Styela clava (leathery sea squirt): 120334307
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Entry
120334307 CDS
T07291
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120334307
Spliceosome [BR:
sclv03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120334307
Other components
Complex C specific factors
120334307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
GDNF
RMNT_CmcI
RXT2_N
Motif
Other DBs
NCBI-GeneID:
120334307
NCBI-ProteinID:
XP_039257715
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MPPKMSNRQRKIAAMFAADSEEENEMEKFELTNDDIANEFNPDRPQFKQTKEQALYGIWA
KSSENNYGKKKRDFSAPVTFISGGLKEGEKRQRYDPEEEENMDDYDVEGRQTKETKPVTL
HSVQKPKPKPSTSAVGTSGSGGHAYSLTAKQKQKEKMATQFGSFERHTKGIGMKLMKKMG
YKVGKGLGRDNQGIVNPIEAMKRTKKAGLGAAGTERTKQSYIHFPTQDSEEEEEKDFKEQ
ISRWRKDGVDRNQKKYVYKTVDELKKSGKKIKKKKDGNSGSETALSSALANVKVIDMTGR
EQKVFSGYHAIAGRHAVDPDASSSSDEDYDNDRQRAGKEGGFSCPELEHNLNMLLESTEQ
KILHNDRQHDYEKDRVVSLKHQQDQLRTTLQQEEEEIQKLERLLQVVCQCEDRSNSDVEC
ESFLDELAEVFAELQEKYFAEYKMFELSDLATAFVIPQMKKYFASWNPLKSPSHGTSEMK
RWKTLLELDAASYSLQNSMSNTSNSDMYQYLVWEVWMPRVRTATYQWNVRDCDSMVELVE
QWMPLLPSWILENLLMQLILPRLQQEVESWNPLTDPVPLHSWIHPWLPLLEQKMEPLYAP
IRQKLGNALQMWHPRDPSAKVILEPWHEVFSRGSWDAFIIKNIVPKLEKCLRDFIVNPHD
QSLADFQCVMEWESLIPRPSLVSMLETNFFPKWLRALSSWLNSSNVDYEEVSRWYTGWKK
TLPEGLMTNSFVKDRFKQALEMMNRAVTGRPPRNVDMDAEDFEPNRAAAPARPSHPLSQS
VQSSSVPMNFRDLIQQRAEERGLVFVPLKSNPDGKTVYRLGSRAVYIDRSVIYMKEGDAF
LPLGLSAALDKASVG
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaatgtcgaaccgtcaaagaaaaatagcggccatgtttgccgctgatagt
gaagaagagaatgagatggagaaattcgaattaacgaatgatgacatcgctaacgaattc
aatccagatcgaccacaattcaagcaaacaaaggaacaagctctttatggaatctgggca
aaatcatctgagaacaattatggcaaaaagaaacgcgatttctctgcaccagtaaccttt
atcagtggaggtttaaaagaaggagaaaagcgtcaacgatacgatccagaagaggaagag
aatatggatgattatgatgttgaaggaagacagactaaagaaaccaaacctgtaactcta
cactcagtccagaaaccaaagcctaagccttcgacctcagcagttggtaccagtggatct
ggtggtcatgcatatagtttaacagcgaaacaaaaacagaaagaaaaaatggcgacacaa
tttggttcatttgagaggcatacaaagggaataggtatgaaactgatgaaaaaaatgggt
tacaaagttggtaaaggtttgggtcgagataatcaaggtatcgtgaatccaatcgaagcg
atgaaaagaacaaagaaagccggattaggagcggcaggaactgaaagaactaaacaatcg
tacattcattttccaacacaggattcagaggaagaagaagaaaaggattttaaggaacaa
atatctcgatggaggaaagatggtgttgatcgcaaccagaagaaatatgtttataaaact
gttgatgaattgaaaaaatctgggaagaaaattaaaaagaaaaaagatggaaattcaggg
agtgaaactgcgctttctagcgctcttgccaatgtgaaagttatcgatatgactggacga
gaacaaaaagtcttttcagggtaccatgcaatagcaggacgacatgcggttgacccagat
gccagtagcagtagtgatgaagactacgataacgatcgacaaagggctggaaaggaagga
ggattctcttgtcctgagctcgaacataatctcaatatgttgctcgaatctacggagcaa
aaaatattacataatgatcgccaacacgactatgaaaaagatagagttgtgagtttaaaa
catcaacaagatcaattaagaacaacattacagcaagaagaagaagaaatacagaaacta
gagaggttacttcaagtagtttgtcaatgtgaagatcgatcaaactcagatgttgaatgt
gaatcgttccttgatgaattagcggaagtatttgctgaattacaggagaaatattttgct
gagtacaagatgtttgaattatctgatcttgccactgcttttgtaattcctcagatgaag
aaatattttgcaagttggaatcctctcaaatcaccgtctcatggaacatctgaaatgaaa
agatggaaaacactgttggaactggatgctgcgtcgtattctttacagaattccatgtcc
aatacaagcaacagtgacatgtatcaataccttgtatgggaagtatggatgcctcgtgtt
cgaactgcaacttatcagtggaacgtcagagattgcgattcaatggttgaactggttgag
caatggatgcccttactaccttcatggatactggagaatctgttaatgcaattgattctg
cctcgtcttcaacaagaagttgaatcatggaatcctttgacagatcctgttccgttacat
tcgtggattcatccctggttgccgctgttagaacaaaaaatggaacctttgtatgcgcca
atcagacagaagttgggtaatgcattacaaatgtggcatcccagagatccatcagccaaa
gtaatcctggaaccatggcatgaagtcttttctcgaggaagttgggatgcttttataata
aaaaatattgttccaaaattagaaaaatgtcttcgagattttattgtcaatcctcacgat
caatctctagctgatttccagtgcgtaatggaatgggaatctctcatacctcggccttct
ctcgtctcaatgctcgagacaaattttttcccgaaatggctccgagcgctgagctcttgg
ctaaattcgtctaatgttgattatgaagaggtttcacgttggtatactggatggaaaaaa
actttgccagaaggattgatgacaaactcatttgttaaagacagattcaaacaagcatta
gaaatgatgaacagagcagtaactggacggccacctaggaatgtagacatggatgcagaa
gattttgagcctaatagagcagcagcaccagcgcgtcccagccatcctttatctcagtca
gtgcaatcatcatccgtcccgatgaattttcgagatcttatccaacagagggcagaagag
agagggcttgtattcgtgccactcaagtctaatccagacgggaaaactgtatacaggctt
ggttccagagcagtgtatattgatagaagtgtaatatacatgaaggaaggagatgcattt
ctacctctgggtttatcagctgctttagataaagcatcagttggatga
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