Styela clava (leathery sea squirt): 120335449 Help Entry 120335449         CDS       T07291                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism sclv  Styela clava (leathery sea squirt) Brite KEGG Orthology (KO) [BR:sclv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sclv03000]     120335449 Transcription factors [BR:sclv03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     120335449 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HMG_box HMG_box_2 DUF4819 Motif Other DBs NCBI-GeneID:  120335449 NCBI-ProteinID:  XP_039258888 LinkDB All DBs Position Unknown AA seq 2742 aa AA seqDB search MISSFSSQTAVHMMSRMPGYEGMPQNESGMPGTYSISDQHPPNQQSSAGAVHLSRPNTHL IVQTGNTRQAYNLGNTGRSSLPHLSTTQHLAGHMTRNLVNQIPVSSIEAKHIQDGLALTD HVSSASPQKINGPNQAGTVTYATPQGTILPPPMCRLPGPRPPQQNNHNTIRRNQSHPEIL EGRQVTPPAQTSRSRPSSSLGVTGSAEKRRKKRISDTLSNPTISTASRWTHLERCRGLAV LAKRGDTYKQAKFVKVRLDGQVGVLFDGDKDKAINYFMDPEKTDHVIADFPLDKEHNLLT RSKVICKVHPESSVYKTAYVQNYNEETGIFTVRMEDDVNDLFVPRERVRQMIAPWLFPNL PSPPPRHEGDSDCDSDFRPTNTDDEATETASESDSENNNNNSSMNADISAESRRSALVRS RRNPSGEVRLHMTGSSMDHSFDGNPYLDRSRHQSGTSDISIPSPEMIRGGRSSSARAMLS SPRGSSLSRPNSALSERSISRSSSRSVTPVTAGQQKYKKNEIVTMSTGVRKKFNGKQWRK LCCRGDCMKESQKRGLCSRHQSMQSRTVPSTPNDEILVGHQSRTADPLPGRAASAVLPSE SPIRHRYVHRGSSSSIQGLYSPTKVQVKPQYHLSPPAASPAPISSKFRKRYVTVTDEHEA ARSLVKLACSPIDSKVHAGPSPRKSNEFVTTPSPLTVRNGSQSNLFAPIPQSLTSTPFRD SLAVPAGGQGPIGTVLLTNTTPTKQWAHGKRHEAVEMVSPQLPIRHGSHIAPSFGQSLFS CKSPSKSRHGVLLQPSLQHGRYSIALTHATNKPDGTPINDGADSGVESIGHTPTPTTPGI NSRPHSPNVFVSPSSSGIQPGVAQAVAGHYSHHYSRNEGYVISPPTIISNPLRNQRFFPH DQGQDGGTERQSHSGADASVIKQPVGKYIRAPNSSRLNYMPANNQDHRSGIIAPTPQHAA TSSSGRVPQHPPLPIGASLPSSVKYGREGRSAFRGADGRKSEDRTRQEQRPDEAGGILVP RTRSTSSSTTISAKSNSRGSTPAHDPDSNASYVDQNQITVQQQHQQQHVPVLTIPEQRHT RIVHNQPTNIPSVSAHSSAMPHSRLQVQQQAVLQYPATHLVQQGNAMLRTVTPGLYPYVG SGYHQQILTSNTAPVAVVTSTVTSVSCSSAVVSIGANPVVPEGLVPQILYPGISALGGLP PGATYIVVHPNQFASMHQTASVLQQQTNQSSLPTLPPRQMETKPSVQQQPSQHQPTSISR QSHDISATVSNPHRSLESSAYPVPDSLRQQHTLQSTTCRTSEETLPQTEVPHAISEQRPV YQWHQLLPYLGHFPSAETTSPPPMNGVANDGQTQMPQAETDGTTNVQSVERIQQSNHTHH DTSMNRVVANSARNRTDSHEAYQTFEYVVQNPRHSTTEFTKHAIATSSARSNSGECEAAV RRSYSSDIDHRQTKDNSLHPHDEDDVFLPTVNPHASQQYFSMSSPSSNSTEQIQVARPSS ESEHLPHVSPPKKRSLSTGVANKDDKTSKKHKGTTDKQIPTSCASLLGEDHIRRPMNAFM IFSKRHRALVHQYHPNQDNRTVSKILGEWWYALQPSEKREYHDLAFQVKEAHFKAHPDFK WCNKDRRKSGSTSRSRRTSESSVGSADSSLSRPHNPSTSSHHPGVSGSGVTSGSATPFSP MSPNASGHFQNQMLSPGTGIMPSVPHVAPLAGVAGQRQSIVLSEVTTSSVVASLQNPNQS