Styela clava (leathery sea squirt): 120336589
Help
Entry
120336589 CDS
T07291
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120336589
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120336589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
cEGF
Ldl_recept_b
EGF_CA
FXa_inhibition
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
120336589
NCBI-ProteinID:
XP_039260238
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MDGMYHEHFLICMLILFCWLEPTESKSPICDAAHNLFQCNTTSQCVTLTQRCDFRYDCDD
RSDELGCVRPSCNTTTQYTCANGKCIHSNWICDGENDCVDRSDETDELCSGDCKEGYFRC
RGSKACMPNSYKCDGDADCTGGEDEENCPARECRDDEFQCSNKQQCIDIDYRCDGVNECR
DRSDEVGCTDIICKDNQFTCADKTHCIDEDWKCDGISDCRDESDEQECENENRKCLPQYF
TCKSGTIPCIPLSWKCDGNKECSDGSDELNCDNIKDRCPFGESHCANRRQCISKRKFCDG
IWDCVDKSDESDCAGKKPAKSPQSCPLETHYRCPGDAGKCIPAKRLCDSIKDCPGGEDEK
QGPHFCNYNECTDATYSNCSHICIDMRVGFKCECRKGYKLAKDKHTCEDIDECIRGISNP
CQEFCFNTNGSHKCSCYEGFTLLPNGECKPNDEKHDVSFIVSGIEDIRKITLDWHRGHKV
VVPNIPAVAVRFLALDIRNGFVYWSDPKNEAISRYKISTLDSLKASPPKPEILVRSPTIK
SPGRIALDWVHELLFWVDSDRESISVSKLDGTMSKTLYRFPNTIVAGFAVHPKYGYIYMG
CILNSGKGEGVIRRCGMNGNKTSCVSIVTRQVKAVYDIAIDYDQDIVYWTDPVLELLAGS
RLDGEYRQNLIYDEAYSPLSLAVFNGRIYWIDKERHYLFSSSRSGSQVRVVNNDIYTRMD
MAVLNAGAQPPGTNYCLNSECKYLCLPEAYDSSDPRNYTCSCPDSYVPVEDDSNDCKPII
DPVQRMNSRQSKITTSPSNVPLSQSTLTTLTTSTKQTTTSVTTGAVTGQYSGNSQGMSSG
TKIVLIIGIIALLGFIVTITWCVIKLRKKHSARRSMNFNNPIYRKVTGSVASTNSSIIGL
TDPSPGTSSGDVSNYLEDEEEGTAGLINNEEVPEGSNPSIS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatgtatcatgaacattttctcatttgtatgttgattttgttctgttggcta
gaaccaacagaatcaaaatctcctatatgtgatgcagcacacaatctatttcaatgcaat
acaacatcacaatgcgtcactcttactcaaagatgcgattttaggtatgattgcgacgat
aggtcagacgaactaggatgtgttcgcccatcatgtaacactacaacacaatatacttgt
gcgaatgggaaatgtattcacagtaactggatatgcgacggagagaacgattgcgttgat
agatctgatgaaactgacgaactttgttctggggattgcaaggagggttatttccgatgt
cgagggtcgaaagcttgcatgccaaattcctataaatgtgatggagacgcggactgcact
ggaggagaggatgaagagaattgccccgcgcgagaatgcagggatgatgaattccaatgt
tcaaataagcaacaatgtatagatattgactatcgctgtgatggtgtgaatgaatgtaga
gatagatctgatgaagtaggatgcactgatattatatgtaaagataatcaattcacctgt
gctgataagactcattgcatagatgaggattggaaatgtgacggaatctctgattgcaga
gatgaaagtgatgaacaagaatgtgagaatgaaaatagaaagtgtctcccacaatacttc
acttgcaaatctggaacaataccttgcatacctttaagttggaaatgtgatggaaataag
gaatgcagtgatggatcagatgagttgaattgtgataatataaaggacagatgtccattt
ggggaatcacattgtgctaatcgtcgtcagtgcatcagcaaacgcaaattttgcgacggc
atttgggattgtgtggacaagtctgatgaatctgattgtgccggtaaaaagccagcaaag
tcgccacaatcttgtccacttgagacacattatagatgtccaggggacgctggcaaatgt
attcctgctaaaaggttgtgtgactctattaaggattgtcctgggggagaagacgaaaaa
caaggcccgcacttttgcaattataatgaatgcaccgatgccacttattccaattgctca
cacatatgcattgatatgagagttggttttaaatgtgaatgtagaaaaggatacaaattg
gcaaaagacaagcacacttgtgaagatatcgatgaatgcattcgaggtatttcgaatccc
tgtcaggaattttgttttaacacaaatggctcgcacaaatgttcttgctatgaaggcttc
actcttttgcctaatggtgaatgtaaacctaatgatgaaaaacatgacgtctcgtttatt
gttagtgggatagaagatataaggaaaattactttagattggcatcgaggtcataaagtt
gttgttcctaatatccctgctgttgctgttcgttttttagccctcgatattagaaatggc
tttgtttactggtcggatcccaagaatgaggccatttcaaggtataaaatatcgacatta
gatagcttgaaagcatcgccaccgaagccagaaatattggtccgttctccgacaatcaaa
tctcctggtcgtattgccctcgattgggttcatgagctattattttgggtcgattctgac
agagaatcaatatctgtgtcaaaattagacggaacgatgtctaaaactttgtataggttt
cctaatacgatagtggccggatttgctgtccatcctaagtatgggtatatatacatggga
tgcatcttaaactcagggaaaggtgaaggcgtgatacgtagatgtggaatgaatgggaac
aagacttcttgtgtgtcaattgtaacgaggcaggtcaaggcagtatatgacattgctatt
gattatgatcaagatatcgtatattggactgatcctgtactcgaattattagcgggaagc
cgactggatggtgaatacagacaaaatctgatctacgatgaagcctattctccattatct
cttgctgtattcaatggaagaatatactggatagacaaggagcgacactatttattctcc
tccagtcgaagtggaagtcaagtgcgggtcgtgaacaacgacatttatacgagaatggac
atggctgtactgaacgcaggagctcagccaccaggtacaaattactgcctgaattctgag
tgcaagtatctctgcttacctgaagcttatgactcttccgaccctcgtaattacacttgc
tcgtgcccggattcttatgttccagtggaagacgattcaaatgactgcaaaccaataatt
gatcctgttcaacgaatgaattcccgacaatcaaaaataaccacctccccctcaaatgtc
cctctttcacaaagcactctaacaactttgaccacctcaactaaacagacgactacttcg
gtcacaaccggggcagtcacaggacaatattctggcaacagtcaaggaatgtcatcaggg
acaaagattgtgcttataattggtattatagcacttcttgggtttattgtaaccataacc
tggtgtgtcataaaattgagaaagaagcattctgctcgtaggagcatgaactttaacaat
ccaatctatagaaaagtaaccggatctgtggcttcaaccaactcttctataatcggatta
acagatccaagtccaggaaccagttctggtgatgtcagtaattacttagaagatgaagaa
gaaggaaccgcgggattgatcaataatgaggaagttccagaaggaagtaatccttctatt
agttga
DBGET
integrated database retrieval system
