Styela clava (leathery sea squirt): 120335282
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Entry
120335282 CDS
T07291
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv02010
ABC transporters
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120335282
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120335282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120335282
Transporters [BR:
sclv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120335282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
DrrA1-3_C
AAA_15
Motif
Other DBs
NCBI-GeneID:
120335282
NCBI-ProteinID:
XP_039258702
LinkDB
All DBs
Position
Unknown
AA seq
2324 aa
AA seq
DB search
MFFKQLYLLLWKNFTIRRRHLVRTIIEILWPILLFSILIAVRLTQPAERLQECHYPARAL
PSAGVFPWIQTMFCNLDNPCFHVPVASETPGQINEPFNSTTGLTGGLSNVLTTIEEETTI
FTNPDAFVQDITILQTMINEIAREDSEIKATISSLMGDSGATKTALINIGLSNDLADTIL
QSKLNMYQVAQLNSNSDKKSLVCNVTELSAAITIPDTAPLTVNETSAQLCALNSSQQDAM
WNELQSGVDLNKFYEAEGQDLLIQAGTGSGLNTADLAIFVALRLPQLNQELQKVLAAMTD
LMSSLSPDGSGNIFTSAIGYDLASRQGFADFCGHPYPKESFGQAALGGISELVLRLNDNS
SSSDFCTNLITTFESNEELGFAWSVLKPVLFGKIPFSPDTNITRDIMSRANGTFGAIANL
DSLTLQWIEKTGPELYDYLQNDPTVALFRTILDADLGSTGVIDISESQLTFLRAFLSNNE
TSNVNGTVTWKQLYNQLNVGILLVHKLLSCMNLDKFEGYPDEPALEARSLDLLENNSFWA
GIVFQSPTAEDTELPKHIKYKIRQDVDDVMRTDFIKMYFWEPGPMTGPLYISYLVNGFAD
MQDIMEQGITKATADVYGDTAATTITLDYGRVPKLGYYLQQMPYPCYVSDKFLEYLSSMM
SLLMTLAWIYSVCIIIKNIVYEKEERLKEFMKMMGLSNGVHWLAWFINSFYLMTLSSILL
IVVLRAGMILPYSNPFILLIWLLSFCLATIGQCFLISCFFTKANLAAACGGIIYFMLYIP
YNFAITWEDELTYGGKIGLSLFSTVAFGYGAGFVSSYEMTGKGIQFSNWDKSPVPEEQYT
FVTSIIMMLVDAAIYFVLTWYVENVYPGKYGIPRPPYFMFTKSYWCGVSPTPSERDQSAF
LNPAYASNGTQASLEAEPEHLPLGVSIHNLTKIYSNGNKLAVDNLTLNFYEGQITSFLGH
NGAGKTTTMSILCGLFTPTRGTAYIHDHDIRTDMDFIRTSLGFCPQHNVLFRDLTVKEHL
EFYAGLRGQSKSTIREDTKRMLADVNLIHKKNEVVSNLSGGMKRKLSVAVAFTGNSKTVI
LDEPTAGVDPYARRGIWDLLIKYRQGRTIILSTHHMDEADLLGDRIAIISQGSLKCCGSS
LFLKSTYGVGYYLTLVKQKNIAKPINNEPAVLDVSPEDDAESDVASEDEGFASKAASSKS
SIAGEKMSPTEKELDPTLLNKKEAENLIQDIVPSAKLYEENRGEITFILPYSALEEGKYA
GLFQSLDDNNISYGLTDTSLEEIFLSVADHLDETSKPDQSCFSCFTRKRTHSTSSISPEP
SPKNSNDNANRNEPIQLVKVTRKDSLTQSEEPENQSPKSAAVQLEPVQEEDEEDIEELDD
SNGKGSYQITGGKLIGQQFTALLIKRWIHARRNRKGIFAQIILPSAFVLIALCLTLILPP
YDGQPSLELQPWMYGDNQYTFFSNDNPNNTDSSSISDALIDSPGYGTRCVDGYNIMNYGD
YLLDCIPSGVDEWKVDNETKSRSQMVDSKNLTECICSTTDERVLLAECPLGAGGSETPYL
KTNTTDTVYNMTERNVADWLVKTTDRFIERRYGGLSVGEKYNAWFEQSTIDNLVDLLARL
NQTTPDNKELLIFLENMWRTENGQVWFDNNGFHAMPAYLNIMSNGLLRSKLPAGANPSEY
AITVYNHPMNYTKQQVSQAALAQTAIDTAIAIVVVFALSFVPASFVIFLIDERITKAKHL
QFISSVDRLIYWIANFVWDMINYLIPMIIVVIIFVCFQTKAYVSPQNLPCLILLMLLYGW
SVTPMMYPFSFVFDVSSTAYVVLTCVNLFIGINTSIATLILDLLEGDENLQRVNDILQKV
