Styela clava (leathery sea squirt): 120337273
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Entry
120337273 CDS
T07291
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120337273
04121 Ubiquitin system [BR:
sclv04121
]
120337273
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120337273
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
120337273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
120337273
NCBI-ProteinID:
XP_039260940
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MSRRTGFYGGSPGPPIDERSLTHHVPQLYGQITPGGNHVYGGPGIPYDPPPQEMNGNDSV
YYTHHVGGNVMPSNYADFRSVHMNTYPYVPRMGQFYYGGGPAPYYYTAPPQFVDDNFAHG
QQYTEWSSNDFSTPNDMSPPESTTVEDNATAAEARSSSNESAGKSRRFSRQRNVKDGDGN
RPRSASNKTQFKNVPKHEIRFSHQKRQLDTAPISEQKSVIKIDDDDSAEASNTEDSRFSI
IRSIGKREIDTGYDEPQKPNRGPRQNNKKEKPRIMKKKIDKPVVIESSESQLNLLLDQLT
CGTYECMVCCDRVKQQHAIWNCSKCYHVFHMGCIKKWARSPSAHVEGEGWRCPGCQNITK
KFPSTYNCYCGKVKEPEWNRRETPHSCGEVCGKKRSNNDTCTHPCNILCHPGPCPPCPAS
VIKPCLCGKMTRKVRCSQQKPLTCTDECGKLKNCDIHKCDVICHAGDCNDCDVLVEQECF
CSKNKREVLCGSDQFKITRTKGRKQVYSCEGICEKTLLCGHHNCAEVCHEGDCKLCPLRP
SAVTTCPCTQTKISDLVDEDGNKAVRTQCIDPIPLCDKTCNKPLRCGGDSIHTCKLKCHT
GPCSPCTDDISAIHCRCGKSEDEVPCSEIPEKLYICDRRCNKKRKCGRHKCGKTCCIDTE
HLCTQICGRKLECKLHRCEEPCHRGNCHTCYNVSFEDLSCHCGAEVMFAPIPCGTKPPEC
LRECMRVHSCFHPVKHNCHNEEKCPPCVVLVKKPCNCGRIIRSNIPCHQENVSCGAPCKK
VLPCGHHCLKPCHQGPCMEENDKCTQPCSIMRVECIHPCAMFCHQGQPCPPSQCKAMVTL
KCSCGNREMQVECSEGGATYQRISSEAFARQQQMSKGTVDISNLFNSGGKQKVLPCNEQC
SAIERNRRLAEALNIDEQASAVVEQHIYSSFLQMWAKQDPMFVQGIEQELTNIIEAVAWL
DKTKRSHTFPSMRREKRQVIHELAEAFDCKSVSIDEEPNRSVLVTAVRGVSKIPRLLLSD
SVKKKEPEPAFRRQTESQSKTSNTVDGKKRLLSSMKLVSLTSASPSSDDKTSDSSHHIKR
PASIPRMPSYTSSVAKQSTTSVSGKFSAEHTARVGYSDGKLSNTTPSNSRSNAYRPASYA
RTSQSTRTPSGSAASGGKNEPEIDYFDMTG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcgtaccggtttttacggaggctcacctggcccacctatcgacgaaagatca
ttaacgcatcatgtaccacagttgtatggtcagattacaccaggaggtaaccatgtctat
ggtggtcctggtataccatatgatcctccaccccaagagatgaatggaaatgattctgtt
tattatacccatcatgtagggggaaatgtaatgcccagtaattatgctgatttcagaagt
gttcatatgaatacttatccatatgtcccgagaatgggtcaattttattatgggggtggc
ccggccccttattattatacagcccctcctcaatttgttgatgacaattttgcgcacggc
caacagtacacagaatggtcttccaatgatttttcgactccaaacgacatgtcgccacca
gaatctaccactgtggaagacaacgctactgctgctgaagctcggtcatctagtaacgaa
agcgctgggaaatcgcgacgatttagcagacaacgcaatgttaaagatggtgatggaaat
agaccccgtagtgcgtcaaataaaacacaattcaaaaatgtacctaaacatgaaataaga
tttagtcatcagaaacgacaattagacactgctccaatatccgaacaaaagtctgttata
aaaattgatgacgatgacagtgctgaggcttccaatacagaagattcaagattttctata
attcgaagtattggcaagagagagattgacactggttatgatgaaccacaaaaaccgaat
agaggaccaagacaaaacaataaaaaagagaagccgagaatcatgaagaagaaaattgac
aagcctgtggtaattgaatcatcagaatctcaacttaatcttttattggaccaacttaca
