Styela clava (leathery sea squirt): 120335404
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Entry
120335404 CDS
T07291
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120335404
04121 Ubiquitin system [BR:
sclv04121
]
120335404
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120335404
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120335404
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
bZIP_C
SKA2
DUF659
Motif
Other DBs
NCBI-GeneID:
120335404
NCBI-ProteinID:
XP_039258835
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MTLVVLVLTLSVQAVSDNGSNMKAAKDIFHEKFGWASVACAAHTLQLCLNKGLGINGIEK
PLAAARRLVQHFKRSELATSALGKKCEEMKLTSKRLIMDVSTRWNSTYNMLVRLQELQWP
ILAILGNKNITNATKASSLTIKPGDWEIFKQLIPVLEPFAEATDLLGGEKYVSISIKNPY
IKRLKKHLSREKDDELLVIQQFRQKVKGEMEERFPIDLNDISSKAMALDPRYKLRGLRTV
ESLQVTCYFFLNKIFILPTKLPYMTNNIACYFGWNEVKLNFRVNSFLFEQTVVEKAEPSS
SSVQQSTSIISLAFESSESDDSADTEVPVVANEVNKFFSSKVLSECSNPLTWWKEQNANY
PNLSKLVGKYMCVTATSTPSERLFSAAGNTATELRSSLTGSHVEVLVFLKCNSDI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactttggtcgtgttagtcctcacgctgtctgtgcaagcagtaagcgataatggatct
aatatgaaggcagccaaagatatttttcatgaaaaatttggttgggctagtgttgcttgt
gcagcgcacactctccaactttgtttaaacaaaggattgggaataaacggcatagaaaaa
cctcttgcagcagctcgacgactagtgcaacattttaagagaagtgaattggcgaccagt
gcactggggaaaaagtgtgaggaaatgaagcttacctccaaaagactcataatggatgta
tccacaaggtggaacagtacttacaacatgcttgtaaggttgcaggaattgcaatggcca
attttggctatacttggaaataaaaatatcacaaatgccaccaaagcctcctctcttaca
atcaagcctggggactgggagattttcaagcagttgattccagtacttgagccttttgca
gaggctactgatcttttaggaggcgaaaaatatgtctcgatatcgataaagaatccatac
atcaagagattgaaaaaacatctgtcacgcgagaaagatgatgaacttttggtaatccag
cagttcagacaaaaagtaaaaggcgaaatggaggagcgatttccaattgatcttaatgat
atcagctcgaaggcaatggctctggatcccagatataaactgcggggacttcgtactgtg
gagtcacttcaggtaacttgttatttcttcctgaataagatttttatcttgccaacaaaa
ttgccctacatgacaaacaacatagcatgttattttggttggaatgaggtcaaattgaat
tttcgtgtaaattcattcttatttgaacaaacagttgttgaaaaagctgaaccttcatct
tcttcagttcagcaatcgacatctatcataagccttgccttcgaatcatcagagtccgat
gacagtgcagatactgaggtcccagtggttgccaatgaagtgaacaaattttttagttcc
aaagtactttctgaatgttcaaaccccctcacttggtggaaagagcaaaacgctaattat
ccaaacttgagcaagcttgttggcaaatatatgtgtgtaacagcaacatcaaccccaagt
gagcgattattttctgcagctggaaacactgccactgagctcagatcaagcctcaccgga
tcacatgtggaagttcttgtatttttaaaatgcaattctgacatatga
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