Styela clava (leathery sea squirt): 120334501
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Entry
120334501 CDS
T07291
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120334501
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120334501
Ubiquitin system [BR:
sclv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
120334501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
PDCD9
Motif
Other DBs
NCBI-GeneID:
120334501
NCBI-ProteinID:
XP_039257945
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MELQSVLRIRMCQKLWLQHNIQKCSFSTCASLWLRQPIKSKRRVVFSSPLAAKAQKPIYP
RDTKEVFLAQRRRPQWDFPLGDDQRASWKHKQWYDPYFDKWVPNFIPPKMKTFSLYKKNK
RGIIEDQETLENKFKLLLDHDRKAKYIIPPLNMEFTRNASYYYQHLTHTKFVHGMPYNIE
SMQLEDSVIENFESFLTTAIQLETHFSKKSSVEKSRKQRADRLLSNIVQYLMDITSSQSI
FEGCELDRNPENSMFWQKGRGFHKYTMRDDLPITFQSHDNPLYQIRTQKPLNEFTPWMEE
FMLSGEIPFPDDDIIPSCYRLFKKQYRNTVTPGFRYQAGELPLNYQEALEENKLLDLPPP
ITDPCKFGHTQFISLPVPESFNRDWYKANLEHCDITEEIEEHMKAHGIMSGWTWSAPVAY
YMGHWMDNDITKPICVQTVITDGEYISFFCYQLNTVAIDPENLDEKIHEKRNICYGTPMM
RLYNKVEGTDDVQLYRNVTTLLLKFIHNGCDNKAANIDDVIEHNKSLEVQEFDLENPLIE
LQKPKHVLEKEEREAVLQIARQEEIARNKNLKDKVIDWVKGLAECDATIVMEFPIQSEEY
AMDHIVVEEASIALVREFLNRKGCKNSLSALDDELPRGDASICNRAELAQTLHIAPLIRK
NKSLTDPFRTIIEIIVWDVIKKHKKLTNENNQSKLTRPSTAKAKLYSASTPTGPETLELK
DVNFENNADVSKPMKYDQFQDSMLKHRRQQPESTRKTRSYNPSINPMIISGLRVSNSLTK
HRQKKASSVAEMLSASPDKIISSHDTISQQDGKQKTKNVVNSTDHTEKSTETNSAIVAEN
KTHLRNSSDRYEQSSPGKKKQDTVLVDFDDEEWTEDSKCEKWISGLDKLSFKYNTNKSNE
VYHAQPQQKVLESRNESILNKNQKPQKISRKVGFNLPQSGMPLDFQSAVKLRKIVFGSAS
VRGFPEQWINQSFMFRDCKDERTVRLRFGIIQKKGGPCGLLAAVQSYVLKHLLFGKVGND
GSEIKKAEPSALNCKNEIRTSCLAEAIIEILWQAGGGRRAVVALLSNRQSFSPTGNYKED
SITEFIVTKNCQSLESLHHTIYNSISQFESGRGAAILLLYSAILSRGIGEVTSDMDDPGN
ILMGAHSYCTQEMVNLLTSGFAISNTFNDTVQLDGGLILKGAKARSNIGLLSLFEHYGSC
NVGSYLKTPRYPIWIVCSESHFSVLFCLNRDLVNDWTVERLFDLYYYDGLANQDEEMRLT
VNTMQKPQPKKDNDLIPPLELCIQTKWPDSVIDWNGTDPLL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggagttacaaagcgtcttgcgtatcagaatgtgccaaaagttgtggctgcaacataac
atacaaaaatgtagctttagtacatgtgcatcactttggcttagacaacctattaaaagc
aaacgcagagttgtttttagtagcccattggcagctaaagcacaaaagccgatatatcct
cgagatactaaagaagtttttttagcacagagacgaagaccacaatgggattttccactg
ggagatgatcagcgtgccagttggaaacataaacaatggtatgatccatacttcgataaa
tgggtaccaaattttattcccccaaaaatgaaaactttttctctttataaaaaaaataaa
agaggaattattgaagatcaagaaacactggaaaacaaatttaaacttctacttgaccac
gatcgaaaagcaaaatatattattccccctttgaatatggaatttacaagaaacgcatct
tattattatcaacatttaacgcacactaagtttgttcatggaatgccatacaatatagag
tctatgcaacttgaggattctgtcatagaaaattttgagagtttcttaacaacggcaata
caattggagactcattttagcaagaaatcatcagttgaaaagagtcggaaacaaagagct
gacagacttctttccaatattgtacaatatttaatggatataacttcatcacagagtatt
tttgaaggctgtgaattggaccgtaacccagaaaattcaatgttctggcaaaaaggccga
ggtttccataaatatacaatgagagatgatttacctattacatttcaatcacacgacaac
cctttgtatcagattcgaacacagaaaccactcaacgaatttactccgtggatggaagaa
ttcatgttgagtggagaaataccatttcctgatgatgacataattccaagttgctatagg
ttatttaaaaaacaatataggaacactgtcacaccaggatttcgataccaagctggtgaa
