Styela clava (leathery sea squirt): 120334449
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Entry
120334449 CDS
T07291
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120334449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120334449
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120334449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
120334449
NCBI-ProteinID:
XP_039257895
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSGVELDDILQQAERLTADLDGGNELPRVQRNLQQILDAGQRLCSGTPATHDNAEVRASL
LLSRRGHEIPQISDRLRTLTSAAQTLEPLEPVCDTDIEGFLRNERENAILAVLEEQKSKA
FQAVEKYYWQSRMSEWEKQKQSILGKLIGSDGTLNFTQEFSEAGRVVDDYNTSRSVSRSA
MDTWEVGYAQQVYIYNEKVLSGSIRPNFVDLCQITAEKIRDENIISLWNMVKYVLNAEIS
VADKSVLARRLSKNVISSVVGQARSYLEDMYRDYMMKCVHQRPHVAQLGGRPGTINLVKS
FLKVKPPHQVHEYRNIDWAILYFCLRCGDLEAACEVAQSLDGTFPELSGWINEYAKDRTL
SPTSENKLLLQYKRSIRNAGNPYAIAIFCILGHCDFMESHTEIAGTTDDYLWVKLCQVVV
EKSSSTQSEVLTLLTLQKLLADYGESHFNATSNPLLYFQVLFLTYQFEAAIEFLSRFPSL
RCHALHVALALHEVNLLVKATNLHDGLISSKPSDQSQFTNVQRLNLPRLLMMYTRKFELT
DPREALNYLYFLRDERHENESLFLQCTSELIRETGEFSMLLGGLNPDGSRRPGLVDRYCA
GDTKELIAKVAADTEAKGLFEDAIRLYDLCGNYDNVITLLNRLMCPLLPAADRAHSDRVR
IKDLAVSIAQRYRSLAVELSQDLSSTFYVLLDLLTFFDQYHLRRYDTAMDIINQLHILPT
KPEQVQDRVRNFSAFSEEVRQNIGEILLATMNMLASQKKALQSNKIVEVGATRSYASALL
TFAGMLPYQLPGDITSKLVQIEVDMM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgttgaacttgacgatattttacaacaagcagaacgactgacagcggatctt
gatggtggtaacgagttaccaagagtccagcgtaaccttcaacaaattttggacgctgga
caaagactctgttctggaaccccagcaacccatgataatgcagaagtcagggcttcattg
cttcttagtagacgtgggcatgaaattccgcaaatttctgatagactgaggacgttaaca
tcagctgcacagaccttagagccattggaaccagtatgtgatactgatattgaaggcttt
cttcgaaatgaacgagaaaatgctatacttgctgttctagaagaacaaaaaagtaaggct
tttcaagctgttgaaaaatattattggcaatctagaatgagtgagtgggaaaaacaaaag
cagagtatacttgggaagcttattggcagcgatggaactttgaatttcacccaagaattt
tctgaagctggaagagtagttgatgactacaatacttctcgttcggtttctcggagtgct
atggatacttgggaagttggttatgcacaacaagtttacatctataatgaaaaagtatta
tctggatcgattcgaccaaatttcgtagatttgtgtcaaataacggctgaaaaaatacga
gatgaaaatattatttcgctatggaatatggtgaaatatgtcctgaatgctgaaatatct
gtagcggacaaatctgtccttgcaagaagattgtcaaaaaatgtaatctcttctgtcgtt
ggccaagctcgaagttatttagaagacatgtacagagattacatgatgaaatgtgtgcat
cagcgccctcatgtggcacaacttggtggacgaccaggcactatcaatcttgttaaaagt
tttttgaaggtaaagcctccgcatcaagttcatgaatacagaaatatcgattgggcgatt
ttgtatttttgtcttcgatgcggagatctcgaagctgcttgtgaagttgcgcaatctttg
gatgggactttcccagagctttcaggttggattaacgagtatgctaaagatcgtactttg
tctcctacttcggaaaataaattattattacaatacaaaagatcaattcgaaatgctgga
aatccatatgcaatcgctatattttgtattctcggtcattgcgattttatggagtcacat
acagaaatcgctggaacaactgatgactatttatgggtaaagttatgtcaagttgtcgtt
gaaaagtcctcttcaacgcaatccgaagttttgaccttgctaacgcttcaaaaacttctc
gctgattatggagaatcccacttcaacgctacttcaaaccctctactgtatttccaagta
ttgtttttgacttaccaatttgaagcagcgattgaatttttgtctcgatttccgagttta
cgatgccatgcattgcatgtagcactagcgcttcacgaagtaaatctattggtgaaagca
accaatctacatgacgggttgatcagttccaagccatctgaccaatctcaattcacgaat
gtacaacgactaaatttaccaagattgttaatgatgtacactcggaaatttgagttgact
gacccaagagaggcgttaaattacttgtactttctcagagatgagagacatgaaaatgag
agtctcttcttgcaatgtacgagcgagctgattcgtgaaacaggcgaattctcgatgctt
ttaggcggtttgaatcctgatggtagccggcgccctggattagtggatagatattgtgct
ggtgacacaaaggaattgattgcaaaagtcgctgcagatacggaagccaaaggtctcttt
gaagatgctatccgattgtatgacttatgtggaaattatgataatgttatcacgcttcta
aataggcttatgtgtcctctactaccggctgccgaccgtgcccattctgaccgagttcgt
atcaaagatcttgctgtttcaattgctcagagatatcgctcacttgccgttgagctttca
caggatctgagttccacgttttacgttctgcttgacctcctgaccttttttgaccagtat
caccttcgtcgttacgacaccgcaatggatattataaatcaacttcatatcttgccaact
aagcctgagcaagttcaagacagggtgaggaatttttctgcgttttccgaggaagttcgt
caaaacattggggaaattctgctagctacgatgaacatgttagcatctcagaaaaaggct
ctgcaaagcaataaaatcgtagaagttggggcgacacgttcttacgcaagtgctttactg
acttttgctggaatgcttccttaccagttacctggagatatcacatcaaaactagtgcaa
attgaggttgatatgatgtga
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