Styela clava (leathery sea squirt): 120335135
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Entry
120335135 CDS
T07291
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120335135
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120335135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
120335135
NCBI-ProteinID:
XP_039258564
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MGGGDESGSGSDSELEEEDQVVRGGGRKRGRGGGRAMQAQKRSKQDSDVPATLFEVVRQG
KMAMTAVVDDWIEAYKADRNEALLDLIQFFINASGCKGTVTPEMLREASEGFQDVIKRMT
EEFDEDSGDYPLIASGPNFKKFRSNFSDFVQALVRQCQYQIIYDQFMMDNVLTLLTELSN
SQVRAFRHTSTLAAMKLMTALVNVALQLSVSLDNTQRQYEGERAKSANKRASEKLDMLLE
KRKDLEDQQTEIESMLNGIFKGIFVHRYRDFIADIRALCMEEIGVWMKMFPKVFLTDSYL
KYVGWTLHDKQKEVRMKCLMTLQGLYRDDEMTKDLKLFTSRFKDRIVSMTLDKEYDVAVL
AIKLLILILDHCGYDTPVLSSNDSESVYQLVYSVHRPVAIAAAEFLNKQLFANKEVTPGY
TKRGRRRSPNAPLITDLVLFFIESELHEHATYLVDSLWDVASNMLKDWDCMSDLLLEEPA
NDRDQMDSRQESALVDIMVCSVKQAAEGTPPTGRQGFSKKLATRDKRTALEDKVRLTELF
IVALPSLLNKYQVDKEKVTMLLQIPRFFDLELYTTSRLEKHLEMLLRQMSTIIDKHTDAD
LLEQASMTYHKLCDNDYTMCNKAQVERQTVIDTWAENFTLALDIFKDATSDSTNGADEEE
IYNVVQALKRLTQIYMHNNILSCELHPSVSSILQMYQEKPDSVPEDMLEQAIKFLHCDLM
YNLAVVKHQEDGGQSATQDQKLAIAKLRQKVTEFLQSCQELLSQSPHPKVKEASYMALCD
LIVLFSPQLAHSCPNLRPLVQRPSDTVQHLLIDFVNTYVFIVHEDDDDDEEDTAKIDALH
HRRLLLAAICKLFVFNMIELRLAASVFQQYIRFYPDYGDIIKETISRARHANKMACAHTL
ALSIMSLYRETIRMQGGSLDQSSQEYGHLKELARRLSLTFGLDQVKTRDAVAALHKEGIL
FALKKSDDHYNENYPPENLSFLLILVEFSSKLMRQDRKTVVNYLDKHIKPHMLKQQTAGW
IPLVTYRNSLIQGSDDAEIMKQPMKGRRGRKKKNVDGDVDAPRTPMTPATPMSPGAPMTP
MNPVPQHTSTVQRDGVPPKQMRMDDANVSSISYQQHGNQRDLKSWLDSGKEGRRLRQRRD
KNKVSVSEEDTTPKRGGKTSMLASIFDSESQESSDIGDVSEIRKKLRKVQVEDVSERSVR
DEDVIEEVSVSGSNTDEGKKTSTHPIRKRKKTGIEIISDEIDEFGNKNGALTTNTLESSA
GRKGTRRIKERNADKIPNKAMDSDVSGRIIKKKNENLKPRKSVVTDAESMDENDESDFKD
AVESFSPEKIAKKASRVLKKGKNIDMESPAQRRSSRKNRKVFSYNEESPEIESSPKKLLR
ESKQEIQEGGKRTRDARSNRLSEFEQEKSSPAHVSYFKNIQSNPNVTIDDVNVEEELFGF
WDEIERKENDRKDEDTSLSSEESSFEMENADISKKFTDDTTKNEPKETTKIAKIRPDLKN
FAKQSVATTPSISQGSQLSEKEKAEFEKSEKFDQLSGTQSKMEEDGFLSADDTTFISEDE
VFKDARSQKSSLKSPAKVVTTQDVFTSANPFAKFTKNLRGTKLIGKIQSEDEEDFMSEES
LSDENAPLSPLTQRSGATVRTHISDVDVVDLLLDENDSKNQDEMFGAFANVVRDVHSQSS
QNIDLLSGGTTQRSKFTDNADFDLDSLFNSGDEGSESEMDNPFAAALKKAKSSSRHLTSP
MSPMSSDCDEDNFATMFGFGKTKKKTKVLRQPNLMGSTMMTSPGHSMTSPVHQGTPDYHQ
QMRQGGGGYQQIQQQQQQFVVPGQQMMYQQQGYQMMQSPGHMQQQSGMPGQSFYGS
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtggagacgaaagtgggtctggtagtgatagtgaactcgaagaagaagatcaa
gtagttcgaggagggggaagaaaaagagggagaggaggtggaagagcaatgcaagctcaa
aaaaggtcaaaacaagacagcgatgtccctgctacgttgtttgaagttgtacgacaaggg
aagatggcaatgactgctgtagttgacgattggatcgaagcttataaggctgatcgaaat
gaagctcttctagatttaattcaattcttcatcaatgcatctggttgcaaaggaactgta
actccagaaatgttacgtgaggcctcagaaggatttcaagacgttattaaaagaatgact
