Styela clava (leathery sea squirt): 120334189
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Entry
120334189 CDS
T07291
Name
(RefSeq) transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120334189
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Other basic domains
RF-X
120334189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
DUF5948
Motif
Other DBs
NCBI-GeneID:
120334189
NCBI-ProteinID:
XP_039257583
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MASDKNDDLLDLLVQNPDSLSREDLEKLCEAISKDTLTTEIGTTRSGDLVTPFHGYVPSR
ESCTQPVCASEVLAATNSLVDLNQKEDVEKHSTHNILQSLTTNTQQGIRSLNTGPISFRP
ITVSIPRQRPICSIPQVSSRDNCHTFQYASNHATSSAEMKRHPEKENRPQILAKRTASNG
IGGSNPQPIYVKHLEDDDEVKIATLRGVPDKNEENGAAVGMLVNHHGNMAIAYPIGPYHS
NVFEDNLYGYRRMQVRYTVPCSEQAVATTTWLMENFEENLMTTVPRSVMYQEYVRYFEKD
GRFRHFNQAVFGKMVRSCFPNLTTRRLGIRGHSRYHYAGLGVKSSSIYANHVFAKLETNV
VRTTTGHKKQNSRGQMNVAANVTVECCEEQGKSNKSTKNIEVEKPIPPKKNKKSGIPTVY
PGMRELKPILDIDHTRLNSFLNFYSRYNKQFLSYITALDHLKTKDHLQNFTVYLPYDCTD
LLQHPTIVDIIKIYDTILYKKATENLLPDCLASLSTDFKVAVRKFAKTFVQWVPDATAIC
DVPDEVHETRVGAATAWGDCVRRMTTLCHVAKEARKALRDHGLTKQLRVDLEMISIEEIA
LMCGWAGNDATMTENYNVDEHRDVITQEIAIAEKYLSVFIRMLKEHAAIEEYITVLDAIV
SEHGGAPNIDYNREDDTRKRRAAISQQFLMKWALYTSKMLSEITLRTSGSVGTFHLVSLL
FGDYVSHSLCTQNEEVVFMKVYKRIINEAMAQD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggataaaaatgatgatttgctggatttgttagttcaaaatccggattctctt
agtcgggaggatttagaaaaactatgtgaagcaattagtaaggatacgttaacaactgaa
atcggaactacaagatctggcgatcttgtcacaccgtttcatggctacgttccttcaagg
gaatcatgtacacagcccgtttgtgcgagcgaagtgctcgctgccacaaactcgctggta
gatttaaatcaaaaagaagatgtcgaaaaacactcgacccacaacatcttgcagagtttg
acaacaaatactcaacaagggattcgttcattaaacaccggtccaataagctttcgaccg
ataacagtaagcattccacgacagagaccgatttgttcaatccctcaagtctcttctaga
gacaattgccatactttccagtatgcttctaaccatgctacctcatctgcggaaatgaaa
cgtcatccggaaaaagaaaacagacctcaaattttagcaaaacgaacggccagtaatgga
atcggcgggagtaacccacaaccaatttacgtaaaacatcttgaagatgacgacgaagtc
aagatagcgactctgagaggagttccagacaaaaacgaagagaatggagctgctgtagga
atgctggttaatcatcacggaaatatggcaatcgcatatccaatcggaccttatcactca
aatgtatttgaagataacttgtatgggtatcgcagaatgcaagttaggtacacagttcca
tgtagcgaacaggcggttgcaactaccacatggctgatggaaaattttgaagaaaatttg
atgacgactgtaccgagaagcgtcatgtaccaggaatatgtacggtatttcgagaaagac
ggaagattcagacatttcaatcaagcagtattcggcaaaatggtcaggtcatgcttccca
aatttaactactcgacgtctgggtatccgtggacattcaaggtaccactacgctgggctg
ggtgtcaaatcaagctcaatatacgcgaatcatgtatttgctaaacttgaaacgaacgtt
gttagaacaacaacggggcataagaagcaaaacagtcgagggcagatgaatgttgcagct
aatgtaacagttgagtgttgcgaagagcagggaaagagtaataaatcaacgaaaaatata
gaagtcgaaaaaccaatcccgccaaaaaagaacaaaaaatcaggtattccgactgtatat
ccagggatgagagaattgaagccgattttggacatcgatcatacgcgtctcaactcattt
ttaaatttctatagcagatataataagcaattcctatcgtatattactgcactggatcac
ttgaaaactaaggatcacctgcagaacttcacggtatacttaccatatgactgtacggat
ttattgcaacacccaactattgtggatatcataaaaatctatgatacaatattatataaa
aaagcaactgaaaatctcctaccagattgcttggcttctctatctacagatttcaaagtc
gcagttcggaaatttgcaaaaacttttgtacagtgggtgccagatgcgacggccatttgc
gacgtgcctgacgaagttcatgagactagggtcggtgctgctacggcttggggtgattgt
gtcagacgaatgacgacattgtgtcacgtggcaaaagaagcgcgaaaagctttacgagat
catggactaacaaaacaattacgcgtggatttggagatgatatcaatcgaagaaatagct
ttaatgtgtggttgggctggaaatgatgccacgatgacagaaaattataacgtagacgaa
catcgtgacgtcattacacaagaaatagctatagcggaaaaatatttatctgtatttata
agaatgttgaaggagcacgctgccatcgaagaatacattactgtcttagatgcgatcgtc
agcgaacatggcggtgcaccaaatatagactataaccgtgaagatgataccagaaaaaga
agagcggctatttcacaacaatttttgatgaaatgggcactttatacaagtaaaatgctc
agcgaaattactttgcgaacgagcggatctgtcggaacatttcatcttgtatcgctcctg
tttggagactacgtcagtcactcactctgcactcagaacgaggaagttgttttcatgaaa
gtatacaagaggattataaacgaagccatggctcaagattaa
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