Styela clava (leathery sea squirt): 120335635
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Entry
120335635 CDS
T07291
Name
(RefSeq) sodium channel protein type 3 subunit alpha-like isoform X1
KO
K04836
voltage-gated sodium channel type III alpha
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120335635
Ion channels [BR:
sclv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120335635
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Exo_endo_phos_3
Motif
Other DBs
NCBI-GeneID:
120335635
NCBI-ProteinID:
XP_039259113
LinkDB
All DBs
Position
Unknown
AA seq
2037 aa
AA seq
DB search
MSALELADITVEKLTREHLRNINDTTSTKSRDEHRASRRGSDNTPPPIHPNIDLEQGKTL
PEYLQGDIPDDYLCQELVDIDPYYADKRTYVILDKNYVIYRLTCDRALYCLGPLNIVRKI
TNRIYIHSVFNSIIMLTILCNCFFMTFGKNIDWVDNYVERIFLGIYSFEAIVKILSRGFA
FSPFTYMRDAWNLLDISVIITAYMDIAMAVRAASQGEGKGTKIPGMAALRAFRVLRALKA
ISAIPGLKALVSALIESVKALKDVMILTFFCLSVFALIGLQLFMGSLRNKCVRSWPPHHY
SILMDMWLTGNFTNFNFSDPYPISPNDTFEVVDPNITVSKAMECKPNPDCNSTTYIWYNQ
SYEEWIADECNYCFVRGDPWLCGNGTNSGQCWDGFFCVLTGDNPNFDYTSFDTFYLAFLS
LFRLMAQDYWENLYQLTLRANGKVYMIFFMIVIFLGSFYLINLILAVVAMAYEDQYQLVA
QEEERKRELMRMKKNELDALLVQVHDAEVKLESRRTSRANIDSSPASSNGSIASLLRRRS
STQPGRQFTSPRIIKKLNGNHNNPVDNETIPETDSIGSRTGSVNFSLLNENMASSNSRRQ
TVTQIPEIIINSSSFNGPHHPVEELHQSVLAEKLHLELNKIKDQMILPDKQPNNEVSSTI
VDQNGTVMLVSRHPSQPTLLPEVIVESPSEHNGRSSPECEMIPMDNLKPTMSRSRLPSID
LLSEPQLALLKQRALSQASIMTAELDKQDRKCSPCWYDFTDIFCIWNCGGPWTKVHRVCK
IICEDPFLDLFITICILLNTGFLAAEHKPMDESFSNVLKMSNDVFTAIFTAEMVIKMVGM
HPYYYFQEAWNCFDSVIVSFSLLEYALVQVEGLSVLRTFRLMRVFKLAKSWPTLNMLIKI
IGNSMGSLGNLTFILLIILFIFAVVGMQLFSEKYEKANLILEAKGEVMRWHMMDFFHSFL
IVFRILCGEWIETMWDCMRWGGELAGVCIPVFMLVHVVGNLVVLNLFLALLLSSFSADTF
VKDEDEELNAIQLSMIRIHKFIDYLKSKIALAKSIIIESCRKKFVNGFDSKLKTKRYNCN
DVAGKENPESTGNGLTSGMKLTSIVKPYEGLIEEKQRKSCFDLSHNTKMADHDIHVTWSP
HHIKVPRASEESDVDISDSEDEQSLGGESAANSFISYDGSSRSGSGTWETRSECNQIEVP
STQPLDEQDLPAPCWPLRCSARVVCCNPPVDEGCCLVWWNMRKICFRIVEHAWFESFIIL
MILFSSGALAFEDIYLKDKKVLQRILKYADRIFTFVFIFEMLLKWVGYGFKKYFTNAWCW
LDFLIVGVSLIGLVAEALGRDNIGSIRSLRTLRALRPLRAMSRFEGMKVVVNALVGAIPS
IFNVLLVCLIFWMIFSIMGVNLFAGKFYKCLNTTSLERLEAHNVTIGNITFPNITKDVCE
YIHQNVSSEIMWRNSKVTYDNVFNGYLALLQIATYKGWMDIMYDAVDVTKENEQPSFEQS
SGYYIYFVIFIVFGSFFTLNLFIGVIIDNFSQQKKKLGGQDIFMTEEQRKYYNAMKKLGS
KQPQKPVPRPNNELQGWVFDIVTHQTFEIAIMTLIILNMVTMMIEHHDMSVMLDKILEYI
