Styela clava (leathery sea squirt): 120335212
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Entry
120335212 CDS
T07291
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120335212
04121 Ubiquitin system [BR:
sclv04121
]
120335212
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120335212
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120335212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
120335212
NCBI-ProteinID:
XP_039258629
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MRRGRRKSSEVWSFFTSPSAPDHENKKTVICCLCKEKLSFHGTTTNLSAHLKAKHPSHLT
SSGYAQATSSTVGPSAQSAAKTKTTQRMISDYSRPLMNQHRAAKITSLITNVITGDMRPI
NLVQGRNFVKLINFLEPGYTVPSRQSFTRNIEDNYCILKVKVKNELAAADNISLTADLWS
SCRMDCYFGVTAHFLVNDTIQSRVVATKQVTESHTAENIALWVDLLLADYEIPPERIVSV
VTDNGANIVAAMRLCSASYNWQHIRCVAHTLQLCVHDCLKNDPIKRAIGAARRLVQHVKQ
STKAMSEIRQLHQSTRTENEPQNFDLIIDCQTRWDSTHDMLERLCSHQWKIRQYLSSLPR
TRAAILELRDGHWIVIQKLIGLLEPLKTSTKYLQGEKYISISSVYPVVKGLCGKYSEIDA
ADDIFEKNFKLSMHTSLQTRFAEVLNFNTETPNLFHKSTLMDPHHKGKYFTHQNKVMVRN
AIIEDMGEARAARPIVECQQSDIASTSTSALSNLDTILAYGKPRDSDSPHSSEDEQGGCT
LEMEWYNKQKCPETDTITWWNANKANAPLLYKCVKKYMITPATSAPAERSFSSAGLTSAG
LRSRLTGEHVEHLNFLHCNMDKM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagaggtcgtagaaaatcgtcggaagtgtggtcatttttcacatcaccatctgct
ccagatcatgaaaataaaaagacagtgatttgctgcttatgtaaagaaaaactcagcttt
catggaacaaccaccaatctgtcagcccacctaaaggcgaaacatccttctcatttgaca
agctcaggatatgcgcaagcaacctccagcactgttggtccatctgctcagtccgctgca
aaaactaaaacgacacagaggatgatttcggactacagcaggccgctgatgaatcagcac
agggctgcaaaaatcaccagtctaataacgaatgtaataactggcgacatgcgaccaata
aatctcgtacaaggacgaaattttgtaaaattaatcaacttcttggaacctggttacact
gttcctagccgtcagtcttttaccaggaatattgaggacaattactgcatcctaaaagtg
aaagtgaagaatgaattggcagcagcagacaatatttcattgactgcagatttatggtcg
agctgcagaatggactgctatttcggagtgacagcccactttttggtaaatgataccata
caaagcagagttgttgcaactaagcaagtcactgaatcgcatactgcagaaaatatcgcc
ctgtgggttgacttgctgcttgcagattacgaaatacctccggagcgaattgtttcagtt
gtcacggacaatggtgcaaatatagttgctgcaatgcgcttatgttctgcatcctacaac
tggcaacacattcgctgtgttgcacacactttgcagctatgcgtgcatgactgcctaaaa
aatgatccaataaaacgtgcgataggtgcagcacgaaggcttgttcaacacgtgaaacag
tccaccaaggcaatgtctgaaataaggcaattgcatcaaagcacaaggactgaaaatgaa
ccacaaaattttgacctcatcatcgactgccaaactagatgggactccacccatgacatg
ttggaaagactatgttctcaccagtggaaaatacggcagtatctcagcagcctgccaaga
acgagagcagcaatactagagttgcgggatggacattggatcgttatacaaaaactcatt
ggcctccttgagccattgaagacatcaacaaaatatctccagggagaaaagtacatttct
atatcatctgtgtatccggttgtaaaaggcttatgtgggaaatacagcgaaatagatgct
gccgatgacatttttgagaagaatttcaaactatccatgcatacgtctctccaaacaaga
tttgccgaagtgctgaattttaataccgaaacaccaaatctttttcacaagtccacactt
atggatccccatcacaagggaaaatattttacccaccaaaataaagttatggtcagaaat
gcgataatagaagacatgggagaagctcgggctgcccggccaattgttgaatgtcaacaa
tccgatatagcctcaacctccacttcagcattatcaaacctagacacaatattggcatat
ggaaaaccaagagacagtgactcacctcatagcagcgaagatgagcagggtggatgtacc
ttagagatggagtggtacaacaaacaaaagtgccccgagaccgataccataacatggtgg
aatgcaaataaagctaatgcgcctctgctatacaagtgtgtgaagaaatacatgattacc
ccagccacatctgcacccgcagagcgatcattttccagtgctggattaacatctgcgggc
ttaagatctcgattgactggcgaacatgttgagcaccttaactttctgcactgcaatatg
gacaaaatgtaa
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