Styela clava (leathery sea squirt): 120336680
Help
Entry
120336680 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2-like isoform X1
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120336680
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120336680
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120336680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
SWIM
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_16
ZZ
RINGv
zf-ANAPC11
zf-UBR
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120336680
NCBI-ProteinID:
XP_039260343
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MLRQTKWQLEASDAVSWHQDEALNSTIFLLREMGPTSFLLKEEEEDMKLKVNIGDPHSCT
CDVFKRERNPCKHICWLILKKFKWPRTNELSYQHGLVEREINQLLQGPKKVKKEPPKGNK
DIGTSEKGTAQQRAISKLDVCPICQEELLDIHLPVTYCRYGCGNSVHIKCMKIWAEHQRQ
SSKDDEIRCPMCREIFGSFYKLLEELRNASGDDIEAYRLDVHFSISCNGCQMCPIKGKCY
KCTTCSSFYLCNTCFHGNKHRHHSFEFRLKRTNRWRPAKSRLQTDRELAIINDLSTREIT
DNDYDLLLQLDSSSGDTAPVDLCGLPEHVINTLPMMKVRPGAKLLVPGKQCRICLRSYEV
GEYVRKLPECKHIFHRECIDDWLSEDHRRCPIDNRLVVGMHRRQQSATSTSRQRSRQQDI
EATDMSTELMIPGIGIAKLQNMQNQNDRRYNADARNASNIDNRTLSTATNYQSSSSVNPV
GITIEDVVSGCHTLSLSRKAELNHRSRHLSLPPQNPLHVRQRAKSRSNHAFTPNGIAKGS
VVRSRNRSFERKTAPHSSQVDLWLTGNSPLSGTDLQSIRPMTFDDDLP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgacaaactaaatggcaattggaagcatctgatgctgtaagttggcatcaagac
gaagctttgaattcaactatatttttactaagagaaatgggaccaaccagttttttgttg
aaagaagaagaagaagatatgaaactaaaggttaacattggagatccacacagttgtaca
tgcgatgttttcaagagagaaagaaacccatgcaagcatatatgctggttaattttgaag
aaattcaagtggccaagaacaaatgaattatcatatcaacatggcctggtagaaagagaa
atcaatcaattgctgcaaggtccaaaaaaggtgaagaaagagccacccaagggaaataaa
gatataggtacttcagaaaaaggaactgcacaacaacgagctatttcaaaattggatgtt
tgtcccatatgtcaagaagaattattggatattcatttgcctgtaacatattgcagatat
ggttgcggaaacagtgttcatatcaaatgcatgaagatttgggcagaacatcaacgtcaa
tcatctaaagatgatgaaattagatgtccaatgtgtagagaaatttttggaagcttttat
aaattgcttgaagaacttcggaatgcttctggcgatgatattgaagcatacagactggat
gttcatttttcaatttcttgtaatggatgtcaaatgtgtcccataaaaggtaaatgctac
aagtgcacaacatgttcttccttctatttatgcaatacctgcttccacggtaacaaacat
aggcatcattcatttgaatttcgtctaaaaagaacaaatcgttggcgccctgcaaagtct
cgacttcaaacagatcgggaactcgctattattaatgatttgtccactcgtgaaattaca
gacaatgattacgatttattactgcaattggacagctcaagtggagacacagctccagtt
gatttgtgtggattacctgaacatgtcatcaacactcttccaatgatgaaagtcagacct
ggagctaaactacttgtgcctggcaagcaatgtagaatatgtttacgatcatacgaggtt
ggcgaatatgtgagaaaattaccagagtgtaaacatatatttcatcgagaatgcattgat
gattggctttcagaagatcacaggagatgtccaattgataacagactggtggtgggaatg
catcgtagacaacaaagtgcaacttcaacgagtagacagagaagcaggcaacaagatatt
gaagcaactgatatgtctacagaattaatgattcctggaataggaattgcaaaattacag
aatatgcaaaatcagaatgacaggaggtataatgctgatgcaaggaatgcaagcaacata
gacaaccgaacactttcaactgcaactaattatcagtcatcaagttctgtaaaccctgtt
ggaatcacaattgaagatgttgtgagtggctgtcacacacttagtttaagcagaaaggcc
gagttaaaccatagatcacgtcacttatctcttcctcctcaaaacccgttgcatgtgaga
caacgagctaaaagtcgatcaaatcatgcatttactccaaatggaattgcaaaaggatca
gttgtccgatctagaaaccgatcatttgaacggaagacagctccacattcttcccaagta
gatctatggttgacgggaaattctcctttgtccggaacggatttacaaagtattcgaccc
atgacatttgatgatgacctgccatag
DBGET
integrated database retrieval system
