Styela clava (leathery sea squirt): 120335583
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Entry
120335583 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120335583
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120335583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Tle3
Motif
Other DBs
NCBI-GeneID:
120335583
NCBI-ProteinID:
XP_039259053
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MAPVPTIQNQKGKQDGRSGRGGTIERTGLVTRVKYCNXLPDIPFDPKFICYPFEANRFVE
YKPTTLEKLHKIDLHTDHDLGVMIDLINPDTYKVDLKDTLDPADEALLEEDLPAPQDSKR
SKQHSINVSWLRRSEYISQEFNRYGANNTNVETRLGAGIKELFKDDDLYKDRDSQIAAIQ
KTFEDAKTDIKKHYSKPNVYPVDVLPIYPDFKMWQHPSAQVIFDTDPAVKGSSPQQQIQE
MSQAMIRGMVDEEGDQFVAYFLPTSGTLKKREQDNEEGMDYNPEELYDYKLAREYNWNVK
NKASKGYEENYYFVMREDGVXYNELETRVRLSKRRAKGGGGLQSATNAVLAVHHRELNDQ
ELAAQEMRRMQLEPLEADEDFDEKQDDELEEEDGDEKLEGESSAEEGEKESQEEGGEEGE
EEEEAAGSSESESEDKKETTTQDEEEEDASEHSEEEVEEKKAESSSASSSDENEQGEEEG
ENRQAQEIFGSESDSSGSDSD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgcctactattcagaatcagaagggaaagcaggatggaagaagtgggcgt
ggtggaacaatagaaagaactggactggttacaagagttaaatattgtaacnaattacca
gatattccttttgatcccaaattcatatgctacccgtttgaagcaaatagattcgttgaa
tacaaaccaacaacactagaaaaacttcataaaattgatcttcatactgatcatgacttg
ggtgtgatgattgatttaataaaccccgatacatataaagttgatttgaaagatactctt
gatccagctgatgaggctttgctggaagaagatcttccggctccacaggattcaaaacgt
tctaaacaacacagtatcaatgtttcttggttaagaagaagtgagtacatttcacaagag
tttaatcgatacggagccaataacactaatgtggaaacgcgtctaggggccggtataaag
gaactcttcaaagacgatgatttgtataaagacagggatagtcaaattgcggctattcag
aaaacgtttgaagatgcaaaaactgatatcaaaaagcattatagtaagccgaatgtatat
cctgttgacgttcttcctatttatccagatttcaaaatgtggcaacatcccagtgcacaa
gttatatttgatactgatcctgctgtaaaaggtagttctccgcagcagcaaatccaagaa
atgtcacaggctatgatcagaggtatggtagatgaagaaggagatcaatttgtcgcttat
ttcttgccaacgagtggtactctgaaaaaacgagaacaagacaatgaagaaggcatggat
tacaatccagaagagctctacgattataaacttgcaagggaatataactggaacgttaaa
aataaagcatcaaaaggttacgaagaaaactattattttgtaatgagagaagatggtgtg
ntttacaatgaattagaaacgagagtgcgacttagtaaacgaagagcaaagggaggaggt
ggactgcaatctgctacgaatgcagtccttgctgtccaccatcgtgaactaaacgaccaa
gaacttgcagctcaagaaatgcgaaggatgcagttggaaccattagaagctgatgaagat
tttgatgagaaacaggatgatgaactggaagaagaagatggagatgaaaaattagaagga
gaatcttcagctgaagagggagagaaagaatctcaagaggaaggtggagaagagggtgaa
gaagaagaagaagcagcaggatcctcggaatcagaaagtgaagataaaaaagaaaccact
acacaagatgaagaggaagaagatgcaagtgagcacagtgaagaggaagttgaagaaaag
aaggcagaatcatcatcagcttcttcaagtgatgaaaatgaacaaggagaagaggaagga
gagaatcgtcaagctcaagaaatatttggaagtgaaagtgactcatctggatctgattca
gactaa
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