FLIFPHYCMGRGLIDMAVNQATADAYARFGINSFVDPLSWDLAGKNLAAMAITGVVFFGI
NLLIQYRFFIRPTVNEIPEPAFNETMEEDVINEKTRILNHQNPNDILHVENLSKVYEKFP
MRKGLLAVDRMCVGVGGGECFGLLGVNGAGKTTTFKMLTGDEMATAGDAKICGMSINQNI
REVQQNSGYCPQFDALNSHLTGFEHLQLYARLRGVPPEEVDVVANWGVNKLGLKQYAHKP
AGTYSGGNKRKLSAAIAFIGCPPVIFLDEPTAGMDPGARRFLWKRISEVIKVGDYNTDGH
NRCIVLTSHSMEECEALCTRLAIMVNGKFQCIGTPQHLKNKYGKGYTVSVRVGGEESDLN
KVLSFLLDGFPGAVLKERHHNMIVLQLPLEVVKLAEVFKLIEINKTNLHIEDYSVSQTTL
DEVFVSFAKHQTDGEDQPVMIATNSQNSDNNYEMSETMKQDVIA
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaagcaactctatctattgttatggaaaaactttactattcgtcgaagacat
ctcgttcgaactatcattgaaatactatggccaatactactattctcaattttgattgct
gtcagattaactcaaccagcagaaagattacaagaatgtcactatccagcaagagcacta
ccgtcagctggtgtttttccttggatacaaactatgttttgcaatcttgataatccatgc
ttccatgttcctgtagcatcagaaacaccaggacaaattaatgaaccattcaacagcacc
acaggcctcacagggggattaagcaatgttttaacaacaatagaagaggaaacaacaata
ttcactaatcctgatgcttttgtccaggatataacaattttacaaacaatgataaatgaa
attgctagagaggattctgaaatcaaagcaactatatcaagtttaatgggagatagtgga
gcgaccaaaactgcattgataaatattggattgagcaatgatcttgcagatacaatattg
caaagtaaattgaacatgtaccaggtcgctcaattaaacagtaattcggataaaaagtca
ttggtctgtaatgttactgaactttctgctgcaataactatacctgacacagctccattg
actgttaatgagacttcagcacaactctgtgctctcaacagctcacagcaagatgcaatg
tggaatgaactacaaagtggggtcgatttgaacaagttttatgaggctgagggtcaagat
cttctgatacaagcaggtactggcagtggtttaaacacggcagatcttgccattttcgtt
gctttacgtctacctcaattaaatcaagagttacagaaagttcttgcagctatgaccgac
ctaatgtcttcattaagtccagatggcagtggtaatatattcacttcggctattggatat
gatttagcatcaagacaaggatttgcggatttctgtggccatccgtaccccaaagagtca
tttggtcaagcagctttgggaggaatatctgaacttgtgttgagattgaatgataattct
tctagttcagacttctgcactaatttaatcacaacttttgagtcaaatgaagaacttggg
tttgcttggtccgttttaaaacctgttctttttggcaaaattcctttttctcctgatacc
aatattacaagggatatcatgagtcgagccaacggaacatttggtgcaatcgctaacctt
gactctcttactctacaatggatcgaaaaaactggacctgagttatatgattatttacaa
aatgatccaacagttgctctgtttcggaccatcctcgatgcggacttgggttcaactggt
gttattgacatatcagaatctcaactcacgtttttacgagcttttctatcaaacaatgaa
acatcaaatgttaacggcacagtcacatggaaacaactttacaatcaactcaacgtcggc
attctcttagttcataagttgttgagttgtatgaatcttgataaatttgaaggatatcct
gatgaaccagcactggaagccagatcactcgatttattggaaaataattcattttgggca
ggcatagttttccagtctcctactgcggaagacacagaattaccgaaacatattaagtat
aaaattaggcaagatgttgatgatgttatgcgaacagattttattaagatgtacttttgg
gagcctggtcctatgactggaccactatacattagctatttggtaaatgggtttgctgac
atgcaagatattatggaacaaggcattacgaaagctacagcagatgtttatggtgacact
gcagccacaacaataacattagattatggaagagttcccaaacttgggtactatttgcag
caaatgccgtacccttgttatgttagcgataaatttctggagtatttgagcagtatgatg
