcaattccagaacgaattaccacaatagccaagaattttccgatagttcagacaatgaa
aattatgacgaagcattttcgcagaattcaacccatcatcgtgcatggggtggcagtaat
aatattaactctcgacatgtgagtgacccaagtacattgcgcacttcggctgttacttct
cataacgactcagacacatcttttctatcacaaattcgaaggcatagccttggaggagat
caaatagcacatcttgaagaagtagacactgaagaactaacttgccaggttagagaattg
cttcaagctaataatatcggacagagggcttttggccaatacgttttaggattgagccaa
ggatccgtcagtgagatattatccaagccaaaaccatggtcaaagttgacttacaagggc
aaggagccctttttcaaaatgttggattttgtctcatccagcagtaacgttgatgcatta
aaatcattgcagaggaaagaccgagaagatagagtattatgcggtggtagaacacagtcg
tctttgaggcaagccgatccagattcggaacaggctattgccaacatattggccgctgct
cgtgaggaaatgagagttgagcaggaaaaaatcaaacgatctcaagacttttatacttat
caacgagaaagtgagacaaccaatatcagaaactctctttcaaatcctgatcgtgatacg
tcaccagacaaaagtttctcgaaagtttcaagttcaacaggaactatgacgaccgttgcc
gcagctggtcgttgttcttattcagacaatgctgtttcaagatttactgaaaaagtgaaa
actgttgccacaagtgtcgctgtagagcaaacgcttgaaacaggcatgccatcattaatc
aaaagacaacgctgtacaacaggaaatgaaagcggcagggtgctacagaagacgcacaaa
gataagcacattcgttctgagtctcagtcagaacagaatgaatcttttgtgacaacagct
agtggcaatagtcattccagccacaacaggtcaaaggttacgtcaagttcaagttatatt
gataaggaaagtgttgatcatagtggaaacaaagaagatcatttagtgaaatctgagcct
cgagatagcggagaagtttcagattactttggtcaagacaaagtatcgaaaagtggcttt
acagctacaaaagaagaattattatctgctaatcagcgtttaattagttctcaacctgat
tctgatagcctacaacgtctttttgtgacgacaacatacaacgacccatttattccgcca
cctttgtctcccactgcggaagagtctcgtaattcaagaggaagtggggctggaacccca
actagtgataacgaggataggcaacactgttacagttccccctttatgggtgctgagtct
cattacatgaacgataacgggaaaagatctccgactacaaaatctgacacagaattggaa
aaaattcagccgctgagaaagagagttaattcactctcgccaccatcgaggcattcttca
aacttactccacgacccaccagtactttttcgggagttgtcttgtccagcattcgacgaa
agtgaccgcgacgctactactgtttccagtactactccgactacgttttctaacatgtta
tcatcaaatatgtcgtcacttcaaacatcttcttcactgtttgattctcatgcaagctac
actgaactaagtccggtgacaacaggaactttatataatccacatagagatgatcacact
cagcatggtttttctcaagtatctcaaagttctttcacaactgtggaaggcgcaccaaat
ggtatttccagcatgttgccgcccttgacattaaaatctcatcctcaccatggatcaagc
ccgatcccaacttattcagctttgacgaatacaatatcgagctcaaaatatgcaaactac
ccgcaagaacaacaccacacgcaagctgaagctgattacaacgatgatcaacagtttatt
gaaacgtcagatttgatgccgcctatcccacctgaagcattacacagattatcaatgtca
caggtcgacactgtttctgtgacgaaacaagtccgagatcgtttggcgaagcacgctata
tgtcagaggatatttggcgaaaaaatcttagggctctcacaaggtacagtcagtgatatt
ttatctcatccgaaaccatgggggaaactaacacacaaaggtagagaacctttcgctcga
atgataatgtggctcacagatgcaactgctgggggattgctgccgacacatgcaggttca
caactgactagtgatccatctgcagctgaaaatacggcgagaagtccgactgactctagc
aatggagatccaatcaatttaactagagatcaggcaaaactcagcagggaaccttcacct
agttcaaatggaacgttagattcaaatgctcaatatgtgacaatgtcgccaccatctgct
accccacccgattccgctcacacaagtttggatcgaacttcaccccacgatttgcacccc
catacaacccccgtttcaagcagttcctccccgcctgaagaagcattcaatcaactggag
aggcattttaggacctcagcccctgttgctatggaacaatcgaacaatggatcccctatt
accccgctacaacaaatgctcaatattcaagagttagcagcgagttgtccgaaactagac
acatttgcactcacaagaaaagtgaaggatcttctcacagaacataatatagggcaaaga
atatttgggcaggctgttttgggactgacacaaggctctgtcagtgatttgctgtctcgg
ccaaaactatggagatcactcagcctgaaaggtcgtgaacccttcgtccgaatgcaattg
tggctgtccgacccaaataatattgaacaacttaaaaatttgaaattggaaagatggatg
gaaaaaaaatggggcggcaagcgacaacgcagcaatgacaaccaaatgcaacataactta
tctcctgtgaaaaaacaacgaatcgtgttgtcaacagaagagaaagaagtgcttcgtcgg
acctacggtattgaaccgtatccatcccaagaaaccgtagatttactagctggaaaacta
ggtcgaaaatcaagcacaattgtcaattggtttcataattatagatccagagtaaaaaga
ggtttctttcctggtgacgaaattcaagatggttctggaaaaaagtcaggcctcggaaaa
atgacggttaaacaactattagacagcattactttatcaaaacagccatgcaccaatgtg
aatcaaggacgtggaaacagtttcgaatcgcagcggaattttgcatcgaaaaatagccac
cgtgtcacgacgcaccatggatcaacaagaagacaaaacagcaatatgtctgaccaccag
atgcagcaacagacatgggttccgacgtcccacataccgtcaccgacgggcttcgatcga
tacgtgaccatggaccagatgaagacagaaaccatggatcagcattttcaaggattacac
agggtgacacctagtgacatctactcaaatcaatccatgcatatcaaagaggagaccaaa
atgatggaattgcaatcggaaaacgacgctatgttcagttcagcgtattcatatccgaca
tccaacaccgtttcagatatctttaaatcagcagaaatggcactcagcgatccggtatca
ttagcggccgcttccagttttattcaacctaaaccaatgcatcaccatcaacatcaccaa
cacacacatttccccggcgacggaaatatgtacacaaacttagacgaaccacaccaagat
aactatgcagtatctattacaaacgattcctattctaataaagtccctgtgtcaccacct
agtgatcacggaaacagtatcctaccacccgtacataccctcaccccgaaaaaatctttt
gggtcccctaccttatccagctccagcttagttttaccgtctgcctcatctcttctcaat
cagcctcaacttccaagtttgacccctgacctcagaatggacccccatatgagttacgga
aattcacgaccccacttacccaggcttgtcgatttatctagacctcaatatgacgcaatc
attgcaaataataacatgaataataactctcgttcaaacttggccaagcatgtttcttta
ccgggcggagtgtcgctcagtgtgacatccacaaacgggtcaccgacgcaaggagttagt
tgtaatgacacgatcacagctacagtttgggtgtcgtctccgagtgaaagttcggggagt
aaagaagaaaatacaatcatctcgaaaccgaatgtagtcacatcagaaagcaatcaaccg
aggtttactatggctgatacgatggcaaatgacaaggaaaacacggatgacagttatgcc
tgggttttttga
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integrated database retrieval system
