Styela clava (leathery sea squirt): 120336499
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Entry
120336499 CDS
T07291
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
sclv
Styela clava (leathery sea squirt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
120336499
NCBI-ProteinID:
XP_039260125
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MNQPDPSNASVGGNSASNSEGLCKNSDGKTQQNPGMREDSGQNAATSSKVTSFPIGNTDN
GAGNGKDVGRKKSVKIDGFNQPKSKHKDKKISKAITHEVEKKISKCKEDKALRLDLSKSE
LITLSTHIKDLTQLAELFLYKNKLIRIPEELGNLTNLKTLALAENHLTTLPDSLSSLQNL
KMLDLRHNKLRDIPSVVYTMTSLGILYLRYNKITSINPAIKNLKLLTQLIVRENKIKFLP
SEIGHLVNLVTIDVSFNELEHVPSELGNCKLATSLDLQHNKLTTLPESLGNLTKLTRLGL
KYNQLKGLPKSLQQCIELDELNLENNNIPSLPDGFLSSLVKLTSLTLARNEFESYPVGGP
AQFHCLVSLNMEHNQVNKIPFGIFSRAKHLSKLNMRSNQLTSLPLDVATWTSMVELCLAS
NQLTRLPDDIGSLSSLEVLIVSNNLLKRIPPGIGNLDKLRFLDLEENRLESLPPNIEHLK
QLKKLMLQGNQLTVLPRGLGHLASLTVLAVGENQMVTLPEEIGNLSSLEELYLNDNPLQD
LPFELALCKKLALMSIEGCPLSQIPQPCVEGGPSTIMQYLRVHGPYRTMV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcctgacccaagtaacgcgtctgttggaggcaactcggcatcgaattctgaa
ggattatgcaaaaattctgacggtaaaactcaacaaaacccaggaatgagagaagactcg
gggcaaaatgcagctacaagttcaaaagtcacatctttcccaatcggtaacacggataat
ggagctggaaatgggaaggatgtcggtcgaaagaaatctgtcaaaattgatggtttcaac
caaccgaaaagcaaacacaaggataagaaaatctcaaaagcaataacccatgaagtggaa
aagaagataagtaaatgcaaagaagacaaagcactgcgattggatttaagtaaatcagaa
cttattacactatccacacatatcaaggatttaacacaactcgcagagctttttctttac
aaaaacaaacttatcagaataccggaagaattgggaaatttgacaaatttaaaaacacta
gcgctcgccgaaaatcatcttactactttaccagattcattgtcaagtcttcaaaattta
aagatgttagacttgagacacaataagttgcgagatattccttcagtcgtgtatactatg
acatcattgggaattttatatcttcgttataacaaaataacgtcgataaatccagcaatt
aaaaatctcaaactcctaacacaattaattgtcagagagaacaaaataaaatttttgcct
tcagaaattgggcacctagtgaatcttgttacaatcgatgtttcatttaatgaattagag
cacgtaccttcagaattagggaactgcaaattggcgacatcgttagatttacaacataat
aaattgacaacattgcctgaatcattaggaaatttaaccaagctaacgcgtcttggtctc
aaatataatcaattgaagggattgccgaagtcactgcaacaatgtattgaactcgatgaa
cttaatcttgaaaacaacaacataccttcattgccagacggatttctcagcagtcttgta
aagctcacaagtttgactcttgcgagaaatgaatttgaatcctatcctgttggtggacct
gctcaattccactgtcttgtctcactcaacatggaacataatcaggtgaacaaaatacct
ttcggcattttttcaagagcgaagcatttgtctaaattaaacatgcgtagcaatcaactt
acttcactaccactggatgtcgccacatggaccagtatggttgaactgtgtcttgcttca
aaccaattaactcgcctgcctgatgacattggcagtctttcttcattagaggtactgatt
gtaagcaataatttgttgaagaggattcctccgggcattgggaatcttgataaactcaga
ttcttagatttagaggaaaatcgacttgagagccttccacctaatattgaacatctgaag
cagctcaaaaaactgatgctgcaaggaaaccaactgacggtgctgcctcgtggtctcgga
catcttgcgagtctcacagtgttagcagttggagaaaatcagatggtaacacttccagaa
gaaataggaaacctttcatcactcgaagaactttatttgaatgataatcctctacaagac
ctgccttttgaactcgctttgtgcaagaagttagcactcatgtccattgagggatgtcca
ttgagtcagataccacaaccatgtgtggaaggaggtccaagcacaatcatgcaatatcta
agagtacatggaccatatcgcacaatggtgtaa
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