Styela clava (leathery sea squirt): 120334229
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Entry
120334229 CDS
T07291
Name
(RefSeq) cartilage intermediate layer protein 1-like isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120334229
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120334229
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
Ldl_recept_a
CILP_8th
Serglycin
Motif
Other DBs
NCBI-GeneID:
120334229
NCBI-ProteinID:
XP_039257631
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MTKKSTSTCYPYPTPTCYGKMPKEPASQTCPKWAIAVSIVAAAALVGAVIAIAVVFSRNN
DTCDGFQCTSGAMANGGSDCILSSSVCNNVEDCKNREDEKDCPISPCNSGQFWCIQGGSH
GNCISKDWACDGSDDCKGGTDEQNCTKAPACQRAQNFQTIAPNCERDVGNCSVSFCSNDV
NPKCCGPVYERSIASCSGGDIEFSRVLRCECQICESPKVFVAGSMEGCDSKVHNCSFGIE
INDTEVGRANTNGHFSFSVEYPSNYRITFSIIDDVDDLYFTQVKLINLISNQYAYSVTVK
MVLKPAAISFSSDTRKTVELGTTQDVAIEFAENSMFLPDGTEYSGEVKAAINFIDPSNRE
NSDNIPAQLLTEDVDGEGPGLLSSTGMLQTDIKTADGRQLNARGVQIELITDGLSQDETD
GVKLYRLGTEDGVWQEVSQMNTSSGTSLRRRKRSNHASVITRIDISSVRQIWNLDALVYP
YCHMKVRVFSDAQYLESSQVNGIVVISLYARSTNGAWANYLRRYAYNGVCVSVPCNGNWF
DIAQVYAEDNDYIVVEPKVPDDIQTTLKFENKLNYFTVQIPKNENVHGSNGPIYRYHYEC
YSAPFGDNHFRLSRVLPEDIEVNTIPIDENNIFSPWINDLFSWWPNRNLFKACYVKVKIL
PIDANEDDLKEWTVEAISRGGTHAVTKGKEYGRRISRGNGLTACVEYKCPDTLSDNEFDR
TEVTITPKLNGFNFAFVIPPNITINTSSFQDIVDEYQREIETLLGKPSLTAPALAAHIPE
LGIFYSEAIHPKLAKTEARRNCIQGSAVLTFSVSAAEISGSGSGSGSGSGD
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaatcaacatccacatgctatccatacccaactccaacgtgctacggaaag
atgccaaaagaaccagcgtcacagacatgtcctaaatgggcgatagctgtttcaattgtt
gccgccgcggcactagttggagctgttatagccattgcagtcgtgttttctcgcaataac
gatacttgtgatgggttccaatgtacttctggcgctatggcaaacggtggatctgattgc
atcttgtcatcaagtgtatgtaacaatgtggaagactgtaaaaatagagaagacgaaaaa
gactgtccgatatcaccttgtaatagcggtcagttctggtgcatacaaggtggttcacat
ggaaattgcatctccaaagattgggcatgtgatggttccgatgattgcaaaggagggacg
gatgaacaaaattgtacaaaagcccctgcttgccaacgtgcccagaactttcaaaccatt
gcaccaaattgtgagagagatgttggaaattgctcggttagtttttgtagcaacgacgtc
aaccctaaatgctgtggaccagtgtacgaaagaagcatcgcatcttgttcaggaggcgac
attgagttttcacgagtactgagatgtgaatgccagatttgcgaatcaccaaaagttttt
gttgccggaagcatggaagggtgtgattcgaaggtacacaactgttcatttggaattgaa
ataaacgacaccgaagttggaagagcaaacacaaatggacacttcagtttcagtgtggaa
tatccatcaaattatcgtatcactttttcaataattgacgacgtagacgatctgtatttt
acacaagtaaagctcattaatcttataagcaaccaatatgcttattcagtaactgtgaaa
atggttctaaaaccagctgctataagtttttcatcagatacaaggaaaactgtcgaactt
ggaacaactcaagatgtagcgattgaatttgctgaaaactcaatgtttcttccagatgga
actgaatatagcggagaggtcaaagctgcgatcaatttcatagacccgtcaaacagagaa
aattcagacaatatacccgcacagcttctaactgaggatgtcgacggagagggtcctggc
ttattgtcgtccaccggaatgttgcaaactgacattaaaaccgcagatggaagacagttg
aatgcacgcggggtacaaattgagttgatcacggatggactctcacaagatgaaactgac
ggagttaaactatacaggctcggaacagaggacggcgtttggcaagaagtttctcaaatg
aatacatcgtcaggaacttcattgagaagacgaaaaagaagtaatcatgcgtctgttatt
acacgtattgacataagcagcgttcgtcaaatttggaatctagatgcattagtttatcca
tattgtcatatgaaagttcgagtattcagcgatgcccaatatctcgagtcctcgcaagta
aatggaattgttgtgatctcattatacgcaaggtctacaaacggagcgtgggcgaattat
cttagaagatatgcatataatggagtttgtgtttcggttccatgcaacgggaattggttc
gacatcgctcaagtatatgctgaagacaatgactacatagttgttgagcccaaagtgcca
gatgacatccagactacactaaagtttgagaacaaattgaattacttcactgtgcaaata
ccaaaaaatgaaaatgtccatggctcaaatgggcccatatacagataccactatgaatgt
tatagtgcgccgttcggagataatcattttcgattatccagagttttacctgaagatatt
gaagtgaatacaattcccatagacgaaaacaacattttttcaccttggataaatgatctg
ttttcttggtggccgaatagaaatctcttcaaagcttgctatgtgaaagttaagatattg
ccaattgatgccaacgaagacgacttgaaagagtggacagttgaggcaatcagccgtgga
ggaacacatgcagttacaaaaggaaaggaatacggtcgtagaatatctcgaggaaatggc
ctaacagcatgtgttgaatacaagtgtccagataccctatcagataatgaatttgacaga
acggaagtgaccatcactccaaaactgaacggattcaattttgcttttgtgatcccacca
aacataacaatcaacacaagctcatttcaagacatcgtggatgaatatcaaagggaaata
gaaactttgttgggtaagccgagtctcacagctccagcactcgcggctcatattccagaa
cttggtatcttctatagtgaagcaattcatccaaagctggctaaaactgaagcgaggcgt
aactgtattcaaggttcggctgtcctaacattctcagtttctgctgcggaaatatctgga
tctggctccggctctgggtccggatctggcgattaa
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