Styela clava (leathery sea squirt): 120336770
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Entry
120336770 CDS
T07291
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120336770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120336770
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120336770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
120336770
NCBI-ProteinID:
XP_039260464
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MSSEEENDAACDLDQRYMELCLAVNMDKPTMEQALQDFQNTSKNYTLEGDGLHWLVCALY
VKSRESIVPTVSGMNSKGNFVSLNKLLKAAGLSFVCFLRKMEKWLEMNTSIASDFRERIA
SLERSFCVNTPIFKKFLPLFQTVFLDPFDPQNTPTKHKSRRPRKVQCTTSDIFKFCWTTF
IHAKATQYRAITEDLVSSFQLLLSVINFCFANALQCNHRAKLLNPDFAGLPENWDKPDFK
PPTTPPDIIGLLVDNQAASGLSRMQADNFSFAARVINRHQFTSYVRSLLNPEGDVLSGDA
DTLSNLFLPQNFEKNKKAIDMCYEEYILTEGDFDERIFLCDDVEQELGTPIKQRKLELKA
QSVAVDNMSPIKISIQRPESDITIKPNTPLTNRMLLAGRELGNTTPVSRAVQSVAKLQLL
LHGQEFEFSAIFIKEILHNSSEMSDSISSRLQDMGVKFLDAYCKPYKDQPGGARDFGETR
LHMIKTLYFKSLQNIIWQEKKRMEGRKNGGSCEQLLTRDDFHLLLFGCCVEVVLFSYHST
RVFPWVLEATNTKAYYFYKVIELMIRAEEGLSREVVKHLNHIEEKILESMAWQSDSPLWE
AIENLSNVPSCEEVNYPHQVTPVAGIAATMKVHPRVRQVADQTNALSNSNKSESNFISNT
MVHDRFSSPVPGSVKRCLFQSDEGNIINAAVRTPTVVENADNQKPKRTGSLALFFRKVYH
MAGIRVKDLCDKLNIPVGLQAKVWTTFEQSLIRCTFLMRNRHMDQLIMCAVYVLAKVTQH
DQSFQEIMRCYRSQPQASSHVYRNVLIHEANPDDENESDIEVRDDLIQFYNKIYVPALKD
FVKKFSTSSNANMEAPPLSPMPTSRCVVKSPRKVVGSYQIYISPHKICGETSLMSTSPAL
EYSFQRSPSTNLRDFNAMISRHKPIQRKRTLDFSKVDDFNTDAGNHALASKLQKVHDDRT
KLK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgaggaagaaaatgatgcggcctgtgacctcgaccaacggtacatggagctc
tgccttgctgttaatatggacaagccgaccatggagcaggcacttcaagattttcaaaat
acaagcaaaaactatacacttgagggtgacggtctacactggcttgtatgtgcactttat
gtgaaaagtagagaaagcattgtcccaactgtgtcaggaatgaatagtaaaggcaatttc
gtttccttgaataagttgctgaaagctgcaggcctcagttttgtatgctttctgcgcaaa
atggaaaagtggttagaaatgaatacaagcatcgcatctgattttcgtgagcgaattgct
tccctggaaagaagcttttgtgtcaatacaccaatcttcaaaaaatttcttcctttgttc
caaactgtgttcttagatccatttgaccctcaaaacactccgactaaacataaaagtagg
agacctagaaaggttcaatgcactacaagtgatatcttcaaattttgttggacaactttc
attcatgccaaagccactcaatacagagcaatcactgaagaccttgtgagttctttccaa
cttctactcagtgttattaatttctgctttgcaaatgccctgcagtgtaatcatagggcc
aaacttctgaaccctgatttcgctggtttgcctgagaattgggataaaccagatttcaaa
ccacccactacaccacctgatattattggattgttagtagataatcaagcagcttctggt
ctttcgagaatgcaagctgataacttttcatttgcggctcgggtaattaacagacatcag
tttacttcatatgttcgatcccttcttaatcctgaaggggatgttctgtcaggtgacgca
gacacattgtcgaacttgtttttgccgcaaaattttgaaaagaataaaaaggcaattgac
atgtgttatgaggagtatattctaactgaaggagattttgatgaacgtatatttttgtgc
gatgatgttgagcaggagctcggaactccaataaaacaaagaaagcttgaattgaaagca
caatcagtggctgttgataacatgtcgcctatcaaaatttctatacaaagaccagaaagt
gatattactatcaagccaaatactcccctaacgaatagaatgcttttagctggtcgagaa
ttaggtaacactacaccagtgtctagagcggtacaaagtgttgctaaacttcaattattg
ttgcatggtcaagaatttgagttttctgccattttcatcaaggagatcctccacaattct
tcagagatgtcagattccatttctagtcgattgcaggatatgggtgtaaaatttctggat
gcttattgcaaaccttataaggatcagccaggtggtgccagagattttggtgagacaaga
cttcatatgataaaaaccctctattttaaatcacttcaaaatattatttggcaagaaaaa
aagcgcatggaaggaagaaagaatggtggaagctgtgagcaactactaacacgtgatgat
ttccatttacttttgtttggttgttgtgtggaggttgttctcttttcttatcattcaact
cgagtgttcccatgggttctcgaggccactaacaccaaagcatattacttttacaaagtt
attgagttgatgattcgtgcagaagaaggtctttcaagagaagttgtcaaacatctgaat
catatagaagagaaaatattagaaagcatggcgtggcaaagtgattctcctctttgggaa
gcaattgaaaatttatctaatgtcccatcatgtgaagaagtaaactatccccatcaagta
actcctgttgcaggcatcgctgccacaatgaaggttcatcctcgtgttcgtcaagtagct
gatcaaactaacgcattatctaattccaataaatcagagagcaatttcatatctaataca
atggtacatgacagatttagctcaccagttccagggagcgtaaaaagatgtttgttccag
tctgatgagggaaatataataaacgctgctgttcgtactccaactgtagtagaaaatgca
gataatcaaaagccgaagcgcactggttctcttgccctcttctttagaaaagtctatcat
atggccggtatcagagtaaaggatttatgtgacaaattaaatattccagtcggattacaa
gcgaaagtgtggacaacatttgaacaatcacttatacggtgcacttttctcatgcgtaat
cgtcacatggaccaacttatcatgtgtgctgtatatgtgcttgccaaagtcacacaacat
gaccaatcgttccaggagataatgaggtgttatcgtagtcagccacaagctagcagtcac
gtttatcgaaatgttcttattcacgaggcaaacccagatgatgaaaacgaatctgatata
gaagttcgggatgatttaattcaattctacaataagatttatgttcctgccttgaaagat
tttgttaaaaaatttagtacatcttccaatgccaacatggaagctcctccgctttctcca
atgccaacttctcgatgtgttgtcaaatctcctagaaaagttgtcgggagttatcaaata
tatatctcccctcacaagatatgtggtgagacatctctaatgtcaacaagtcctgctttg
gagtatagctttcaacgaagcccatcaacaaatcttcgtgatttcaatgcaatgataagt
cgacataagccgattcaacgcaagcgtactttggatttctcaaaggttgatgattttaac
accgatgcgggaaaccacgctcttgcatccaaattgcagaaggttcacgatgatcgaaca
aagctcaaatga
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