tgtggaacttatgaatgcatggtctgttgcgatcgtgtcaaacaacaacacgcaatatgg
aattgcagtaaatgttatcatgtttttcatatggggtgcatcaaaaaatgggcccggtcc
ccctccgctcatgttgaaggtgaagggtggcgatgcccaggttgccaaaacattaccaag
aaattcccaagcacctataactgctattgtggaaaagtaaaagaaccagagtggaatcgc
agagaaactcctcactcatgtggagaagtttgtggcaaaaagcgaagcaacaatgataca
tgtactcatccatgtaacatactctgccatccaggaccgtgtcctccatgtccagccagt
gtaattaagccctgtttatgtgggaagatgacaagaaaagtaaggtgcagtcaacaaaag
ccattgacatgtacagatgaatgcgggaaattgaaaaattgtgacattcacaaatgtgat
gttatatgtcatgctggtgactgcaatgactgtgacgtacttgtggaacaagaatgcttt
tgtagtaaaaataaaagggaagttttgtgtggttccgatcagtttaaaattactcgtacc
aaaggcagaaagcaggtttactcttgtgaaggtatatgtgagaaaacacttttgtgtggt
catcacaattgtgctgaagtttgccacgaaggagactgcaagctgtgtcctctacgtcct
agtgctgtaacaacgtgtccatgcactcaaacaaagatttctgatttagttgatgaagat
ggtaataaagctgttcgaacgcagtgtattgatcctattcctctatgcgataaaacatgt
aataaaccactgcgatgtggtggtgacagcattcatacatgtaaacttaaatgtcacact
ggtccgtgttctccatgtacggacgatatatctgccattcattgtcgatgtgggaaatca
gaagatgaagtaccgtgttctgaaataccagaaaaattgtatatttgtgatcgacgatgt
aataaaaaacgcaaatgtggtcgacataagtgcggaaaaacttgttgtatcgatacagaa
cacttgtgtacacagatatgtggaagaaaacttgaatgtaaattacatcgatgtgaggaa
ccttgtcacagagggaattgccacacctgttataatgttagttttgaagatttgagttgt
cattgcggagctgaagtcatgtttgcgccaattccctgcggcacgaaaccacctgaatgc
ttgagagaatgcatgagagttcattcttgttttcatcctgttaaacacaattgtcacaat
gaagaaaaatgtccaccttgtgttgttttggtcaagaaaccttgtaattgtggaaggata
attcgaagtaacattccatgtcaccaagagaatgtttcatgtggtgcaccttgcaaaaaa
gtactcccttgtggtcatcactgcctgaaaccatgccatcaaggcccatgtatggaggaa
aatgacaaatgtactcaaccttgtagcattatgcgtgttgaatgcattcatccctgtgca
atgttttgtcaccaaggtcagccttgtcctccttcacaatgtaaggctatggtcactctt
aaatgcagctgcggaaatcgcgaaatgcaggtagaatgctcagagggaggagcgacttat
caacggatatcatcagaggcattcgcaaggcaacaacaaatgagcaaaggcactgttgac
attagcaatctctttaacagcggaggaaagcagaaagtccttccgtgtaatgaacaatgc
agtgctatcgaacgaaaccgtagattagcagaagccctgaatattgatgaacaggcttca
gctgtagtggaacaacatatctattcatcttttctacagatgtgggccaaacaagatcca
atgtttgttcaaggcatagaacaagagttaacaaatatcattgaggccgtagcttggttg
gataaaactaaacgttctcacacatttccatctatgagaagagagaaacgacaagttatt
cacgaacttgctgaagcttttgattgtaaatctgtcagcattgatgaagagccaaatcgc
agcgttcttgttaccgctgttcgaggtgtgagcaaaattccacgtcttctcttgagtgac
agcgtgaaaaagaaagaacctgaaccagcatttcgaaggcaaactgagagtcaaagtaag
acaagtaataccgttgatggcaaaaaaagacttctgagctccatgaaacttgtgtctttg
acatctgcatccccttcatcagacgataaaacaagtgattccagtcatcacataaaaaga
ccagcttccattcctcgtatgccgagttatacttcatcagttgccaaacagtctactacc
agcgtttctgggaaattctcagctgaacacactgctagagttggttattcagatggaaaa
ttgtcgaatactactccatccaacagccggagtaatgcatatagaccagcaagttacgct
cggaccagccaatcaacaagaacgccatctgggtcggcagcatctggaggcaaaaatgaa
ccagaaattgactattttgatatgactggttaa
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