Styela clava (leathery sea squirt): 120336394
Help
Entry
120336394 CDS
T07291
Name
(RefSeq) Werner syndrome ATP-dependent helicase-like
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclv03032
]
120336394
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120336394
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120336394
DNA replication proteins [BR:
sclv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120336394
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120336394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
RecQ-1-like_HTH
Motif
Other DBs
NCBI-GeneID:
120336394
NCBI-ProteinID:
XP_039259998
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MELSSEYIIDRILTICESGQDIVAEIEGNTEESDELYSSAKTRIFATLSKLEDGFSELRK
IFDGTCSKSICDNEKDNPNDACIIVDTSSESYELSNKSAEPGISDVTSTSDETLVSDKKW
IFKNNGNTSSLSNSSESNKTISSEAAGKDNISNSEVSSGKPKKFFVIEDDIDFLIEEEEQ
AEYEKQFNNCAIFPNDSSIIEPKSNTNVSKITSHEDEDLFEDDDLDLAEIEKIESLVSSG
EAANNIENKKYDIPLSEKGYDYQNKNFHDQGSKIVTDYSNDDVEFIDDYPFGEEQDITIQ
EDEDGSKSKDNSLNEEELLDPNYIPPDKQYTDVLKEYFGHSKFRPMQWKIINAALNEGRD
QCVVMATGYGKSLCYQFPPVYLSSTAVCISPLISLMEDQVLKLETNNIPACFLGSAQENT
AEVYSAMMRGKYRVVYITPEYAAVASSNLRELSERVGISLIAIDEAHCVSQWGHDFRDSY
RKLGQLKQLLPNVPILAVTATATPEVRKDICASLKLKNPVITLTSFDRVNLYLDVYNKTS
DPASDLRSLMIQKSVRGAIRYEFDGPTIIYCPTKKETARIGSVVKSLGVRSAIYHAGMSM
DRRKQAHHRFMRDELQCIIATVAFGMGIDKPDVRRIIHYGAPKDIESYYQEIGRAGRDGL
PSSCHTFFTSGDFNTNRFFLRDISNPKFRDHKAAMILKMENYLATVGCRRKSVLSHFDKR
AQSSIAGTEKCCDNCKRRIENQKKSGGTVCYDITEGCEEKNFGDEAKQMFEAIKITGERF
GLGMPTSFLSGSKSKKMFDRFLRHAQFGMGSNHTQKWWKALGKALLNAGYLKEKQMKKGS
FGSLVEISLKGSQWIKKRTFSPDLKLMLAPTVDLMEKQPRTSHATPVTNQQVDQSAEILP
STPYTEITREQLDKLTLGPYITDDSVKKITSTQNKKTGENDEHSGPLYSLLLSLRNNIAH
DMDIPPHLVANNKDLLELAKVRPKDKDMLLLVDGMSVVKVKRLGEQVVAVIQSFCEEHQA
SFNNFPEEDSDLASSQISIDKRVKNETGVPTKSMSDTVKITYNLFHDRGMALEEISKERG
LQLSTLGSHLAEALHAGHPVNFQRLGISKELINNVEEGIRKPPLNSDISRVYPIKDQVTM
PIEWMQIKIVRAFLMIKYGMTSYGISGSISKNNSSKGPSQTIANLKQFQATKGGRPHTQL
TLKADSGGSKLGLISLSGGEELARRKAVTTSRHFLTPNLTNPSPSSPGGFADYDDDDKST
SYSKKGSTKRKVPSWGRGRGSKFNFKRRKTNKMF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggaattgagcagtgaatatatcatcgatcggattcttactatctgtgaatccggtcaa
gatattgttgctgaaatagaaggaaatacagaggaatcagacgagttatattcatcggcc
aagacaagaatttttgcaacactgtcaaagttagaagatggtttttcagagttgaggaag
atatttgatggaacatgttcaaaatctatttgtgataacgaaaaagacaatccaaacgat
gcctgcattattgttgacacaagttctgaatcgtatgaactgagtaataaatctgctgaa
cctggaattagtgatgttaccagcacatcagatgaaacactggtttctgataaaaaatgg
atattcaaaaacaatggaaatacgtcgtcattgtccaattcatcagaaagcaataagaca
atttcttccgaagcagctggaaaggacaatatatcaaattctgaagtttcatctggaaag
ccgaaaaaattttttgtcattgaagatgacattgattttctgattgaagaagaagaacaa
gctgaatatgaaaagcaattcaacaattgtgctattttccctaatgattcttccataata
gaaccgaaaagcaataccaatgtttcaaagattacaagtcatgaagatgaggatttgttt
gaagatgatgacttggatctagctgaaattgagaaaatagagagtttagtgtcatctggt
gaagcagccaataatattgaaaacaagaagtatgatattcctctgagtgaaaaaggttat
gattatcaaaataagaacttccatgatcaaggctcaaaaatagtaactgattattcaaat
gatgatgtggaatttattgatgattatccttttggtgaagaacaagatataacaatccaa
gaagatgaggatggatctaaaagtaaagataattctctcaatgaagaagaattactcgac