SQQPTTTTLPHQFLKPAAESISSRSRTPSLEIDLKCREKVVTDSDIDISDDEPDGRRKHQ QHYPILHNTSSVSRAQTSSSTDTKCKRPKPIKPMAGSSGSASPLIGSGPTAGKSSSPFQP TGKVFKTLSPRPGHAPLPNTTGNMKSVASAQMSNVQALSSSELPGVGQSISLSQGHVQFA VAQQSRSYQPTMIIGPGGVQYLAYSAPQAQNSTSSSSNVPGAGGNIVIVPLQNGQISSLN HPVPPQKLPTTFPNQIQVTTRNTSIVSFSENARISSFMSHITTTAAAVSITMASSTINTA ISQVSIKTTTVPPSYVTVMSSVANATSALNAYATLPGTRPTLPPHATHNYDTRTPMSFPI GVPPSVPQMFPPVMTTEIQRARLSHPIASASAQFGNHPVIPSSHSANIERRKSLGFPSSG EDKVSLPSTGTRAPVIGYSPAMASQPIHRRGHSIPTTMPLLTSATHSIYPVAIPPTVSHY RSTSVPSQHEGQVQRPEPAPMIKPTSAMYFVTVPSRLAPRLTDGPSPTLTAQSRIMPGHD NFAMSVPHNAAGPTIQDSNVSHGSNVMTIPHNLAINGSLAGALPFHPAHPQSFVIATNVS TTQPSATLLDRHRINVAAPLKVRASVANVPIVTSESYAGGTSHFVVRDAFSSVNTTNSLQ NVMSSIEKPTADSTEMKNVVEPNRSVPYSAVRTSRLSQDSNASSSSTTSSVLKLDPVPSK FLSRRKKSLLYSSSEGEYQEENERLEKEFEISEEDAQANTTDVIEAPFYNKISSVKILQK KADMKDQDRDRDRILCQVNFKEQFSQLPQFKPELVPTPGTPKELPTTPDVLLQSYRKKRK LSTESPNTPTSPHLKRRPRKKIHNIGCETPHSANSLPSSATNTPASTSGGDIFTFEHGES ILRKDDSDTSEPPDSRGSSLRKILDLRRSLVMKLFEEHGFFPKNQITAEFQANHSDVFPT KNCLQLKIREVRQKIYQCQQDEEPATKQTSSTTSNLVQSKIS NT seq 8229 nt NT seq  +upstreamnt  +downstreamnt atgatatcatcgttctcaagtcaaactgcagtgcacatgatgtcccgcatgcctggctat gaaggtatgccacaaaatgaaagtggcatgcctggcacttattcgatatccgatcaacat ccaccaaaccaacaatcttcagccggggctgtccatctctctagacccaacactcatctc atagttcaaactgggaatacacgtcaagcttacaatctaggcaacacaggtcgctcaagc cttcctcacctatccacaactcaacatcttgctggtcacatgacaagaaatcttgtaaat caaatacctgtatctagtattgaagcaaagcatatacaagatgggcttgctttaactgat catgtatcttcggcatcaccacagaagattaatggaccaaatcaagcaggtacagtgaca tatgcaactccccaaggtactatacttcctccaccaatgtgccgtctacctggacccaga ccaccacagcaaaacaatcacaacacaattcggcgaaaccaatcacatccagaaatattg gaaggaagacaagtcactccacctgctcagaccagtcgctcacgaccgtcctcttctctt ggcgttaccggctcggctgagaaaaggagaaaaaagagaatttcagacactttatctaat ccaactatttccacagcttctcgttggactcacttggaaaggtgtcgtggactggcggtt ttggctaaacgaggggacacttataaacaagcaaagtttgttaaagtcaggttggatggt caggttggagtattgtttgatggtgacaaagataaagcaatcaattattttatggatcct gagaaaactgatcacgttattgctgattttccattggataaagaacacaatttacttacc agaagtaaagtaatttgcaaagttcatcctgaatcttcggtttataaaacagcgtatgtg caaaactataatgaagaaactggaatcttcactgtacgtatggaagatgacgtcaatgat ttattcgtcccaagagaacgagtccgtcagatgattgcaccatggctttttcctaatcta ccttctccacctccaagacacgaaggtgattcagattgtgattctgattttcgaccaaca aacacagacgatgaagcaacagagactgcttcggaatccgacagcgaaaacaacaacaat aattcctcgatgaatgctgatatatcagcagaaagtagacgaagtgctttagtaagatct