Styela clava (leathery sea squirt): 120336792
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Entry
120336792 CDS
T07291
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120336792
04121 Ubiquitin system [BR:
sclv04121
]
120336792
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120336792
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120336792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
bZIP_C
SKA2
Motif
Other DBs
NCBI-GeneID:
120336792
NCBI-ProteinID:
XP_039260490
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All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MRPLSTIEGTHFKRLMGHVAPNYSLPSRRTITRRVEEEYCEKKMELKRVLENIKHMSLTF
DAWTSVKMEAYLGITAHYVDAKFNLCSCVLSVKPLDDRHTAKNICEWVEEVLNDFGVSPH
AVCAAVSDNGSNMKAAKDIFHEKFGWASVACAAHTLQLCLNKGLGINGIEKPLAAARRLV
QHFKRSELATSALGKKCEEMKLTSKRLIMDVSTRWNSTYNMLVRLQELQWPILAILGNKN
ITNATKASALTIKPGDWEIFKQLIPVLEPFAEATDLLGGEKYVSISIKNPYIKGLKKHLS
REKDDELLVIRQFRQKVKGEMEERFPIDLNDISSKAMALDPRYKLQGLRTVESLQLKSAI
ELELTVLFEQTVVEKAEPSSSSVQQSTSIISLAFESSESDDSADTEVPVVANEVNKFFSS
KVLSECSNPLTWWKEQNANYPNLSKLVGKYMCVTATSTPSERLFSAAGNTATELRSSLTG
SHVEALVFLKCNSDI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgctcagcacaatagaaggaacacatttcaagcgcttaatgggacatgttgca
ccaaattattcactgccatccaggaggaccataacacgacgtgtagaggaagaatattgt
gaaaaaaagatggagcttaagagagttcttgaaaacattaagcatatgagcttgactttc
gatgcttggactagtgtgaaaatggaagcatatttgggcattacggcccattatgttgat
gccaaatttaatctgtgttcatgtgtgttaagtgtgaaacctttggatgatagacatact
gcaaaaaatatttgtgagtgggtagaagaagttctcaatgactttggtgttagtcctcac
gctgtctgtgcagcagtaagcgataatggatctaatatgaaggcagccaaagatattttt
catgaaaaatttggttgggctagtgttgcttgtgcagcgcacactctccaactttgttta
aacaaaggattgggaataaacggcatagaaaaacctcttgcagcagctcgacgactagtg
caacattttaagagaagtgaattggcgaccagtgcactggggaaaaagtgtgaggaaatg
aagcttacctccaaaagactcataatggatgtatccacaaggtggaacagtacttacaac
atgcttgtaaggttgcaggaattgcaatggccaattttggctatacttggaaataaaaat
atcacaaatgccaccaaagcctccgctcttacaatcaagcctggggactgggagattttc
aagcagttgattccagtacttgaaccttttgcagaggctactgatcttttaggaggcgaa
aaatatgtatcgatatcgataaagaatccatacatcaagggattgaaaaaacatctgtca
cgcgagaaagatgatgaacttttggtaatccggcagttcagacaaaaagtaaaaggcgaa
atggaggagcgatttcctattgatcttaacgatatcagctcgaaggcaatggctctggat
cccagatataaactgcagggacttcgtactgtggagtcacttcagctcaaaagtgcaatc
gaattggaactcacagtcttatttgaacaaacagttgttgaaaaagctgaaccttcatct
tcttcagttcagcaatcgacatccatcataagccttgccttcgaatcatcagagtccgat
gacagtgcagatactgaggtcccagtggttgccaatgaagtgaacaaattttttagttcc
aaagtactttctgaatgttcaaaccccctcacttggtggaaagagcaaaacgctaattat
ccaaacttgagcaagcttgttggcaaatatatgtgtgtaacagcaacatcaaccccaagt
gagcgattattttctgcagctggaaacactgccactgagctcagatcaagcctcaccgga
tcacatgtggaagctcttgtatttttaaaatgcaattctgacatatga
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