tcgttgttgatgacgctggcttggatttattccgtttgtatcattattaaaaatattgtt
tatgaaaaagaagaaaggctgaaagagttcatgaagatgatgggtctgagtaatggagtg
cattggcttgcttggtttattaattcattttatctgatgacgctttcaagtattcttctc
attgtcgtgttaagggctggaatgattcttccatacagcaacccattcattctactgatc
tggttgttatcgttctgtcttgcaactataggacaatgttttctgattagttgtttcttt
acaaaagcaaacttggctgcagcgtgtggaggaatcatatattttatgctttatattccg
tataattttgctatcacttgggaagatgaactgacttatggaggaaaaattggactttca
cttttttctactgttgctttcggatatggagctggttttgtgtcgagttatgaaatgact
ggaaaaggaattcaatttagtaattgggataaaagcccagttcctgaagaacaatatacc
ttcgttacatctatcattatgatgcttgttgatgctgcgatatattttgtattaacatgg
tatgttgaaaatgtttaccctgggaaatatggaattccgagacctccatattttatgttc
acaaagtcatattggtgtggagtatctcccactccatctgagagagatcagagtgctttt
ctcaatccggcctacgcatcaaatggtactcaagcatctttggaagcagaaccagagcac
cttccactcggtgtctcaatccacaatttaacaaaaatatatagcaatggaaacaaactt
gctgttgacaacttgacattgaatttttatgaaggacaaattacatcatttcttggacac
aacggagctggaaagacaacgactatgtcaatattgtgtggtttattcactccaacacgt
ggaactgcttacattcacgaccatgatatcagaactgacatggatttcattcgaacaagt
ttaggattctgtccgcagcataacgttctctttagagatttaacagtgaaagaacatctt
gagttttacgctggactccgtgggcaatcaaaatctacaattcgtgaagacacaaaacgc
atgttagctgacgtcaacttgattcataaaaaaaatgaagttgtctcaaatttatctggt
ggaatgaaaagaaaattatcggtcgccgttgcattcacaggaaactcaaaaacagtcata
ttggatgaacctactgctggtgttgatccatatgcaagaagaggaatttgggatttgttg
ataaaatacagacaaggaagaacaatcattttatctactcatcatatggatgaagctgat
ttattgggagatagaatagccattatttcccaagggagtctcaagtgttgtggatcatct
ttgtttcttaaaagtacatacggagttggatattatcttacactcgtcaaacagaagaat
attgctaagccaattaataatgaaccagctgtattggacgtttctccagaagatgatgca
gaatctgatgttgcttcagaagatgaaggttttgcaagcaaggccgcaagttcaaaatct
tctattgcaggagagaaaatgtcacccacagaaaaagaattagacccaacattgttgaat
aagaaagaggcagaaaatttgattcaggatatcgtaccaagtgccaaattatatgaagag
aacagaggagagataacatttattttgccgtacagtgctcttgaagagggaaagtatgct
ggattgtttcaatctctcgatgacaacaatataagttatgggttaactgacacaagtttg
gaagaaatctttttatctgttgctgatcatttggatgaaacatcaaagccagatcaatca
tgtttttcatgtttcacaagaaagcgaacacacagtacgtcctcaatctctcctgaacca
agtccaaagaattctaacgataacgcaaatagaaatgaacccattcaacttgttaaagtt
acaagaaaagacagtttgacgcaaagtgaagaaccagaaaatcaatcaccgaaatccgct
gcagttcaacttgagcctgtccaagaggaagatgaagaagatattgaagaacttgacgat
tctaatggaaaaggatcctatcaaattactggaggaaaactaattggacaacaatttact
gcattgttgattaaaagatggattcatgcaaggcgaaatcggaaaggaatttttgctcaa
attatcttaccatctgcatttgtactcatcgctctatgtctcactctgattttacctcct
tatgatggtcaaccctccctcgaattacaaccatggatgtatggggacaatcagtacact
ttcttcagcaatgataatccaaacaacacagactcgtcatccatatctgatgcattgatt
gattctcctggttacggcaccagatgtgttgatggatataatataatgaattatggagat