cgtagaaatccaagcggtgaagtcaggcttcatatgaccggatcttccatggaccacagt tttgatggaaatccatatcttgatcgttcacgtcatcaaagtggaacaagtgacatcagc atacctagtcctgagatgatcagaggaggtcgaagttcatcagctagagcgatgctctcc tccccaagaggaagttctttgtcgcgaccaaattctgctctcagtgagcgaagtatcagt cgttcgtcatctcgttctgttactccagtaactgctggtcaacaaaaatataagaaaaat gaaattgtcaccatgtcaactggtgtaaggaagaaattcaatggtaaacaatggagaaaa ttatgctgtcgaggagattgcatgaaggaatcacaaaaacggggactctgttcaagacat caatccatgcaatccagaactgttccatcgactcctaatgatgaaatattggttggacat caaagtagaactgctgaccctcttcctggtagagcagcatctgccgttttaccatctgag tcacctataagacatcgctatgtccacagaggatctagttcttctatacagggattgtat tctcctactaaggttcaggttaagccacaataccacttatcaccacctgccgcatctcct gctcctatatcttcaaaatttcgtaaacgatacgtcacagtgactgatgagcacgaagct gccagaagtctcgttaaactagcttgcagccctattgattcgaaagtacatgctggaccg agccctcgaaaatccaatgaatttgtgacgacgccaagcccattgactgttcgtaatggt agccagtcgaatctatttgcacccataccccaatctctgacaagtacacctttcagagac agcttggcagtacctgcgggaggccagggtcccattggcactgttcttctcaccaacaca acgcctaccaagcaatgggcacatggaaaacggcatgaagctgtagaaatggtatcgcca caactgccgataagacatggtagtcatatcgcaccttcgtttggacaaagtttgttcagt tgtaaatctccaagcaaatcaagacatggggttttgctgcaacctagtttgcaacatgga aggtactcaattgctttaacccatgcaactaacaaacctgatggcactcctataaatgat ggagctgactcaggagtggaaagtataggtcacactccgactcctacaacccctggcatt aactcaagacctcacagtcctaatgtttttgtcagtccatcatccagtggaatacaacct ggtgtagctcaagctgttgctggccattacagtcaccattattcacggaacgagggttat gtgatttcacctccaacgataatatctaatcctttgagaaatcaaaggttttttcctcat gaccaaggtcaggatggtggaacagaaagacaatctcattccggggcagatgcatctgtg ataaagcaacccgtaggaaaatacattcgggcgcctaattcttcaaggcttaactacatg ccagcgaataatcaagaccacagaagtggtataatagcacctacccctcagcatgcggcc acatcttccagtggcagggtcccacagcatcctcctttacccatcggggcatcactacca tcttctgtcaaatacggtagagaaggtcgctccgcttttcgaggtgcagatggaaggaaa agtgaggaccgaactcgacaagaacaaagacctgatgaggccggtggtattttagttcca agaacacgaagcacttcatcgtcaaccaccatatctgctaaatcaaattcaagaggcagc acgcctgctcatgatccagactctaatgcaagctatgttgaccaaaatcaaatcactgtg caacaacaacatcaacaacaacatgttcctgtactaaccattcctgaacaaagacacact cgaattgtacacaatcaaccaacaaatataccaagtgtcagcgctcattctagtgccatg ccacattcaaggttgcaagtgcaacaacaagcagtgcttcagtaccctgctacacatttg gttcagcaaggtaatgctatgcttcgaaccgttactcctggattatatccttacgttggt tctggctatcaccaacaaattttaacttcaaacacagctcctgtagcagttgtaacatcc acagtaacttctgtaagctgctcatcagcagtggtctccatcggtgccaatcctgtcgta cctgaagggttagtgccacagattctgtaccctggtatttcagctcttggtggtctccca