Styela clava (leathery sea squirt): 120335591
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Entry
120335591 CDS
T07291
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like
KO
K17908
autophagy-related protein 18
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04136
Autophagy - other
sclv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120335591
04136 Autophagy - other
120335591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120335591
03029 Mitochondrial biogenesis [BR:
sclv03029
]
120335591
Membrane trafficking [BR:
sclv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120335591
Mitochondrial biogenesis [BR:
sclv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120335591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
DUF7165
EIF3I
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_EML
TMEM106
Motif
Other DBs
NCBI-GeneID:
120335591
NCBI-ProteinID:
XP_039259061
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MANIQADSVASDLLFANFNQDSTSLAVGSRHGYRLFSLSSVDRLEQIHDNEGTIRDVCLV
ERLFSSSLVAIVSLNSPRKLKVCHFKKGTEICNYSYSNTILAVKLNRLRLVVVLEESLYV
HNIRDMKVLHTIRDTPSNLKGICALSASSDNSLLAYPGSPHTGEVQIFDVTNLKAVTMIH
AHNNPLAAMAFNKEASRLATASDKGTVIRVFSVPDGKKLFEFRRGVKRCVSINSLSFSSN
AMFLTASSNTETVHIFKLDLSSAASSPQSVAPTRNGYQSSDVANNNKHDSSWMDYFNKVL
TTSSNYLPIQVTDILNQDRAFATVKLPTACRKNICTLAVIQKLLRVIVASTDGYLYIYNL
DTEEGGECTLIRQHRLNIESGFITRQSPTPISPSSYAEATRGQQTVPKIKDRSGSTGSSA
SSSSDSTFSNVSKSDSSPGRVRYTHSPKGRLKGMIDEHELAEDLPLDDESEFPPMTMYCE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctaatattcaagcagacagtgtagcgagtgatttgctgtttgctaacttcaaccag
gattcaacatcactcgctgttggaagtcgtcatggctacagacttttttctttgagctca
gttgacaggctcgagcagatccatgacaacgaagggactattcgtgatgtctgcttggtg
gaaagactcttctcaagcagtcttgttgctattgttagtctgaattcaccaaggaaactg
aaagtatgccatttcaaaaagggaactgaaatatgtaattacagctactccaatactatt
ctcgctgtcaagcttaacaggcttcgactcgttgttgttttggaagagagcttgtacgtg
cacaacattcgtgatatgaaagttctccataccattcgagacactccttcaaatttgaaa
ggcatttgtgctttgagtgccagcagtgataactcactcttggcataccctggcagccct
catacaggagaagttcaaatatttgatgtcacgaacctcaaagctgtcaccatgatacat
gctcacaacaatcctcttgctgccatggctttcaacaaagaagcgagtcgtctcgcgaca
gcttctgataaaggcactgtaattagagtgttttcagttcctgatggcaagaaacttttt
gagtttcgtcgtggagttaagagatgtgtttccataaattcactctctttcagcagcaat
gcaatgttccttacagcttcaagtaacacagaaactgtgcatatatttaagcttgatctt
tcatctgctgcctcatctccacaaagtgttgcaccaacacgaaacggctatcagtcctct
gacgttgctaacaacaacaagcatgattcatcttggatggattacttcaataaagtgctg
accacatcatccaactaccttccaatacaggtcaccgatattcttaaccaggacagggct
tttgctactgtcaaattaccaacagcatgcagaaagaatatttgcactttggccgtaatt
caaaagctgttacgtgtgattgtcgcttccactgacggttatttatacatctacaatttg
gatacagaggaaggtggcgaatgcactctcattcgtcaacacaggctaaatattgagagt
ggttttatcacaagacaatcaccaacgcctatctcaccatcaagctatgctgaagcaact
cgaggacagcaaaccgttccaaaaataaaagacagatctggaagcacaggtagttctgca
agtagcagtagtgactctacattctctaatgtttcgaaatcagactcatcgcctggacgt
gtacgatacacacactcacccaaagggagattgaaaggcatgatagatgaacatgaactt
gccgaggacttgcctttggatgatgaaagcgaatttccacccatgacaatgtattgtgaa
taa
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