NYIFITVFTGEFVLKLFALRLYYFKNAWNVFDFIVVILSIVGTTMSGVIKQYFVQPTLFR
MIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIALLLILVMFIYSILGMSQFAYVQ
RGGIIDDIFNFETFANSFLCLFMITTSAGWAGLLSPIMNFGPPDCDPTLDNGNPNKNGDC
GSSIGVPFFVTYLIMTFLIVVNMYIAIILENFGVATEESAEPLGEDDFEMFYEVWERFDP
KATQFIAYEHLSDFVDSLDEPLRVAKPNRYTLIDMDLPMVMGDRLHCLDVLFALTKRVLG
ESDELEGLRSQMEEKFMESNPSKLSYEPITTTLRRKQEELSAVIIQRAWRRYRIRHAVHT
ASRMFLGLNLSEPDGNEPTDGERNALRLGDNQIERTRSLVSIMNETVGDRSQQNAVV
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgttggaattggctgacatcaccgttgaaaaattaacccgtgaacatctcagg
aatataaatgataccaccagtacaaaatcaagagacgaacacagggcgagtagaagggga
agcgacaatacacctccgcctatacacccaaacatcgatttagagcaaggaaaaacgttg
cctgaatatttacaaggagacatacccgatgattacctctgccaagagttggttgatatc
gatccgtactatgccgataaaaggacgtacgtaattttggataagaactacgtgatctac
aggctgacatgtgacagggcgttatattgtctcggtcccctcaacattgtaagaaaaatc
acaaacagaatctacattcattcagtgttcaacagcattattatgctcaccattctttgc
aattgcttcttcatgacattcgggaaaaatattgactgggtagacaactacgttgagcga
atattcctgggaatctactcttttgaggccatcgtcaaaatactatcacgcggtttcgct
ttttctccttttacgtacatgagagatgcttggaacttacttgatattagcgttatcatc
actgcctatatggatatcgcaatggctgttcgcgctgcatcgcagggagaagggaaagga
acaaagataccgggcatggctgctttgagagcgtttcgtgttttacgagcattgaaagct
atatcagccataccaggcttgaaagctctagtgtctgcgcttatagaatcagttaaagca
ttgaaagacgttatgattttaacgtttttttgcctgtcggtttttgcactgattggactt
caactatttatgggaagtttacgaaacaaatgtgtgcgatcgtggcctccacatcattac
agcattttgatggatatgtggctgacaggaaattttacaaatttcaatttttcggaccct
tatccgatctcacccaacgatacctttgaagtagttgatccaaatatcaccgtatctaaa
gccatggaatgcaagccgaatccggactgcaattcgacaacatacatatggtacaatcaa
agctatgaggaatggatagcagatgaatgtaactactgtttcgtcagaggtgatccgtgg
ttatgcgggaatggcacaaatagcgggcaatgttgggacggattcttttgcgtattgacc
ggagacaacccaaattttgattacacaagttttgataccttttacttggctttcctctca
ttgttccgtttgatggcgcaagattattgggagaatctttaccaattgacccttcgtgca
aacggaaaagtttacatgatattttttatgatcgtcatatttctcggttcgttttacttg
attaatctcattttggctgttgttgctatggcctacgaagatcaatatcagttagtagca
caagaagaagaacgaaaacgagaattgatgagaatgaagaaaaatgaactggatgctcta
ctggtacaagttcatgatgctgaagtgaaacttgaaagtagaaggacaagtagagcaaat
atcgactcttctccggcgtcatctaacggttcaatagcatcattattacgaagaagaagt
agcacgcaacctggtcgccaatttacaagtccaagaataattaagaagttgaatggaaat
cacaataatcccgtcgacaacgagacaataccggaaactgacagcattggaagcagaaca
