Styela clava (leathery sea squirt): 120336858
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Entry
120336858 CDS
T07291
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
sclv03015
mRNA surveillance pathway
sclv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120336858
09122 Translation
03013 Nucleocytoplasmic transport
120336858
03015 mRNA surveillance pathway
120336858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120336858
03041 Spliceosome [BR:
sclv03041
]
120336858
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120336858
Spliceosome [BR:
sclv03041
]
Complex C
Other components
EJC/TREX
120336858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
120336858
NCBI-ProteinID:
XP_039260558
LinkDB
All DBs
Position
Unknown
AA seq
162 aa
AA seq
DB search
MADVLDLHESGEEFAADEEGDVGIERLKDRAKRRKGRGIGDSEKRTEIKYEAMESDQDGP
GPQRSVEGWILFVTGVHEEATEDDMFDKFGEYGELKNLHLNLDRRTGYLKGYALVEFETF
KEAQAALDALNGSDLLGQTMSVDWAFVKPSQKDRRDRRHRRR
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtgctagatctacatgaaagtggagaggaattcgccgcagacgaggaagga
gatgtcggaattgaaagattgaaagatcgtgcgaagcgcagaaaaggacgtggaattggg
gattctgaaaaaagaactgaaatcaagtatgaagcaatggaaagtgatcaagatgggcct
ggacctcaacgatcagttgaaggctggattttattcgttactggcgtgcacgaggaagca
acggaagacgacatgttcgataaatttggagaatatggagaattaaaaaatttacatcta
aatcttgacagaagaacgggatatttaaaaggatatgccctcgtggaattcgagactttt
aaagaagcacaggctgctcttgatgcattgaatgggagtgatttactaggccaaacgatg
tcagtagattgggcttttgttaaaccgtcccaaaaagataggcgggaccgtaggcatcgt
cgtcgttga
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