tatttactcgactgcataccatcaggagttgatgaatggaaagttgacaatgaaacaaaa
tcacgaagccaaatggtggattctaagaacttaacagaatgtatttgttcaactactgat
gaaagagttctacttgcggagtgcccacttggtgctggaggatccgaaactccatatttg
aaaacaaacacaacagacactgtgtacaatatgactgaaagaaatgttgctgattggtta
gtaaagacaactgacagatttattgaaagaaggtatggtggactgtcagtgggagagaaa
tacaatgcttggtttgagcaaagtactatcgacaatcttgtagatttactcgctaggcta
aatcagacaacaccagataataaagagcttctaatttttttggaaaatatgtggcgaaca
gagaatggacaggtttggtttgataacaatggatttcatgctatgcctgcttatctgaac
ataatgagcaatggactactaagatctaaacttcctgctggagcaaacccttctgaatat
gcaatcaccgtttataatcatcctatgaattatacaaagcaacaagtcagccaggctgca
ttggcacaaacagcgattgatacggcaattgcaattgtagttgtgtttgcattgtcattt
gtacctgctagttttgtcatcttcctaattgacgagcgaattacgaaagcaaaacatctg
cagtttataagtagtgttgacagactcatttactggattgctaactttgtttgggacatg
atcaactacttgattccaatgatcattgttgtcatcatatttgtatgttttcaaacaaaa
gcttacgtctctcctcagaacttaccgtgtcttatattgttgatgctgttatatggatgg
tctgtaactccaatgatgtatccattcagctttgtatttgatgtttcaagtacagcatac
gttgttctaacttgcgttaatttgtttattggaatcaacacgagcattgctacattgatt
ctcgatctccttgaaggtgatgagaatctgcaaagagtgaatgacatcctacagaaagtt
ttcttgatatttccacattattgcatgggacgtggactcattgatatggcagtgaatcaa
gccactgctgatgcttatgccagatttggtatcaattcatttgttgatccactcagttgg
gatcttgctggaaaaaatcttgctgctatggctattactggtgtggttttctttggaatt
aacttactaatacaatatagattctttattcgtcctactgttaatgaaatccctgaacca
gcgtttaatgagacaatggaagaagatgtcatcaatgaaaaaactcgaatcttaaatcat
caaaatcctaatgacattttgcatgtcgaaaatctatcgaaagtttatgagaaatttccc
atgagaaagggattactcgctgttgatagaatgtgtgttggagtgggcgggggagagtgt
tttggattgcttggagtgaatggtgccggtaaaactacaactttcaaaatgcttactgga
gatgagatggcaacagccggtgatgcaaaaatatgtggaatgagtattaaccaaaatatt
cgagaagttcaacaaaactctggatattgtcctcagtttgatgcactgaattcacacctg
actggtttcgagcatttgcaactgtatgcacgtctacggggtgtcccacctgaagaagtt
gatgtcgtggctaactggggagtcaacaaactcggattgaaacaatatgctcataaaccc
gctggtacatacagtggaggaaataaaagaaaattatcggctgctatcgcgttcatcgga
tgtcctcccgttattttcttggatgaaccaactgctggaatggatccaggtgccaggaga
tttttatggaaaagaatttctgaagttattaaagttggagattacaatactgatggccat
aatagatgtattgtacttacgtcgcatagtatggaagaatgtgaggcgttatgtactcgt
cttgctatcatggtcaatggaaaatttcaatgtataggaactccacaacatcttaaaaat
aaatatgggaaaggatataccgtgtcagtacgtgttggtggtgaagaatctgatttaaac
aaagttttaagttttcttcttgatggtttcccaggagctgttttgaaggaaagacatcat
aatatgattgtgttacaacttccacttgaagtagtcaaacttgctgaagtcttcaaacta
attgaaataaataaaacaaatcttcatattgaagattattctgtcagtcaaacaacactg
gacgaggtatttgttagttttgcaaaacatcagactgatggtgaagaccagcctgtgatg
atagctacaaattcacaaaacagcgacaacaactatgaaatgagtgaaacaatgaaacaa
gatgtgattgcataa
DBGET
integrated database retrieval system