ggttctgttaatttttccttattgaatgaaaacatggcatcatccaactccaggcgtcaa
actgtgacgcaaattcccgaaattatcatcaattcttcgtcattcaacggaccacatcac
ccagtggaagaattacaccaatcagttcttgccgaaaaactgcacctagaattaaacaaa
attaaagatcaaatgatacttccagacaagcaaccaaataatgaagtcagcagcacaatt
gtagaccaaaacggcacagttatgttagtgtctcgtcatccgtcccaaccaacattgcta
ccagaagtcattgtggagtcaccaagtgaacataacggaaggtcatcacctgagtgtgaa
atgattccgatggacaatttaaagccaactatgtcaagatcgcgactgccatctattgat
ctactaagcgagcctcagctggctttgttgaaacaaagagcgttgagtcaagcttctatt
atgacagcagaattggacaagcaagatcgaaaatgtagtccatgctggtacgacttcact
gatatattttgtatttggaactgcggtggaccgtggactaaagttcatcgagtttgcaag
ataatttgcgaagatccattcctcgacctttttattacaatatgcatccttttgaacacc
ggattcttagcagcagaacataaaccgatggatgaatcattttcaaatgttttgaaaatg
tcgaatgatgtttttacagccatttttaccgcagaaatggtgatcaaaatggtgggaatg
catccatattattatttccaagaagcgtggaactgttttgactccgtcattgtatcattt
tctttgcttgagtacgctctggtgcaagtggaaggactttcagtgcttcgaacgtttcga
ttgatgagggttttcaaacttgcaaaatcttggcctacattgaacatgctaattaaaatt
attggaaattcgatgggatcgttgggaaatctgacgttcattcttctaattatattgttt
atctttgccgtcgttggaatgcaattgttcagcgagaaatacgaaaaagcaaatttgatt
ttggaggcaaaaggagaagtgatgagatggcacatgatggatttctttcactcattttta
atcgtatttcggatattatgtggagaatggatagaaactatgtgggactgtatgcggtgg
ggaggcgagttggctggagtttgcatccctgtttttatgctggttcatgttgtcggaaat
cttgtggttctgaatttgtttctggcgcttttactcagttcatttagtgctgatactttt
gtgaaagatgaggatgaagaattaaatgcaatacaactttcgatgattagaattcataaa
ttcattgattacttgaaatcgaaaattgcgttggcaaaatcgattattattgaatcatgc
agaaaaaaatttgtcaacggatttgattcaaagttaaaaacaaagaggtacaattgtaat
gacgttgctggcaaggagaatccagaatcgaccggaaatggtctcacttcaggaatgaag
ttaactagtattgtcaaaccttacgaaggcctcatcgaagaaaagcagagaaaaagttgc
tttgatttatcacataatacaaaaatggcggatcatgacatccacgttacttggtctccg
catcatatcaaagttccgagagcaagcgaagaatctgatgttgatatatctgacagtgaa
gacgaacaatcacttggcggtgaaagcgctgcaaacagttttatatcgtatgatgggagt
tcacgaagtggatccggaacatgggaaacaagatcagagtgtaatcagattgaagttccg
tctacgcaacctttagacgaacaagatcttccagcaccttgttggcctcttagatgttca
gccagggttgtttgctgcaatcctccagtcgatgaaggatgctgtctagtttggtggaac
atgaggaaaatatgtttcagaattgtggaacatgcttggtttgagagtttcatcatcctt
atgattttatttagcagcggtgctttggcgtttgaagatatttacttgaaagataaaaaa
gtgttgcaacgcatattgaagtacgccgatcgaatattcaccttcgtctttatattcgaa
atgttattgaaatgggtcggatatggattcaaaaaatattttacaaacgcttggtgctgg
