Styela clava (leathery sea squirt): 120336588
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Entry
120336588 CDS
T07291
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120336588
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120336588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
cEGF
Ldl_recept_b
EGF_CA
FXa_inhibition
Glycophorin_A
EGF
Podoplanin
TMEM154
DUF6264
Motif
Other DBs
NCBI-GeneID:
120336588
NCBI-ProteinID:
XP_039260234
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MDGMYHEHFLICMLILFCWLEPTESRSPICDAAHNLFQCNTTSQCVTLTQRCDFRYDCDD
RSDELGCVRPLCNTTTQYACANGKCIHSNWICDGENDCVDRSDETDELCSGDCKEGYFRC
QGSKACMPNSYKCDGDADCTGGEDEENCPARECRDDEFQCSNKQQCIDIDYRCDGVRECR
DRSDEVGCTDIICKDNQFTCADKTHCIDEDWKCDGISDCRDESDEQECENENRKCLPQYF
TCKSGTIPCIPLSWKCDGNKECSDGSDELNCDNIKDRCPFGESHCANRRQCISKRKFCDG
IWDCVDKSDESDCAGKKPAKSPQSCPLETHYRCPGDAGKCIPAKRLCDSIKDCPGGEDEK
QGPHFCNYNECTDATYSNCSHTCIDMRVGFKCECRKGYKLTKDKHTCEDIDECIRGISYP
CQEFCFNTNGSYKCSCYEGFTLLPNGECKPNDEKHDVSFIVSGIEDIRKITLDRHRSHKV
VVPNIPAVAVRFLALDIRNGFVYWTDPKNEAISRYKISTLDSLKASPPKPKILVRSPTIK
SPGRIALDWVHELLFWVDSDRESISVSKLDGTMSKTLYRFPNTIVAGFAVHPKYGYIYMG
CILNSGKGEGVIRRCGMNGNKTSCVSIVTRQIKAVYDIAIDYDQDILYWTDPVLELLAGS
RLDGEYRQNLIYHEAYSPLSLAVFNGRIYWIDKERHYLFSSSRSGSQVRVVNNDIYTRMD
MAVLNAGAQPPGTNYCLNSECKYLCLPEAYDSSDPRNYTCSCPDSYVPVEDDSNDCKPII
DPVQRMNSRQSKITTSPSTVRLSQSTQTTSTTSTKQTSTSVTTGAVTGQYSGNSQGMSSG
TKIVLIIGIIALLGFIVTITWCVIRLRKKHSARRSMNFNNPIYRKVTGSVASTNSSIIDK
KSKSSISESSGLTDPSPGTSSGDVSNYLEDEEEGTAGLINNEEVPEGSNPSIS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatgtatcatgaacattttctcatttgtatgttgattttgttctgttggcta
gaaccaacagaatcaagatctcctatatgtgatgcagcacacaatctatttcaatgcaat
acaacatcacaatgtgtcactcttactcaaagatgcgattttaggtatgattgcgacgat
aggtcagacgaactaggatgtgttcgcccattatgtaacactacaacacaatatgcttgt
gcaaatgggaaatgtattcacagtaactggatatgcgacggagagaacgattgcgttgat
agatctgatgaaactgacgaactttgttctggggattgcaaggagggttatttccgatgt
caagggtcgaaagcttgcatgccaaattcctataaatgtgatggagacgcagactgcact
ggaggagaggatgaagagaattgccccgcgcgagaatgcagggatgatgaattccaatgt
tcaaataagcaacaatgtatagatattgactatcgctgtgatggtgtgagagaatgtaga
gatagatctgatgaagtaggatgcactgatattatatgtaaagataatcaattcacctgt
gctgataagactcattgcatagatgaagattggaaatgtgacggaatctctgactgcaga
gatgaaagtgatgaacaagaatgtgagaatgaaaatagaaagtgtctcccacaatacttc
acttgcaaatctggaacaataccttgcatacctttaagttggaaatgtgatggaaataag
gaatgcagtgatggatcagatgagttgaattgtgataatataaaggacagatgcccattt
ggggaatcgcattgtgctaatcgacgtcagtgcatcagcaaacgcaaattttgcgacggc
atttgggattgtgtggacaagtcggatgaatctgattgtgccggtaaaaagccagcaaag
tcgccacaatcttgtccacttgagacacattatagatgtccaggggacgctggcaaatgt
attcctgctaaaaggttgtgcgactctattaaggattgtcctgggggagaagacgaaaaa
caaggcccgcacttttgcaattataatgaatgcaccgatgctacttattccaattgctca
cacacatgcattgatatgagagttggtttcaagtgtgaatgtagaaaaggatacaaattg
acaaaagacaagcacacttgtgaagatatcgatgaatgcattcgaggtatttcgtatccc
tgtcaggaattttgttttaacacaaatggctcgtacaaatgttcttgttatgagggcttc
acccttttgcctaatggtgaatgtaaaccaaatgatgaaaaacatgacgtctcgtttatt
gttagtgggatagaagatataaggaaaattactttagataggcatcgaagtcataaagtt
gttgttcctaatattcctgctgttgctgttcgctttttagccctcgatattagaaacggc
tttgtttactggacggatcccaagaatgaggccatttcaaggtataaaatatcgacatta
gatagcttgaaagcatcgccaccgaagccaaaaatattggtccgttctccgacaatcaaa
tctcctggtcgtattgccctcgattgggttcatgagctattattttgggtcgattctgac
agagaatcaatatctgtgtcaaaattagacggaacgatgtctaaaactttgtataggttt
cctaatacgatagtggccggatttgctgtccatcctaagtatggatacatatacatggga
tgcatcttaaactcagggaaaggtgaaggcgtgatacgtagatgtggaatgaatgggaac
aagacttcttgtgtgtcaattgtaacgaggcagatcaaggcagtatatgacattgctatt
gattatgatcaagatatcctatattggactgatcctgtactcgaattattagcgggaagc
cgactggatggtgaatacagacaaaatctaatctaccatgaagcctattctccattatct
cttgctgtattcaatggaagaatatactggatagacaaggagcgacactatttattttcc
tccagccgaagtggaagtcaagtgcgggtcgtgaacaacgacatttatacgagaatggac
atggctgtactgaacgcaggagctcagccaccaggtacaaattactgcctgaattctgag
tgcaagtatctctgcttacctgaagcttatgactcttccgaccctcgtaattacacttgc
tcgtgcccggattcttatgttccagtggaagacgattcaaatgactgtaaaccaataatt
gatcctgttcaacgaatgaattcccgacaatcaaaaataaccacctccccctcaactgtc
cgtctttcacaaagcactcagacaacttcgaccacctcaactaaacagactagtacttca
gtgacaacaggggcagtcacaggacaatattctggcaacagtcaaggaatgtcatcaggg
acaaagattgtgcttataattggtattatagcacttcttgggtttattgtaaccataacc
tggtgtgtcataagattgagaaagaagcattctgctcgtaggagcatgaactttaacaat
ccaatctatagaaaagtaaccggatctgtggcttcaaccaactcttctataatcgataaa
aaaagcaagtccagcattagtgaaagctcaggattaacagatccaagtccaggaaccagt
tctggtgatgtcagtaattacttagaagatgaagaagaaggaaccgcgggattgatcaat
aatgaggaagttccagaaggaagtaatccttctattagttga
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