Styela clava (leathery sea squirt): 120337376
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Entry
120337376 CDS
T07291
Name
(RefSeq) lariat debranching enzyme B-like
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120337376
03009 Ribosome biogenesis [BR:
sclv03009
]
120337376
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120337376
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
90S particles
RNase
120337376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
120337376
NCBI-ProteinID:
XP_039261068
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MHIAVEGCCHGELDKIYETMQYMERRDKIKIELLLCCGDFQSVRDEADLTCMACPDKYKS
MQTFWQYYNGIKKAPYLTIFIGGNHEASNHLQELPYGGWVAPNIFFMGYSNVVTYKGLRI
GGISGIFKYHDFNKGHFEKPPYDNTTKRSVYHIRSVEIFRMKLLNTPLDIMMSHDWPNGV
VDYGNVSELLRHKPFFEEDIRRNRLGSSPAMELLRHMKPTHWFSGHMHVKFSAVIPHNGP
GNNNKVTNFLALDKCLPRRQFLQVIDMKVPENCENQGLCYDPEWLAILKSTNDLVSVSRR
NVYIPQSSDDSMFVKHVVTSEKVDKMKNIFNNDFIIPNNFKRDISPLYDPRRHNRHKPIL
CKTSHQTTEFCAKLEINDPLMMAIAAEGGDLSLSFNSSSVLYDEDEEMPSTIVSSTSINE
DEIDLGSDDDADGDVNKNEIETTNKTNTELSISILSDKKKVNNGIKMDETEPESPLVLSS
LSSDDDSGNKTSSGSETNRGVMRLSLSLPAPVFGATSTPVRQSHGSKIDHIEPELSDTPI
GNLSPANISVDSDSCNSLSNEKLTPISFPKPLKPETSLAKNALLMSLKGKRLSDDIDSDM
SESSSGNTPSGTKKFKRRNASFYSSQSEDSGDNTT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcatattgcagtagagggatgctgtcatggagaattggacaaaatttatgaaacaatg
cagtacatggaacgacgagataagatcaaaatcgaactcttgctatgttgtggagatttt
caatctgttcgtgatgaagcagatctgacctgcatggcttgtcctgacaaatacaaatca
atgcaaactttctggcaatattacaacggcattaaaaaagctccttatttaactattttc
attggtggtaatcatgaggcatctaatcatctacaagaattgccttatggaggttgggtt
gcaccaaatatattctttatgggttattctaatgttgttacatacaaaggtttacgcatt
ggtggaatatctggcatttttaaatatcatgatttcaacaaaggtcattttgaaaaacca
ccgtatgacaacaccacaaaaagaagcgtttaccatatacgcagtgtcgaaattttccgt
atgaaacttttgaatactccattagatattatgatgtctcatgactggccaaatggagta
gtcgactatggaaacgtttctgaacttctcaggcacaaaccattctttgaagaagatatc
cgacgcaatcgccttggcagctcaccagcaatggagcttttgcggcacatgaaaccgacc
cactggttctctggacatatgcatgtcaaattttcagctgtaattccgcacaatggccct
ggaaataataacaaagttacaaactttctagctctcgataaatgtctaccaagacgtcag
tttcttcaagttattgatatgaaagtccctgaaaattgtgaaaatcagggtttgtgttat
gatcctgaatggttagccattttaaagtcgacaaatgaccttgtttctgtatcaagaagg
aatgtgtatattccgcaaagtagtgatgacagcatgtttgtgaaacatgtagtcacatct
gaaaaagtcgataagatgaaaaatatattcaacaacgattttatcattccgaataatttc
aagcgtgacatttcaccactttatgaccctcgtcgtcataaccgtcataaacctatttta
tgtaaaacgagtcatcaaacaacggagttctgtgctaagcttgagattaatgaccctttg
atgatggcaatagcagcagaaggtggtgacctcagtctcagttttaacagcagttcagta
ctatatgatgaagatgaagaaatgccaagtacaattgttagcagtacgtcaatcaacgaa
gatgaaattgacttgggttcagacgacgacgctgatggtgatgtgaataagaatgaaatt
gaaacaacgaacaaaacaaatactgaactttcaatttcaatcctttcggacaaaaaaaaa
gtgaataacggaatcaaaatggatgaaactgaaccagaaagtcctttagttttatcctct
ctttcaagtgatgatgatagtggaaataaaacgtcgtctggctctgaaacaaacagagga
gtaatgcgtctatcgcttagtttaccagctccagtttttggtgcaacttcgactcctgtg
agacaatcacatggatctaaaattgatcacattgaacctgagctaagtgatacgccgatt
ggaaatttatctcctgcaaatatctctgtagactctgattcttgtaattcattatcaaac
gaaaagctaacaccaatatctttcccgaaacctctaaaacctgaaacatcacttgcaaaa
aatgctttgctcatgtcattaaaaggaaaaagactgagcgatgacatcgattcagatatg
tccgagtcaagttctggaaatactccttcaggaacaaagaaattcaaacgtaggaacgcc
tcattttattcatctcaaagtgaagacagtggtgataatacaacctaa
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