ttggatttcctaattgtcggagtatcgttgattgggttggttgcagaagcattgggaagg
gacaatattggaagcattcgatcattgagaacgctcagagcactaagacctttgagagca
atgtctaggtttgaaggcatgaaggttgtcgtaaatgctctggtcggtgcaataccgtcg
atttttaatgtccttctcgtctgcttaatattttggatgattttttcaattatgggagtg
aatttatttgctggaaaattttataaatgcttaaatacgacctcactggaaagattagaa
gcgcataacgttacaattggaaatataacatttccgaacataaccaaggatgtttgcgaa
tatatacatcaaaatgtaagcagtgaaataatgtggagaaattcgaaggttacctatgac
aacgttttcaacggttatttagctttattacagatagctacttacaaaggttggatggac
atcatgtacgatgccgtagatgtcacaaaagaaaatgagcaacctagttttgaacaaagc
agtggatattatatatattttgtcatttttatcgttttcgggagcttttttacattaaac
ttgttcatcggtgtcatcattgataacttcagtcaacagaagaaaaaattgggaggccaa
gatattttcatgactgaagaacaacgcaaatactacaatgccatgaaaaaattgggatcc
aagcaacctcaaaaaccagttccccgaccgaacaacgagttacaaggttgggtattcgac
atcgtcactcatcaaacatttgaaatagccatcatgacactcattattttgaacatggtg
acgatgatgattgaacatcatgatatgtcagtcatgttggacaaaattttggaatacatc
aattacatttttatcacagtatttactggagaatttgtgttgaagttgttcgccctccgc
ctttattatttcaaaaatgcttggaacgtatttgacttcatcgttgtcatattgtcgatt
gttggtacaactatgagtggagtgattaagcaatattttgtgcagcctacccttttccgc
atgattcgacttgctcgaattggtagaattttgcgtttaattcgaggtgcaaaaggaatt
cgtacactgcttttcgctctgatgatgtcactgccagctttattcaatattgcactgcta
ctcatcttagtcatgtttatttactcaatattggggatgtctcagtttgcttatgttcag
cgaggtggaataattgacgacattttcaattttgaaacatttgcaaattcatttctttgc
ttgttcatgataacaacatcagcaggttgggccggtttgctaagtccgataatgaacttc
gggccaccagattgcgatccaacactcgataacgggaacccaaataaaaatggcgattgt
ggctcgtctatcggagtaccattttttgtcacgtatcttattatgacgttccttatcgtt
gtaaatatgtatattgcaattattttggaaaactttggtgttgcgacagaagaaagtgct
gaacctctaggagaagatgatttcgaaatgttttacgaagtttgggaaagattcgatcca
aaggcgacgcaatttattgcgtacgagcacttgtctgatttcgtggacagcttagatgaa
ccactgcgagtagcaaaacccaatcgatatacattaattgatatggatcttccaatggtt
atgggggacagactacattgcctcgatgtcctattcgctttaactaagcgagttttagga
gagtcagatgaactagaaggactaagatcacaaatggaagaaaaattcatggaatcaaat
ccttcaaaactatcctatgaaccaatcacaacgactttacgacgaaaacaggaagaacta
tcggctgttatcatacagcgagcatggcgccgctacagaattcgtcacgctgtgcatacg
gcgtcgcgaatgtttttaggattaaatttgtctgaaccagatggtaatgaaccaactgat
ggagagcgaaacgctcttagattgggcgataaccaaattgagagaacaagatctcttgta
agtatcatgaacgaaacagtaggagatcgttctcaacagaatgctgtcgtttaa
DBGET
integrated database retrieval system
