Styela clava (leathery sea squirt): 120335690
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Entry
120335690 CDS
T07291
Name
(RefSeq) homeotic protein caudal-like
KO
K09343
homeobox protein Nkx-2.3
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120335690
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
120335690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
120335690
NCBI-ProteinID:
XP_039259202
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MLSSPQISTPFSVKDILNLERQRQEASFLSEEISQDSEIISQSLNSVTTSPQIERTPEFQ
GNKNELRYGIDSSESLISNICHNMATDGFSKAANGHAFSYMPDMPPHGYNTSSITAHSVD
KTTTNFGNFQSTMNRDDPQSGSPINIVPYYNGNKSSSPYGQGFAPTSTEDIKESVQRVDR
VSPDSVNQFPYEAMSSHTKITSLKSNDCVGNEFPSSTSPRIATTGYHHSDLGYSTTYQSS
SSSQPHVAPYPFGYSHQPYSSSQEATQQQNIEMNVSQPQYTSLSYTPRHQLGVPSESSPH
SAHYYSQGHTASDDGSDDVIDPTGPAELVGSVLSKTPFSSGGAVFQSSNELTHASERVHD
LDDQFNRDTNTRSTESDAAQDDISSHMGESEKSDNISNCSGSPEDDDKKRQDDDQSKNRQ
RTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLAQILKLTSTQVKIWFQNRRYKCKR
QRQDKTLELASACPPRRVAVPVLVRDGKPCLGSPTGMGGGHPSFQAPYSAPYNVTVSPYH
SYPSSYSSCGYNTYHHPHNPNGYSTNAAAAAAAAAYGSAAAVSAGYNGLSAGAAMGSGMG
TVGGMANPALHHQSTVGAAPFSTMQGQMQQQTGIRNHSASDYMYKLGLCT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctatccagtccccaaatatcgacaccgttttcagtcaaagatattttgaatctcgaa
agacaacgacaggaggcatcttttttatcggaagaaatttcacaagactctgagatcatt
tcacagtcgttgaactctgtaacgacatcgcctcaaatcgagaggactccagaatttcaa
gggaacaaaaacgaacttaggtacggtatcgattcatcggaatccctgatctcgaatatt
tgtcacaatatggcgaccgacgggttttcaaaagcggcgaacggacatgctttttcatat
atgccggacatgcccccacatggatacaacacaagttcaataacagcacacagcgtcgac
aaaactacaaccaatttcggaaattttcaatcaactatgaatcgggacgatccgcaatct
ggttctccgataaatattgttccgtattacaatggcaataagtctagttcgccatacggg
caaggttttgcacctacttcaactgaagatattaaagaatctgtgcaaagagtagacaga
gttagtcccgattccgtaaaccaatttccatatgaggcgatgtcatcccacacaaaaata
acgtcgctaaaatctaatgattgcgtcggtaacgaatttccatcatcaacatctcctcgc
attgcgaccacaggttaccaccatagcgatttgggctattcaacaacgtaccagtcgtcg
tcatcaagtcaaccccacgttgcaccatatccatttggctactcacaccaaccgtattca
agctctcaagaagcgacacagcaacagaacatcgaaatgaatgtaagccagcctcagtac
acaagcctgtcctacacaccacgccaccaactgggtgtcccaagcgaatcttcccctcat
tcagctcattactacagccaaggacacacagcatcagatgatggaagcgacgatgtgatt
gatcccactggcccggcagaattggttggttctgtactttcaaaaacaccattttcatct
ggaggagcagttttccaatcaagcaacgagttaactcatgcaagcgaaagagttcatgac
ctcgatgaccaatttaacagagatacaaacacaagatccacagaatcagatgcagcgcaa
gacgacataagcagccacatgggagaatcagaaaagtcggacaacatcagcaattgtagt
ggaagtccagaagatgacgacaaaaagcggcaagacgatgaccagtctaaaaatcgtcaa
cgaacaagacgtaagccaagagtattattctcccaagctcaagtgtttgagttagaacga
agattcaaacaacagcgatatttgtcagcaccagaaagagaacacctggcgcaaatattg
aaacttacttcaacacaagtaaaaatatggtttcaaaaccgtcggtataaatgcaagcga
cagcgtcaggataaaactctcgaactagcaagcgcgtgcccgccaagaagagtcgccgtt
cctgttcttgtacgagatggcaaaccatgtctaggtagcccaacgggaatgggtggtggc
catccttcttttcaagctccgtactctgccccgtataatgtaacagtttcgccgtatcat
agctacccaagttcatacagttcatgtggatacaatacgtaccatcacccccataatccg
aatggctattctactaacgccgcggcggcagctgccgcagctgcatatggatctgcggcc
gcggtatccgcaggatataacggtctttcagccggggcagcaatgggatcaggaatgggt
accgtaggcggtatggccaatccagctcttcatcatcaaagcacagtcggagcggcgcca
ttttcaacaatgcagggacaaatgcaacaacaaactggcattagaaatcactcagcaagc
gattatatgtataagttgggactttgcacctaa
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