cctaattatattcctcctgacaaacaatatactgatgttctgaaagagtattttggccat
tcaaagtttaggccgatgcaatggaaaattataaatgcagcattgaatgagggcagagat
caatgtgttgttatggcaacaggctatggcaaaagtttgtgttatcaatttccaccggta
tacttgagtagtacagcagtatgtatatcacctctgatatcgctgatggaagatcaagtt
ttaaaattggaaactaataatattcctgcttgttttcttggttctgcacaagagaatact
gcagaagtttatagtgcaatgatgagaggaaaatacagagttgtttacataactcctgag
tatgctgctgttgcatcatctaatttgagggaattgagcgagagagtcggcatttcactc
atcgcaattgatgaagctcactgtgtatcacaatggggtcatgatttcagagattcttac
agaaaactcgggcaattgaagcaattacttccaaatgttcctatattggctgttactgca
actgctactccggaggttcggaaagatatttgtgcatctttgaaacttaagaatccagta
atcactttgacaagttttgatcgggtcaatctctatcttgatgtttacaacaaaacgagt
gacccagcttctgatctacgttctcttatgatacaaaaatcagtcagaggtgccatcaga
tatgaatttgatggcccaacaatcatatattgccctaccaaaaaagaaactgccagaatt
ggctctgtggttaaatcacttggggtgaggtcagcaatctaccatgcaggtatgtcaatg
gacagaagaaaacaagctcatcataggttcatgagggatgagttacagtgtattattgct
actgttgcattcggtatgggaatagataaaccagatgtaagaagaattatacattatgga
gctcctaaggatatcgaaagttattatcaggagataggtcgagcaggaagagatggatta
ccatcaagttgtcatacattttttacatctggtgattttaacacaaacagattttttctg
cgggatatatcaaatcccaaatttcgggatcacaaggcagcaatgattttaaaaatggag
aattatctggcaacagttggatgtcgacgaaaatcagttttatctcattttgataaaaga
gctcaaagtagtattgctggaacagaaaaatgctgtgacaattgcaaaagaagaatagag
aatcagaaaaaaagtggtggaactgtttgttatgacattacagagggctgtgaggaaaaa
aattttggggatgaagcaaaacaaatgttcgaggcaatcaaaattactggggagagattt
ggacttggaatgccaacttcatttttgtctggatcaaaaagcaagaaaatgttcgatagg
tttttgcgacatgctcaatttggaatgggttctaatcatacacagaaatggtggaaagca
ttggggaaggctttattaaatgctgggtatttgaaagaaaaacaaatgaagaagggatct
tttggttcactcgttgaaatcagtttaaagggatctcaatggattaagaaaagaactttc
tcaccggatttaaaattaatgttggcacccactgttgatttgatggaaaaacaaccaaga
acatcacatgctactcctgttactaatcaacaagttgatcaatctgctgagattttacct
tcaacaccatacacagaaattacgagagaacaactggacaaacttactctaggtccctat
atcacggatgacagtgtgaaaaaaataacatcaactcagaacaaaaagactggagagaat
gatgaacatagtggaccattatatagtttgttactttcgttgagaaataatattgcacat
gatatggacattccacctcatcttgtagccaacaacaaagatcttcttgaacttgcaaaa
gtacgaccaaaagataaagatatgttgttattagttgatggaatgtctgtagttaaagtt
aaaagattgggagagcaagttgtagcagttattcaatcattttgtgaagaacatcaagct
tcatttaataattttcctgaagaagacagcgatctggcttcatcacaaatatctattgat
aaaagagtcaagaatgaaacaggagttcccacaaaatcaatgtctgatactgtcaaaatc
acttataatttgtttcatgacagaggaatggcattggaggaaatatctaaagagagggga
ttgcaactatcaacgttaggaagtcatcttgctgaagctttacatgctggtcaccccgtt
aattttcaacgtcttggaatcagtaaagaactgataaataatgttgaagaaggaatacga
aaaccaccactcaattctgatattagtcgagtctatccaatcaaggatcaagtcacaatg
ccaattgaatggatgcaaattaaaatagttcgagcatttttgatgatcaagtatggaatg
acatcttatggaatatcaggaagcatttcaaagaataattcttctaaaggaccttcacaa
actatcgctaatctgaagcaatttcaagcaacaaaaggaggcagaccacacacacaactg
actttgaaagcagacagtggagggtcaaagctcggtttaatatcattatcagggggcgaa
gaattagccagaagaaaggctgtaacaacatcaagacattttttgactcctaatttaact
aatccttcaccttcatctcctggtggatttgctgactacgacgacgatgataaatcaact
tcatattctaagaagggatcaacaaaaagaaaagttccatcctggggtcgaggacgaggc
tcaaaattcaactttaaacgaagaaaaacaaataaaatgttctga
DBGET
integrated database retrieval system
