Styela clava (leathery sea squirt): 120336202
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Entry
120336202 CDS
T07291
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120336202
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120336202
Factors involved in mRNA localization
Trans-acting binding proteins
120336202
mRNA cycle factors
P-body specific factors
120336202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
CEBP1_N
RRM_1
ANCHR-like_BBOX
ParB
Motif
Other DBs
NCBI-GeneID:
120336202
NCBI-ProteinID:
XP_039259755
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MNTNNMTATAGYQSEELFRNMNNLLGNTLDLRGINEGASTSAEPTRDSSYAAWSAQAGSP
NKQTTGSGNANSQGNNGREVSDFINKISGMKKDLTSSNSNNNNTNSNTENLVNIINHQRE
MAAKQMAKNTDVQQRLKELQHPGISMRRTVPDVHQVPAFDYPIIPEGYANKLDIDTSIRQ
IMNRSARRADGLRARTPDPGDFASLIGPPLLSPQELQQTLSLSMEGAPLHLSTLNSDGLS
THSSHDASGSSMNSSILSSGSDPMSISELVSGIQGLHMGPSRNSISGRSTPIVPSPTDWC
DASTPRQYYNPDGDIGMINPFSSEQLLDVASLYGVSDKMEYDARLHRSAAASCEATFTWS
GHLPIRHYVAPTYSPKVFLGGVPWDITEASFHLTFKPYGLVRVEWPGKDTKGPRYPLRAG
YVYLLFESDKSIKSLLHNCTRDVTTNEWFFRLSSRRMRSKEVQIIPWVITDSNYMRVSSA
RLDANKTIFVGALHGMLTSEGLAHVMNDLFGNVVYAGIDTDKYKYPIGSGRVTFNTHSSY
MKAVKAAFVEIKTPKFSKKVQIDPYLEDNAMCNLCQAQSGPYFCRDLPDCFKYYCRQCWE
WQHSIGDLRNHRPLMRNQRRRY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaacaatatgacagcaacggcaggctatcaaagcgaagagctttttcgtaat
atgaataatctgctcggcaatacgttagacctgcgcggcatcaatgaaggagcctccact
tcagcagaaccaaccagagatagctcgtatgcggcttggtcagcacaggctggttcaccc
aacaagcaaacgacagggtctggcaacgcaaacagtcaaggaaacaatggcagagaagtt
tcggatttcatcaacaagatcagtggaatgaaaaaggacttgacctcttcaaatagcaat
aataataacaccaacagtaacacagaaaatttggttaatattatcaaccatcagcgagaa
atggcggcaaaacagatggcaaaaaacacggacgtacagcaaagactgaaggaactgcag
catccagggataagtatgcgtcgcacagtgccggacgttcatcaagtccctgcctttgac
tatccgattattcctgagggctacgcaaacaagttggatattgacactagcattcgacaa
attatgaatcgttctgctcgccgagctgacggactccgcgcaagaacaccagatcctggc
gattttgcttcgctcattggaccgcctcttctgtctccacaggaactccaacaaaccctg
tcattgagcatggaaggtgcaccgctccatcttagtacattgaacagcgatgggctaagc
acacattcatctcatgacgcaagtggctccagtatgaattccagcattttgagttctgga
tctgatccgatgtccatatcagaattagtgagtggaattcaaggtctccatatgggacca
agtcgcaattcaatatctggtcgatccactccaattgtgcccagtcctacagactggtgc
gatgcgtccaccccgcgacaatattacaaccccgatggcgacattggcatgattaacccg
ttctcctcagagcaactgttggatgttgcttcattatatggagtctctgacaaaatggaa
tatgacgcaagacttcatcgttccgctgctgcgtcgtgtgaggcgacctttacttggagc
gggcatcttcctattcgccattacgttgcgcccacttattcaccaaaggtgtttcttggt
ggagtaccgtgggacatcaccgaagcgtcattccatctgactttcaaaccatacggacta
gttcgggttgaatggccaggaaaagacaccaaaggacctcgctatcctctacgagctgga
tacgtttatctgctatttgaaagtgacaagtccataaaaagtctcctgcataactgtact
cgagatgtcacaaccaacgaatggttctttaggctgtcgagtagacgcatgcgcagcaaa
gaagtgcagataataccatgggtgatcacggatagcaattatatgcgggtttcatctgct
cggttggatgccaacaagaccatcttcgttggagctcttcatggaatgctgacgtcagaa
ggtcttgcacacgtaatgaacgatctgtttggtaatgttgtgtatgctggaatagacact
gacaaatacaagtacccaatagggtctggccgggttaccttcaatacccacagcagttac
atgaaagcagtgaaagctgcattcgttgaaatcaagactccgaaattctccaagaaggtt
caaatcgatccatatctcgaggacaacgctatgtgcaatctgtgccaagctcaatctggc
ccatatttttgcagagatcttccggattgcttcaagtactactgtcgtcagtgctgggaa
tggcagcattcaattggcgatctccgtaatcatcgtccactgatgagaaaccagcgtaga
cgatattga
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