cctggagcgacgtatatcgttgttcaccccaatcagtttgcaagtatgcatcagacagca tctgttctacaacaacaaactaaccaatcttctctaccaacactgcctcctcgacagatg gaaacaaaaccttctgttcagcagcaaccatctcagcatcaaccaacgtcaatttctcgt cagtctcacgatatttcagcaacggtttctaatcctcatcgatcactggaatcttctgca tatcctgtacctgactcattgagacaacaacatactttgcaaagtacaacttgccgaact tcagaggaaacattgccacaaacagaggtacctcatgctatctccgagcagaggcctgtt taccaatggcaccaattgttgccatatttgggccattttccttcagctgagacgacatct cctccaccaatgaacggagtagcaaatgacggacagacacaaatgcctcaagcagaaacc gatggtacaacgaatgttcaaagcgtagaaagaatacaacagtcgaaccacacgcatcat gatacttcaatgaaccgtgtcgtggcaaattctgcaaggaacaggactgactctcatgaa gcatatcaaacttttgaatatgtagtacaaaatccaagacatagtacaacagaatttaca aaacacgccatcgcaacctcaagcgctcgttctaattccggtgaatgtgaagctgccgtc agacgctcttattcatcggatattgatcatcgtcaaacaaaagataactcgttacaccca catgatgaagacgatgtgtttttacctactgtgaatccccatgcatcccaacaatacttt tcaatgtcgtctccttcgagtaattccacggaacaaatccaagttgcaagaccttcaagt gagagtgaacatttgcctcacgtttctccacctaagaaacgatcattgtcaacaggagtg gcaaataaagatgataaaacatcaaaaaagcacaaaggcactactgacaaacagataccc acttcgtgtgccagtttacttggcgaggatcacatcaggagaccaatgaatgctttcatg atattcagcaaacgtcatcgtgcacttgttcatcaatatcatcccaatcaagacaacaga actgttagtaaaatacttggtgaatggtggtacgctctacaaccatcagaaaagagagaa tatcatgatttagcttttcaggtaaaagaagcacatttcaaagcacaccctgatttcaaa tggtgtaacaaagatcgcagaaaatcaggaagcacatcacgatctcgtcggacatcagaa tcatcagtgggctctgcagattcgagtttgtctcgaccacataatccttccacatcgtct caccaccctggcgtttctggttctggtgttacgtcaggtagtgccacccctttttctcct atgtcaccaaatgcttctgggcactttcaaaatcaaatgttgtcacctggcacaggaatt atgccgtctgttccccatgttgcaccactagcgggggtagcaggtcagcgtcaaagtata gtcctgtcagaagtcactacctcatctgttgttgcgagtttgcagaatcccaatcaaagc agtcagcaaccaaccacgacgactcttcctcatcaattcttaaaaccggcagcggaatcg ataagcagcagatccagaactccatctttggaaatcgacctcaaatgtagagaaaaggtt gttactgattctgacattgatatttctgatgatgaaccggatggtagaagaaagcatcaa caacattatcctattttgcacaatacttcatctgtatctcgagctcaaacttcctcatcc accgatacaaagtgtaagaggcccaaacccatcaaaccaatggcaggttccagtggttct gccagtccacttattggatcaggtcctactgcaggaaaaagctcaagtccttttcaaccc accggtaaagttttcaagacgctatcacctaggcctggacatgctcctcttccgaatacc actggcaatatgaaaagtgttgcatctgcccagatgtccaatgtacaggctttgagcagt tcagaacttcctggagtcggtcagtctatcagtctctctcaaggacatgtccaatttgcc gtagcacaacagagtcgatcataccagcctaccatgattataggaccgggcggtgtacaa tatttggcttactctgctccgcaagcacaaaactctacatcctcaagttccaatgtccct ggcgctggcggaaatatagtcattgtaccgttacaaaacggccagatttctagtttaaac