Styela clava (leathery sea squirt): 120335701
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Entry
120335701 CDS
T07291
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120335701
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120335701
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120335701
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120335701
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Helicases
120335701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
120335701
NCBI-ProteinID:
XP_039259215
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MDDDLSINLSASGNFPLHKKKNRFWGNKNYRNTSRYRYVGQNAKPTILNTSKVKILDSED
KSVLKQGKNENDDYSTALHFKGVEVLPNEKPKKVKYFAKRSNTKGKTVVSLNTDESKSST
DKQKTNLNEITKKTSVTAHRKSSLFNQNPQIPKVSQPDISSVQEDIFSRENFSDLEIHPH
LLSYINHNLKLKNMTSIQQKAIPVLLSGRDALVKSQTGSGKTLAYAIPVIHRIQEIKPNI
KRKDGPIAMVLVPTRELALQSYDVFSKLTLPFCRIVATWIIGGENRKSEKSRIRKGINII
IGTPGRILDHIQTTEALSLANLRWLIFDEADRLLDMGFQKQVDAIRNAVKNQSTKKCQNV
LLSATLSDKVQRLVDLALHNPCHVQVTNTDVDSGIEKEDDEIFALPEKLIQHVCIIPSKL
RLVALATFLKAKQLRNKPVKVIVFLSCRDSVEFHYHLLKHVLRKPKLDNGMEIPLDIDLA
DSEVEHVNIVQLHGGLSQNERQEVFHSFSISDTGILLTTDVAARGLDLPSVHWVIQYTSP
GSPVDYIHRAGRTARAGNKGNALLMLTPSEVKYVNLLTQFNIQVEEMNVDDILIMGINAT
GVNKKNADFKLRLLDAAKSEATNLQSQMESYVSKSIKIKTLARTAYMSFIRAYATYPTEL
KSIFHVKYLHLGHVAKSFGLQDAPHDIVKNLQKSVGQLPVKTSFEYREAKIELTKVEKEQ
PSDSEDQKKEIIQVTKELTKPRLSRKQIMKNKMSRKPDLMSEFSSGLSSSDIPAKKMKKR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatctcagtataaacttaagtgcatctggaaactttccgctccacaagaaa
aaaaatagattctggggaaataagaattatcgaaatacaagtcggtatagatatgttgga
caaaatgcaaagcccaccatattgaatacatcaaaggtaaaaatcttggattcagaagat
aaatctgttttaaaacagggaaagaatgaaaatgatgattatagcactgcgctccatttc
aaaggagttgaagtcttgccaaatgaaaaaccgaaaaaagtaaaatattttgcaaagaga
tcaaataccaaaggaaaaactgttgtttcattgaacacggatgaatccaagtcgagtact
gataaacaaaagaccaatctgaatgaaataacgaaaaagacttctgttacagctcatcgg
aaatcatctctatttaatcagaatccacagataccaaaggtttctcaacctgatatttca
agtgtacaggaagatattttttccagggagaatttctcagatttagagattcatccacat
ttattatcgtatattaatcacaacttaaagttgaaaaatatgacttctattcagcagaaa
gcgattcctgttcttttatctggccgcgatgctctagtaaaatcccagactggttctgga
aaaaccctcgcatatgcgattccagtgatacatagaatacaggagatcaaaccaaatata
aaaaggaaagatgggccaattgcaatggtgctggtaccgacaagagaactggctctacaa
tcatatgatgttttctcaaaattaactctgccattttgcagaattgttgccacttggatc
attggtggcgaaaaccgtaaatcagagaaatctcgaattcgtaaaggaataaatattata
attgggacgccaggtcgtattttggatcatatacaaacaacagaggcactttcacttgca
aatctaagatggttaatatttgacgaagcagatcgcttacttgacatgggatttcaaaag
caagtagatgcaataagaaatgcagttaaaaatcagtcaacaaaaaaatgtcaaaatgtg
cttctgtcggctaccttatcagataaagtacaaaggctggttgatctcgctctgcataat
ccatgccatgtacaagttactaataccgatgtggatagcgggattgagaaggaagatgat
gaaatattcgcgctgcctgaaaaactcatccaacatgtttgcattatacctagtaaattg
agactcgtggctttggcaacatttcttaaagcaaagcaattgaggaacaaaccagtgaaa
gtgattgtgtttttgtcttgcagagattctgtagagtttcactatcatcttttaaagcat
gttttacgaaaaccaaaacttgataacggcatggagattcctttggatatagatctggct
gatagtgaagtagaacatgtcaacattgtacagcttcatggtggactgtcacaaaacgag
agacaagaagtttttcacagcttttcaattagtgatactggtattttactgacaacagat
gttgccgcgagaggtttggatcttccaagtgtacattgggtaattcaatacacgagtcca
gggagtccggttgattatattcatagagctggaagaactgcaagagcaggaaacaaaggt
aatgctctcctgatgctgacaccatctgaagttaaatatgtcaacctgctaacacaattc
aatatacaagttgaagaaatgaatgttgatgacatcttaattatgggaataaatgcaact
ggtgtgaataaaaagaatgcagatttcaaattgagacttttggatgcagcaaagagtgaa
gccacaaatttacaaagccagatggaatcttacgtttctaaaagtattaaaatcaaaacg
ctagcaagaactgcgtatatgtcttttattcgtgcttatgcaacatatcccacagaactc
aaatcaatttttcatgtcaaatatttacaccttggacatgttgctaaaagttttggattg
caggatgctccacatgatattgtgaaaaatcttcaaaaatctgtcggccagttaccagtg
aaaacttcattcgagtatcgagaggcaaagatcgaattgactaaagttgaaaaagaacag
ccatcagactcagaagatcaaaagaaagaaattatccaagtgacaaaagaattgactaaa
ccacgccttagtaggaaacagataatgaaaaataaaatgtctcgaaaacctgacttaatg
tcggagtttagcagcggtttatcaagttctgatattccagctaaaaaaatgaaaaagcgt
tga
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