gaagaatttgatgaggatagtggggattatccattgattgcatctggaccaaattttaag
aagtttcgttcaaatttctccgattttgttcaggctctcgtacgtcaatgtcagtatcag
ataatatacgatcaatttatgatggataatgtattgacattactgactgaattaagtaac
tcacaagtacgggctttcagacatacttctactcttgctgccatgaaactcatgacagca
cttgtgaatgttgcactccaattgagtgtgagtttggacaatactcagaggcagtacgag
ggagagagagcaaaatctgcaaataaaagagcgtcagagaagttggacatgctcctcgaa
aaaagaaaagaccttgaagatcaacaaactgagattgaaagcatgcttaatggaatcttc
aagggaatttttgttcatcgttatcgtgatttcattgctgatattcgagcattatgcatg
gaagaaataggggtttggatgaaaatgtttcccaaagtgttcttgaccgacagttacttg
aaatatgttggctggactcttcacgataagcaaaaagaagttcgtatgaagtgcctcatg
acgttacaaggtttatacagagacgatgaaatgacgaaggatttgaaattattcacgagt
cgattcaaagatagaattgtgtcgatgacattggataaggaatacgatgttgcagttctg
gctatcaagctcttgattttaattcttgatcattgtggatatgacactccagttttgtct
tcaaatgattcggaaagtgtttatcagcttgtgtattctgtgcatcgacctgttgccata
gctgctgccgagtttctcaacaagcaattgttcgcaaacaaggaggtgactccaggatac
acaaaacgagggcgaagaagaagtccaaatgctcctctcattactgatctcgtgttgttc
ttcattgagagtgagctccatgaacatgcaacctatctcgttgattccttgtgggacgta
gcttctaatatgctcaaggattgggattgcatgagtgacttactcttggaggaaccagcc
aatgatagagatcaaatggattcgagacaagaaagtgcattagttgatattatggtatgc
agtgtgaagcaagctgcagaaggaacacctccgactggtagacaagggttttcaaagaaa
cttgctaccagagacaaacgaactgctttagaagacaaagtccgtttgactgaacttttt
attgtcgctttaccatctttactcaacaaatatcaagttgacaaggaaaaggtcaccatg
cttctacaaatcccaagattctttgatttggaactctacacaaccagcagacttgaaaaa
catttggaaatgttgcttcgacaaatgtcgacaatcatcgacaaacacacagatgcagat
ttgttggaacaagcttcaatgacttatcataaactatgtgacaatgattacacaatgtgc
aacaaggcacaagtcgaacgacagactgtcatcgacacttgggctgagaattttactctg
gctttagatatcttcaaagatgcgacttccgactcaacaaatggagcagatgaagaagaa
atatacaatgtagtgcaagcattgaaaagattgacacaaatctacatgcataataacata
ttatcttgcgaactgcatcccagtgtgtcttctatactgcagatgtaccaagaaaaacct
gattcggtcccagaggatatgttggagcaagctatcaagttcctacattgcgatttgatg
tataatcttgcggtcgtaaaacatcaggaagatggaggccagtctgctactcaagatcag
aagctagccattgcaaaacttcgacaaaaagtcaccgagtttttacagtcgtgtcaggaa
ctgttgtcacagtctccacatccaaaggtgaaggaagcaagttacatggcattatgtgat
ctgattgtcttgttctctcctcaacttgcacacagttgtcctaaccttcgacccctggtt
caacgaccatctgacaccgtacaacatttgctcatcgacttcgttaacacctatgtattc
attgtacatgaggatgatgatgatgacgaagaggacactgccaagatagatgctctgcat
cacagaagattattgcttgctgctatctgtaaactatttgtcttcaacatgattgaatta
agactggctgcatcagtattccagcagtatatcaggttttatcccgattatggtgatatt
ataaaagaaacgatcagcagggcaagacatgcaaataaaatggcttgtgctcacacactc
gccctcagcatcatgtcgttgtaccgagagactattcgtatgcaggggggctcgcttgat
cagagctctcaagagtacggacatttgaaagaattagctcgaagattatcacttactttt
ggtttggaccaagttaaaaccagagatgcggttgcagcccttcacaaggaaggtatatta
tttgcattgaagaagagcgatgatcattacaatgagaattatcctcctgaaaacttgagt
ttccttctcatactcgtcgaattttcctccaaactgatgagacaagatcgtaagactgtc
