Styela clava (leathery sea squirt): 120337417
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Entry
120337417 CDS
T07291
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120337417
03015 mRNA surveillance pathway
120337417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120337417
03036 Chromosome and associated proteins [BR:
sclv03036
]
120337417
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120337417
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120337417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
120337417
NCBI-ProteinID:
XP_039261116
LinkDB
All DBs
Position
Unknown
AA seq
157 aa
AA seq
DB search
MPQAGSLEDRLRSVAQDAPAEEKPAPKPAIDREKTCPLLLRVFTCNGRHHPLSDYARGNV
PNNELQIYTWMDATLKELTSLVKEVNPDARRKGTKFEFSTVYMERNGRHRYKDIGRTMAG
LKGPDDNVTLQDQKFQIGDFMDIAISMPQMGRRDSWR
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagctggttcactggaagaccgactcaggagtgtagcacaggacgcgccagcg
gaagaaaagccggcgccaaagccagctattgatagagagaaaacctgtccactcttgctg
agggtttttacttgcaatggaagacaccatcctctgagtgattatgcgcgaggaaatgtg
ccaaataatgaattacagatttacacatggatggatgcaacattgaaagaattaacaagt
ctggtgaaggaagtgaatcctgacgctcgaaggaaaggaacaaagtttgagttttctaca
gtttatatggaaagaaatggacgccataggtacaaagacattggtcgaacaatggcagga
ttgaaggggccagatgacaacgttactttacaggaccaaaaattccagattggggatttc
atggacatagcaatttcaatgccacagatgggaagaagagattcatggaggtga
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