ctcccattaaattatcaagaagcattagaagaaaacaaactccttgatcttcccccacct
ataactgatccatgtaaattcgggcatacacagtttatatcattaccggtaccagaaagc
ttcaatcgagactggtacaaagccaacttggagcattgtgacatcacagaagaaatagaa
gagcatatgaaagcccatggaataatgagcggatggacttggtctgctcctgtggcttat
tatatgggacattggatggataatgacatcacaaaaccaatatgcgtacagactgttatt
actgatggagaatatatctcattcttctgttatcaactcaatactgttgctattgatccg
gaaaatttggatgaaaaaatccacgagaagagaaatatttgttatggaacaccaatgatg
aggctttataataaagttgaaggcaccgatgatgttcaattgtatcgtaatgtaacaact
ttacttttaaaattcattcataatggttgtgataataaggcagcaaatattgatgatgtt
atcgaacacaataagtctttagaagttcaagaatttgatttggagaatccgttgattgag
ttgcagaaaccaaagcatgttctggaaaaggaagaacgggaagctgtactccaaatagcg
agacaggaagaaattgctcgaaataagaatttgaaggacaaagtaattgattgggtgaaa
ggattggctgaatgtgatgcaacaattgtcatggagtttcctatccaatcagaagaatat
gcgatggatcatatagttgttgaagaagcatcaatagcattagttcgagaattcttaaat
cgtaagggatgtaaaaattcattgagtgctcttgacgatgaactaccaagaggtgatgcc
agtatatgcaatagagcggaattagcacaaacattacacatagctccccttattcgtaaa
aataaaagcttgacggatccatttcgaactataattgaaattattgtttgggatgttatt
aaaaaacacaaaaaattaaccaatgaaaataatcaaagtaaattaacacgacccagtaca
gcgaaagctaaattgtattctgcttcaacaccaacagggcccgagacgttagaattaaag
gatgtcaattttgaaaataatgcggatgtatcaaaacctatgaagtacgatcaatttcag
gactcgatgctgaaacataggaggcaacaacctgaatcaactcgaaaaactagatcatat
aatccttctattaatcctatgataatttctggtctcagagtttcaaattcactcacgaag
cacagacaaaagaaagctagctctgttgctgaaatgttgtcggcaagtccagataaaata
atctcttctcatgatacaatttctcaacaagacggaaaacagaaaaccaaaaatgttgta
aattcaactgatcatactgagaaaagtacggaaacgaactccgcaatagttgctgagaat
aaaacacatctgaggaattcgtcagatcgctatgagcaatcgtcacctggaaagaaaaaa
caggacactgtgctagtagattttgatgatgaagaatggaccgaagatagtaaatgtgaa
aaatggatttcaggactggataaactgagttttaaatataatactaacaaatccaatgaa
gtataccatgcacaaccacaacaaaaggttttggaatctaggaatgaatcaattttaaat
aaaaaccaaaaaccgcaaaaaatttctagaaaagtagggttcaatttgccgcaatctggc
atgccgttggatttccaatcagcagtaaaacttcgcaaaattgtgtttgggtctgcaagt
gttcggggattcccagaacaatggataaatcagtcgtttatgttcagagactgtaaagat
gaacgtacggtacgtttgagatttggaatcattcagaaaaaaggaggaccatgcggcctt
cttgctgctgtacaaagttatgttttgaaacatttattgttcggaaaagttggaaatgac
ggatcggaaatcaaaaaagcagaaccgtctgcactaaattgcaaaaacgaaatccgcaca
agttgtctcgctgaagcgattattgaaatcctatggcaagcaggtggcggccgccgagca
gtcgttgcgttactttcaaataggcaaagttttagccccaccgggaattataaagaagat
agtattactgaatttattgtaacaaaaaattgccaatctttagagtctttgcatcacaca
atatataacagtatctcacaatttgaatctggacgaggcgctgcgatcttattactatat
tcagctatattatccagaggaatcggagaagtaacatcagatatggatgatcctggcaac
atattaatgggagcacattcctattgcacacaggagatggtaaaccttctcacatcaggt
tttgctatttccaatactttcaatgacacagtgcaattagatggaggtttgatattaaaa
ggtgccaaagctcgttctaacataggtttgttgtctttgtttgaacattatggttcatgc
aatgtcggaagttacttaaaaacccctaggtatcccatttggattgtttgtagcgagagt
catttcagcgttttgttttgtttgaatcgtgatcttgtcaatgattggacggtagaacgt
ttgtttgatctgtactattatgatggattagccaatcaggatgaagaaatgagacttact
gtgaatacgatgcaaaaaccacaaccaaaaaaagataatgacttgattccgcctttagaa
ctttgcattcaaacaaaatggcctgattcagttattgattggaatggtactgatcctttg
ctttag
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