gtgaattacttggacaaacatatcaaaccacatatgttgaagcaacagacagcaggatgg
attccactcgtaacttatagaaactcgttaatacaaggatcagatgacgctgaaattatg
aaacaaccaatgaagggtcgcagaggcagaaagaagaaaaatgtggacggtgacgtggat
gcacctcgaacacctatgacacctgctacacctatgagccctggtgcacctatgacacca
atgaaccctgtgccacagcacacatcaacagtacaacgtgatggtgttcctccaaaacaa
atgcgaatggatgacgctaacgtttcctctatatcataccagcaacatggcaatcaaaga
gatctcaaatcatggcttgatagtggaaaggaaggtcgtagattgaggcagcgtcgagat
aaaaataaagtttcagtgagtgaggaagataccacacccaagagaggaggaaaaacatca
atgttagcttccatattcgattctgaaagtcaggaaagctctgatattggagacgtgagt
gagatcagaaagaaattgagaaaggtacaggttgaggatgtttctgagaggagtgtgaga
gacgaggatgttattgaggaggtttcagtgagtggttcgaatactgatgaaggaaaaaag
actagtacacatccaatcagaaagcggaaaaagacgggaattgaaattattagcgatgaa
attgatgaatttggaaataaaaatggggcattaacgacaaacactttggagagttcagcg
gggagaaaaggtacaagaagaatcaaagaacgaaatgctgataaaattcctaataaagcc
atggattcagatgtttctggtagaattataaagaaaaagaatgaaaatttaaaaccgaga
aaatctgtggtcactgatgcagaatcaatggatgaaaatgacgaatctgacttcaaagat
gctgtggagagtttttcgcctgaaaaaattgccaaaaaagcttctcgcgttctgaaaaaa
ggaaaaaatattgatatggaaagtcctgctcagagacggtcttctagaaaaaatagaaaa
gtgttttcatataatgaagaatcgccagaaattgaaagttcgcctaagaaattattacgt
gaatcgaaacaggaaatacaggaaggtggaaaaagaactagagacgcgagaagtaatcga
ctctctgaatttgagcaagaaaaatcatccccagctcatgtttcctatttcaaaaatatt
caaagtaatccgaatgttacaattgatgacgtgaatgtagaagaggaattgttcggcttt
tgggatgaaattgaaaggaaggagaatgacagaaaagatgaagatacatcattgagttcg
gaggagagttcgtttgagatggaaaatgctgacatcagcaaaaaatttactgacgataca
acaaaaaatgaacccaaagaaacaacgaaaatagctaaaattcgaccagatctgaaaaat
tttgccaaacagagcgttgcgactactccatcaatatcacaaggtagtcagttatccgag
aaagaaaaagcagaatttgaaaagtctgaaaaatttgatcaactgtccggaacgcaaagc
aaaatggaagaagatggcttcttatcagctgacgatacaactttcatctcagaagacgaa
gtattcaaagatgctcgttcgcaaaaaagttcgttaaaatctcccgccaaggttgtaaca
acgcaggatgttttcacatcggcaaatcctttcgcaaaattcaccaagaatttacgagga
accaaactcatcggaaaaattcagagtgaagatgaagaggattttatgagtgaggaatct
ctgagtgacgagaatgctcctttatctccgttgacgcaaagatctggcgcaactgttcgc
acccatatttctgatgtcgatgtagtcgatctacttttggatgaaaacgactcgaaaaat
caggatgaaatgtttggagcttttgcgaatgttgttcgtgacgtccatagtcaaagtagt
caaaatatagatttgcttagcggaggtacaacgcaaaggtcaaagtttactgataatgct
gatttcgatctcgatagtttattcaatagtggggacgaggggagcgagagtgagatggat
aacccgtttgctgccgcgttaaagaaagcgaaatcaagttcgcgacatttgacctctcct
atgtctccgatgtccagtgactgtgatgaggataattttgcaacgatgtttggattcgga
aaaaccaagaaaaagacaaaagtattgaggcaacctaacttgatgggatcaacaatgatg
acatcaccaggtcattctatgacatcaccagtacatcaaggaacccctgattatcatcag
caaatgagacaaggcgggggaggttatcagcaaatacaacaacaacaacaacagtttgta
gttccaggtcaacaaatgatgtaccaacagcaaggttatcaaatgatgcagtccccagga
catatgcagcaacaatctggcatgcctggacaatcgttttacggaagttga
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integrated database retrieval system
