Styela clava (leathery sea squirt): 120337265
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Entry
120337265 CDS
T07291
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120337265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120337265
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
120337265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
120337265
NCBI-ProteinID:
XP_039260932
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MDQDFEKRLLKQQNGQSLLSPACSPSVSPFANRHQQRSLPSSPGGVTPTKDRYGDRFIPS
RAGARWHIDFNLISENTVSRNKNTKNQQQQQQQSPTTNRKTKDANENGKDNLMYQCLLKN
ELLGAEIERIKDSQSEDRRIMGSPCSEKKNLFKYSVRMKRADSTESSPYSLSPVGTKSQR
LLRSPRKPMRKISKIPFKVLDAPELQDDFYLNLVDWSSSNILSVGLGACVYLWSAHTSQV
TRLCDLSSDSDSVTSVNWNDRGNLVAVGTHKGHVQVWDAAANKRIVQLQGHTARVGALAW
NGDQLSSGSRDRLILQRDVRSSLSGSSSGISDRKLTGHKQEVCGLKWSPDRQHLASGGND
NKLLVWSASSGGNNSNNIQPVHTYSEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNT
LTQQPLQCVDTGSQVCNLAWSKHANELVSTHGYSQNQILLWKYPSLTQVAKLTGHSYRVL
YLATSPDGEAIVTGAGDETLRFWNVFSKTRSNKESTSVLNLFTRIR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagactttgaaaaacgacttttaaaacaacaaaatggacaatccttgttgtct
ccagcctgctcaccttctgtctctccatttgctaatcgtcatcaacagcgatcactgccg
tcatcaccgggtggtgtgactccaacaaaagatcgttacggagacagattcatcccgagc
agagctggcgcaagatggcatattgactttaatttgatttctgaaaatacagtttcgcgg
aataaaaatactaaaaatcaacaacagcaacaacaacaatctccaacaacaaatcgaaaa
accaaagatgccaatgagaatggaaaagataacctcatgtatcagtgtttactgaagaat
gaactacttggtgcagaaattgaacgaataaaagatagtcaatcagaagatagaagaatt
atggggagcccttgttcagaaaagaaaaatttatttaaatattctgtcagaatgaaaagg
gcggactctacagaatcatcaccatattcgttatcacctgtaggcactaaaagtcaaagg
ctacttcgatcacctcgaaaaccaatgagaaaaatttccaaaattccatttaaagtttta
gacgcccctgaacttcaagatgatttttatcttaacctcgtagattggtcgtcgtctaat
attttaagtgtcggattgggagcgtgtgtatatttatggagtgcacatacaagtcaagta
acaagattatgtgatctttcctcggacagtgattcagtaacatcagtcaattggaatgac
aggggtaatcttgttgccgtgggaacacacaagggtcatgttcaagtttgggatgcagca
gctaacaagcgcattgtgcagcttcaaggccatactgctcgtgttggagctctggcatgg
aacggtgatcagttgtcttcgggaagccgagacagacttatacttcaacgtgatgtaaga
tcatcgctttcgggttcatcgagtggaatttctgatagaaaattaacaggacataagcaa
gaggtttgtggtctgaagtggtcacctgatagacagcatttagcatctggtggtaatgac
aacaaactattagtttggtcagcaagttcaggaggcaataattcaaacaatattcaacca
gtgcatacctattctgagcatttagcggcagtcaaagctatcgcttggtcacctcatcag
catggtttactagcatccggtggtggtactgcagacaggtgtattcgcttctggaacacc
ttgacccaacaacctctgcagtgtgtggatactggatctcaagtctgcaatcttgcatgg
tccaaacatgctaacgaacttgtatcaactcatggttatagtcaaaatcaaattttgttg
tggaagtatccgtcgttaacccaagttgctaaattaacaggacattcttacagagtttta
tatttagcaacctcaccagatggagaagctattgtaacaggagccggtgacgaaacatta
agattttggaatgttttctcaaagacgaggtctaacaaagaatctacttcagttctcaat
ttattcactcgcattcggtag
DBGET
integrated database retrieval system