Styela clava (leathery sea squirt): 120334884
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Entry
120334884 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120334884 isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120334884
03036 Chromosome and associated proteins [BR:
sclv03036
]
120334884
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120334884
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120334884
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120334884
UBL E3 ligases
120334884
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120334884
Cilium and associated proteins [BR:
sclv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120334884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-Nse
zf-ANAPC11
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
120334884
NCBI-ProteinID:
XP_039258333
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MVKSPKRRRMSASSHHSSEGKAVGMDMEEAATTTKDSDKKEGESSPARCPICLAPPENPA
KSESCSHFFCFICLKTWSKQKAECPLCKMPIRTIYYDIKSDTEFHEYHVQQRPAETRYQF
PNSSYRMINIESFDNWWHGRMLEFRNQQRRRRENSLAAREALSNVGLIRERRMHYWNKKK
VHRVDTGNRVRDISAEFYRQNPSQMHRLEPWLRRELTVLYGAHNRLLIRRVRDLIMSAVT
TIGMTSPTFYSTIQPYMLEHTAQFVHEFVSFAKSPYDMVQYDRHAQYDSTSTSEESQRRS
GGGSRDSVTVPRRRRSRNPTRIIRWEESPDAANNVPGEPTSQSVMLSNTSWGEDLGTTYP
PSNAPYPPSSSTSTLSYPRSSNRAYDAYPTPPPPRDFPVAAPEWNVPYSRMMRYMNRPPT
IDREVEAPLVHQSIDLHRPGGSSARHYDRMEVYRRHFDRHSRRRRLEESRKLVKAVSFGG
SETIREPDPPEVIVISSDSSDKEQEPGPSDRDFRRRSPVLLHYHPTEAGTSRSNAESTAD
DQIPMEVKIENSSESQKHDSASANSDSEDSEIEFVKYVKPPHLRTPEAFINISSTDEDQP
GPSTRGGYYEDRNKKPKPIVTSSSSSSSSEESSSDERNPDSKNRRRKSTGSYGHRDVLQR
TRDFLNRARNASRSHSNDDVTIPSIATVTPVDDTEFSGEPFISPSDHSPEAMPIPTRPVT
SPTPLMTSSTPVILSPMMSSDNAMDSLQTASNSVTSQSADKQNPKKIFEKGKVTINFEIP
GMKGIPLYSSDSDSEIDVGMETKRTPLEIYSAKPYEVENSQRSRSRDEFQNNQESPQIHG
ELNSPNYSFTSSSSSENRERIRSHSSDLNSQRNSRTHDQFLVNSNAKEPQRHRSSSLHKK
KKHSRKSHKKRSRHHGESDSLTKHHRESRSSHEDDHNHKSKRHRKKSSKHHKSRSSSVEF
VSRIRNY
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtctccaaaacgtcggagaatgtcggcatcaagccatcactcttcggaaggg
aaggctgttggaatggacatggaggaagcagcaacaacaacaaaagacagcgataaaaaa
gaaggggagtcgtctccagccagatgcccaatttgtctggcacctcctgaaaatccagct
aaaagtgaatcctgttctcatttcttttgcttcatttgcctgaaaacttggtcaaaacag
aaggctgagtgtcctctctgcaagatgccaatacgtacgatctattacgatataaagagt
gatacagagttccatgaataccatgtacaacagcgacctgccgaaacaagataccaattc
cctaattcatcgtatcgaatgatcaacattgaatcctttgacaactggtggcacggcagg
atgttggagttcagaaatcaacaaagaagaagacgtgagaacagcctggctgcccgagaa
gctttgagcaatgtaggtctcatacgggagagaagaatgcattactggaacaaaaaaaag
gttcatcgtgttgatactgggaacagagttcgagatatttccgctgaattttatcgccaa
aatccgagtcaaatgcacagacttgaaccttggttgagaagagaattgactgttctttat
ggtgctcataacaggcttttgatcagacgtgttcgggacctaataatgtctgctgtgaca
acaattggaatgacatcaccgactttttattcaacgatacagccgtatatgctggaacac
actgcacaatttgttcatgaatttgtgtcttttgctaaatcaccatacgatatggtgcaa
tatgataggcatgctcaatatgattctacatctacgagcgaagaatcacaacgacggtca
ggtgggggcagtagagattctgttactgttccaagaaggaggcgaagtagaaaccccacc
aggattatcagatgggaggaaagtccggatgcagcaaataacgtccctggtgaacccact
agccaatctgtcatgctgtccaatacttcatggggggaagatttggggacaacatacccc
ccatccaatgccccgtaccccccatccagttcaacatcaacattgagttacccaagatca
agtaatcgtgcgtatgatgcttaccctactcctccccctcccagggacttccccgtcgcg
gctccagagtggaatgttccgtattcccgcatgatgagatacatgaacagaccaccgaca
attgatcgtgaggtagaagccccgctggttcatcaatcaatagatttacatcgtcccggt
ggttcatcagcgagacattatgatcgaatggaagtctacagaagacatttcgatcgtcat
tctcgacgtcgaagattggaagaatctcgtaaattggtcaaagccgtttcgtttggtgga
tctgaaaccatccgtgaaccagacccaccagaagtcatcgtgatttcgtctgattcaagc
gacaaagaacaggaaccaggtccatcagaccgtgatttcagacgcagaagtccagttttg
cttcattatcatccgacagaagccggaacatcgcgaagtaacgctgaatctacggcagat
gatcaaatccctatggaggtcaagatagaaaatagttccgagtcacaaaagcatgactcg
gcttctgcgaattctgattccgaagacagtgagattgaattcgtcaagtatgtgaaaccc
ccccaccttcgcacccctgaggcatttataaacatcagctcaacagatgaagatcaacca
ggaccaagcacaagagggggctattatgaggacagaaacaagaaacctaagcctattgtg
acatcatcgtcgtcatcttccagcagtgaagagtcatcttcagatgaaaggaatcccgat
tcaaaaaatcgtcgccggaaatccactggatcatatggtcacagagatgttttacaaaga
acgagagattttttgaatcgagcacgaaacgcatctcgttcccatagcaatgatgatgtc
acaataccctctattgccacggtaactcctgtcgatgacacagaattctctggtgaacca
tttatttcaccaagtgatcactcacctgaagctatgccaataccaactcggcctgtgacc
tcaccaaccccacttatgacatcatcaactcctgtgattttatctcctatgatgtcatca
gacaatgcaatggattcattacaaactgcaagcaattctgtgacatcacaaagtgctgac
aagcagaacccgaagaaaattttcgaaaaaggaaaagttacgattaattttgaaatacct
ggaatgaaaggaattccgctatatagttcggattctgactcggagatcgatgtgggaatg
gaaacaaaacgaacaccgttggaaatttattctgcgaagccttatgaagtggaaaattca
cagcgtagccgttcaagagatgaatttcagaacaaccaagaatctcctcagattcacggt
gaattgaattcaccaaattatagcttcacttcttcatctagctcggaaaatcgtgaaaga
atacgatctcattctagtgatttgaattcacagagaaattcacgaactcatgatcagttt
ttggtgaattcaaatgctaaagaacctcagcggcatagaagttcatctttacataaaaag
aagaaacactcacgaaagtctcacaaaaaaagatcacgacatcatggtgaatcggacagc
ctcacgaaacatcaccgtgaatctagatcttctcatgaagatgatcacaatcacaaatca
aagagacacagaaaaaaatcatcgaaacatcacaaatcacgatcttccagtgtagaattt
gtctctcgcattcgcaattattaa
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