catccggttcctccacagaaattgccgactacatttccaaatcaaattcaagtgacaacc agaaatacaagtatcgtaagcttttccgaaaatgccagaatttcaagcttcatgtcccat ataaccacaacagctgcagcagtcagtattactatggcttcatctacaatcaacactgct atttcacaggtatcaataaagactacgactgtcccgccaagttacgtgacagtaatgtcc tccgttgcaaacgccacatctgcactgaatgcctatgccacattgccagggaccaggccg acactgccaccacacgcgactcataattatgatacaagaacacctatgtcatttccaatt ggagtccctccatccgtgccacaaatgtttcctcctgttatgacaactgaaattcaaagg gctcgactttcacatccaattgcttcagcatcggcacagtttgggaatcacccagttata ccaagttctcattcagctaatattgaaagaagaaaaagtcttgggtttccttcatctggt gaggataaggtatctttgccttctactggtaccagagcaccagttatcggatacagtcct gctatggcgagtcaacctatacatcgacgcggacattctatacctacaacaatgccatta ttaacatcggcaacacactctatttaccccgttgccataccaccaactgtgtcacattat cgtagcacttctgtccccagccaacacgaaggacaagtacagagaccagagcctgctcca atgatcaaacctacttctgccatgtattttgtaactgtgccctctcgccttgcaccgaga cttacagacggcccgtcaccaactttgacggcgcaaagtcgtattatgccaggacacgat aattttgctatgtcagttcctcataatgctgcaggaccaacaattcaagattcaaatgtc tcgcatggaagtaatgtcatgacgattcctcacaacttagctattaatggtagcttggct ggagcgttgccgtttcatcctgcccatccacagtcatttgtcattgcaactaatgtctca actacacaaccaagtgctactttgctggacagacataggatcaatgtggctgcaccattg aaagttcgtgcctctgtagccaatgtacctattgtaacgtccgagtcatatgctggagga acaagtcattttgttgtcagagatgccttctcttcggtgaacaccacaaattcattgcaa aatgtcatgtcatcgattgaaaaaccaacagctgattcaacagagatgaaaaatgtggta gaaccgaatcgatctgtgccttattctgcggtgagaactagcagactcagtcaggattct aatgcttcttcatcgagtacaacatcatcagtgttaaaattagatcctgtaccatctaaa tttttatcgagaagaaagaaaagtctgctttattcttcatccgaaggagaataccaagaa gaaaatgaaagattggaaaaagagtttgaaatatctgaagaagatgctcaggcaaataca actgacgtcattgaggcaccattttacaacaaaatatcttctgtcaaaatattacaaaag aaggccgacatgaaagatcaggatagagatagagacaggatactatgtcaagtcaatttt aaagaacaattcagtcaacttccgcaatttaaacctgagttagtaccaacacctggaaca ccgaaagaacttccaacaactcctgatgttttgttgcaaagttatagaaagaagagaaag ctttctacagaatctccaaacactccaacttctcctcatttaaaacgaagaccaagaaaa aaaatccacaatattggttgtgaaacacctcactcagctaattcactaccaagttctgca acaaatactcctgcgtcaacttctggaggcgatatatttacattcgaacatggagagtca atcctaagaaaagatgattctgatacatctgaacctcctgattcaagaggaagttcattg aggaagattcttgatctcagaagatctcttgtgatgaaattattcgaagagcatggattt tttcctaaaaatcaaattacggcagaatttcaagccaatcactctgatgtgtttccaacc aaaaattgtcttcagctgaagataagagaggttcgtcagaaaatatatcaatgtcaacaa gatgaagaaccagctacaaagcaaacttcttctacgacttcgaatctagtacaatccaaa atatcttaa

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