Styela clava (leathery sea squirt): 120337388
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Entry
120337388 CDS
T07291
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120337388
04121 Ubiquitin system [BR:
sclv04121
]
120337388
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120337388
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120337388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
Motif
Other DBs
NCBI-GeneID:
120337388
NCBI-ProteinID:
XP_039261082
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MLPLWRNYGFHNSTSNMLKHMNGRHPFVKLQEDDIQSCSETCTSASKKSSNSNSSSISTG
SQNLSFSETETSRMKQTILPYRNLQHVTPMEAKRIDDGIVNMVVGDLRPINIVSGRYFQN
LVAMLAPPGYTIPSRQTITTKVEDLYREKKEVLMNELLNATYVALTTDAWTSIKQESYLC
VTAHILSQDFNINSFVLSTKQLDDKQTGENIAGWIQEIVSDFGVPFSKIVSITTDNGSNM
IAAVNLLKREHNLNAIRCAAHTLQLCLQRGFALRDIVDMLETARKIVNFFRRSASNRLCL
RKKYEEITGKPLLLDLIIDVSTRWNSTYEMLLRLNELKWHIRAVVSELREGNRRELSHLE
MKEHYWEIVQDLLPILQPFKVATAFLEGNNYITLSSLKPVLKGLVKKISVGNPNENTRIV
GFRNTVFGMLNSYFEICLKDDGSTIFDIAYVLDARYKTKSMKQDASRKVKNLLQFEVENI
YTSEIEQPAVQQSGMATELHERNNKSCIGNLINDGMDSSEESGGDVGELTREMEVSAEIS
KYLNDRYLGLSATQEEMLQWWKQNKKVYPNIAVVVQKYLCIPATSAASERAFSSAGLTVS
KLRSRLTGRHVNELNFLHCNRFLL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtggagaaactatggctttcacaacagtacttctaacatgctgaagcat
atgaatggccgtcatccttttgtaaaattgcaagaagatgacatccaaagttgcagtgaa
acgtgtacgagtgcatcgaagaagagttcaaattctaattccagcagcattagtaccggt
agccaaaatcttagtttctcagaaactgagacatcaagaatgaaacagacaatattgcct
tatcggaacttacaacacgttacacctatggaggctaaaagaattgatgatggcattgtc
aatatggttgttggtgatttacgtccaatcaacattgtttcaggcagatattttcaaaac
ttggtagctatgctagctccgccaggatacacaattccatccaggcaaacaataacaacc
aaagtagaagatctttacagagaaaagaaagaagttttaatgaatgaacttctcaatgcc
acatatgtggcactgacaacagatgcctggactagcataaagcaggaatcatatttgtgt
gtcaccgcacacattctttcccaggatttcaatataaattcatttgtactttcaacaaag
caacttgatgacaagcaaactggagaaaatatagcaggctggatacaagagattgtttct
gattttggtgttcctttctcaaaaattgtctcgataacaacggataatggttcgaatatg
attgcagctgttaacctattgaaaagagagcacaatctaaatgcaattcgatgtgccgct
cacaccctgcagttgtgcttacagaggggatttgccctgagggacattgtcgacatgttg
gaaacggccagaaaaattgtgaacttttttagacgatctgcatcaaacaggctgtgcctt
agaaaaaagtatgaggagataacagggaagccattattgttggacctaataatcgatgtg
tccaccaggtggaactctacttatgaaatgctcttgagactcaatgaactgaaatggcac
atccgtgcagtggtctctgaacttagagaaggtaatcgaagagaattatcacatcttgaa
atgaaggaacattactgggaaattgtgcaagatttattgccaattctacagccctttaag
gtagcaacagcatttttggaaggcaacaattatataaccttgtcttccctaaagccagta
cttaaagggttggtgaaaaagataagtgttggtaaccctaatgaaaatacaagaattgtt
gggtttcggaatacagtttttggcatgttgaactcatactttgaaatatgtctgaaagat
gacggaagtacaatatttgatattgcatatgtcttggatgcaagatacaaaacgaaatcc
atgaagcaagatgcatcgagaaaagtcaaaaatttgttgcaattcgaagtggaaaatatt
tacacatcagagatagaacaacctgcagtccagcagagtggaatggcaacagaactacac
gaaagaaataataaatcatgtattggaaatctaatcaacgacggtatggacagttctgaa
gagagtggcggcgatgttggtgaattgactagggagatggaggtttcagctgagatttct
aaatatttaaatgatagatatcttggcttatcagcaacccaagaagaaatgctgcagtgg
tggaaacaaaacaaaaaagtgtatccaaacatcgcagttgtcgtacagaagtacctctgc
atcccagcaacatccgctgcatccgaaagagcgtttagctcagcgggtcttaccgtctcc
aaattgagatcgagactcacaggaaggcatgtaaatgaactgaactttttacattgtaat
agatttttactatga
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