Styela clava (leathery sea squirt): 120334339
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Entry
120334339 CDS
T07291
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120334339
Cilium and associated proteins [BR:
sclv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120334339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_6
TPR_14
TPR_8
TPR_7
TPR_16
TPR_19
ANAPC3
TPR_10
TPR_11
TPR_17
TPR_9
TPR_15
ARM_TT21_4th
SNAP
ARM_TT21_5th
Coatomer_E
ARM_TT21_N
RPN7
ARM_TT21_C
TPR_MalT
HAT_PRP39_C
ARM_TT21_2nd
HEAT_Nup120
HECW_N
Motif
Other DBs
NCBI-GeneID:
120334339
NCBI-ProteinID:
XP_039257756
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSFNLDNLRLATEEENDDLYSGFNEYNPMYDTANLAEDEGFMNAVKTSHGRRPPMTALRG
ANPVLGRNAIPPPSSFGRPVTGAVADGSARPMTSVAGAGFSSNLGKGAAFDPLSQAGKDR
PGGIAPPLDPLSENGPEEKVKALEKRVGELIEESVVAQSKGNLTLALDKAKDAGRKERAL
VRQREQSGLSENINLDLTYSVLFNLAVQYEANEMFPEALNTYNVVVKNKMFSNAGRLKVN
MGNIYFNQGQYMKAIKFYRMALDQVPNTHKDMRIHIMQNIGAVFLKMGQYNEAATSYEHI
MTEKPNFRTGFNLILCYFALGDSEKMKKAFQKLLSVNLGIDDEDKYTTNPENTQESVYLD
AIKNDLLRQAERKQRSTAEWTILSAAKVIAPAVENTFAAGFDWCIDQVKNSPCLDLANDL
EIHKALMYLKERDFPQAVQILKTFEKKETQVKCQAATNLSFIYYLQGNLADARRYADIAT
KADRFNAPSLTNMANCLLSEGDVSGAETLYKEALENDSSCHEALFNLGLLYKQRQRLDES
LDCFLKLHNIMRHDSQVMYHIASLYEHMEDWSQAQEWLMQCVGIASTDPSILSHLAKICE
KDDTNADLSQAFQYRYDAYRLFPADIETLDWLGGYYIQSQFYEKAVRYYSRAAVIQPKEV
KWQLMVASCYRRSGNYQLAFEKYKSIHNQFPDNVECLKFINRLCVDLGLQNELQEYANKL
KKAEKSKEMREQRASSGGRRGGSGRGDRTPASANSSDGNLHNGSAGSGSAKRRTLPEADG
YSTTKRDIDSSYVDPLGPAPERPKTAARQRQEIADEFDDVEVDDDLLPV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaatttagataatcttcgactggcgacggaagaagaaaatgatgacttgtat
tctggattcaacgaatataaccctatgtatgacacagcaaatctggcagaggatgaaggt
tttatgaacgctgtaaaaacgagtcacggacgacgacctccgatgacggcactacgaggc
gcgaatccagtcttaggtcgaaatgctattcctccaccttcatcgtttggtcgtccggtt
acgggtgccgttgctgacggaagtgctcgaccaatgacctccgtcgcaggagcaggtttc
tcatcaaatttgggtaaaggtgctgcttttgatccattaagccaggcaggaaaagataga
ccaggtggcatcgcccctcctcttgacccactatcagaaaatggaccagaagaaaaagta
aaagcactcgaaaagagagttggagaactgattgaggaaagcgttgttgcacaaagtaaa
gggaaccttacccttgcacttgacaaagcgaaagatgccggtcgtaaagagcgagcgctc
gtacgacaaagagagcaaagcggtctgagcgagaacataaatcttgacctaacatattct
gttctattcaatcttgcggtccaatacgaagcgaacgaaatgttccctgaagctttgaat
acttacaacgtggttgtgaaaaataaaatgttcagcaatgctggtcgcctcaaagtcaac
atgggaaatatatatttcaaccaagggcaatatatgaaagcaattaaattctatcgtatg
gctcttgatcaagttccaaacactcataaagatatgagaattcatatcatgcaaaatatt
ggagctgtgtttttaaaaatggggcaatacaatgaagcagcgacgtcgtatgaacatatt
atgacggaaaagccgaacttcagaacaggtttcaatttgattctctgttattttgcgctc
ggtgatagtgaaaagatgaaaaaagcttttcagaaattgctttctgttaatttaggaatt
gatgatgaagataaatacacaacaaacccagaaaatacgcaagaaagtgtgtatttggat
gctatcaaaaatgatttgcttcgccaagctgaacgcaagcaaagatcaacagctgaatgg
accattttaagcgctgcgaaagtcatcgcacctgcggttgaaaataccttcgctgctgga
tttgattggtgtattgaccaagttaaaaactcaccatgccttgacctggcgaatgatcta
gaaattcacaaagctctaatgtatttgaaggagagagattttcctcaagctgttcagatt
ctaaaaacattcgagaaaaaggaaacgcaggtcaaatgtcaagctgcgactaatctttca
tttatttattatttgcaaggaaaccttgctgatgcgcggagatacgcagacattgccacg
aaggcagaccgattcaatgctccttcgttaacaaacatggcgaactgccttctttctgaa
ggagacgtaagcggagcagaaacactgtacaaagaggctttagagaacgattcatcgtgt
catgaagctttattcaatctcggacttttgtataaacagcgacagcgtctggacgaatct
ctcgactgctttttgaaattacacaacataatgcgacatgattctcaagtcatgtatcat
attgcgtcattatacgagcatatggaagattggagccaggctcaagaatggttgatgcag
tgtgtgggaatcgcatccacggatccaagcattttatcacaccttgcaaagatttgtgaa
aaggatgacacaaatgctgatttgtcgcaggcgtttcaatatcgttacgatgcgtatcga
ctatttcctgcggatattgaaactctcgattggctggggggttattatattcaatctcaa
ttttatgaaaaagctgtgaggtattacagtcgagctgctgtaatacaacctaaagaagta
aaatggcaattaatggttgcgagctgttaccgacgaagcggaaattaccaacttgcattt
gaaaaatacaaatcgattcacaaccaatttcccgacaatgtagagtgtttgaaattcatc
aaccggttatgcgttgacctcggactccaaaacgagcttcaagaatatgcaaataagttg
aaaaaagcagaaaaatcgaaagaaatgagagaacaacgggcaagcagtggtggccgtaga
ggaggaagcggtagaggggatagaactcccgcgagtgcaaatagttcagatgggaatctt
cacaacggtagtgctgggagtgggtcagcaaagcgacgaacacttccagaggcagatgga
tacagtacaacaaagcgagatatcgattcatcctatgttgatcccctaggacccgccccc
gaacgtccaaaaaccgctgcgagacaaagacaagaaattgccgatgaatttgatgacgtt
gaagtcgacgatgatcttctgccagtttaa
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