Styela clava (leathery sea squirt): 120337732
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Entry
120337732 CDS
T07291
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120337732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120337732
03036 Chromosome and associated proteins [BR:
sclv03036
]
120337732
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120337732
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120337732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
120337732
NCBI-ProteinID:
XP_039261551
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MDNVLLLILLLRRKGYGSVFFPGTIDLYGIDLDEIVHIRRKEVIVYPDDDDKPALNEGLN
RKAEVTLDMVWPSDKTTREPITDPERISLMGWEHRLEQTTAKMGARFIEYRPDTGSWVFL
VNHFSKYGLSDSDEEGDENIDPAMKLKLLQQKLKQQQQQQKGDVTMKTGLQKPKPAAVAA
LIPKHRQPSLGGIDLSEEEFMESEKNAFAGEGGDITTPKMIAPMSEDNDRMMGEYDQNET
SDKVQVMKASFFGDDELSDGSVDNQHQEDPEETSSLSVMKSQKTIHGIGSTLMKSQMSPV
HQIRKAPMKAPQTAKAPTVVSMKRFPTSVSINRTIITGKHSCVADSGLYMGRRFRVGWGP
NWSLVHSGIVGASGSEVYCDDSESSADSLSWKGTDSFSIFSADNRNQNEKGFQVKIEKVQ
CAPHLYNNTGEATDVDVQFLRSARLHAVMITPTPAEFTTSNISHLNATENEESVTCPQLC
PSDSVNTLNVYADVAKDSWQKTDRSHPDSGTVYMSHLALGLCQALWGNMYDSDMEMKQKK
NRIVNPYVDMTYRKNAVTTWLIEAIKGNYKY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgtcttgttactgattttactattgcgaagaaaaggttatggttctgtcttc
ttccctggcaccattgatctatatggtattgatcttgatgaaattgttcatataagaagg
aaagaagtgattgtttatcctgacgatgacgataaacctgcattgaatgaaggattaaat
agaaaagcagaagttactctcgacatggtgtggccaagtgacaaaacaacccgagagcca
ataactgatcctgaacgtatatctttgatgggttgggaacatagattggaacaaacaaca
gcaaagatgggagctcgattcatagaatatcgaccagatacaggatcttgggtgtttctg
gtgaatcacttttccaagtatggcttgtcagacagtgatgaagaaggcgatgaaaacatt
gatcctgccatgaaattgaaacttcttcaacaaaagttaaaacaacaacaacaacaacag
aaaggtgacgtaacaatgaagactggtttacagaagccaaaaccagcggcagttgcagcg
ttaattcctaagcatcgccaaccttctctcggaggaattgacttgtctgaagaagaattt
atggaatcggaaaagaatgcatttgctggagaaggtggagatatcactactccaaaaatg
attgctcctatgtcagaagacaatgatcgtatgatgggtgaatatgaccagaatgaaacg
agcgacaaagtccaggtgatgaaagcatcattttttggcgatgatgaactatctgatgga
tctgttgacaatcaacatcaagaagatcctgaagagacatcttcattgtctgtgatgaaa
tcacagaagacaattcatggcattgggtcaacattaatgaaaagtcaaatgtctccagtt
catcagataagaaaagcaccaatgaaagctccacagactgcaaaagcacccacagttgtt
tcaatgaaaagattcccaacttcagtatcgattaacagaaccattattacaggaaagcac
agttgtgtggctgactctggcctttatatgggccgaaggtttcgagttggttggggtccg
aattggtcgcttgtacacagtgggattgttggagcaagtggaagtgaagtctattgtgat
gatagtgaatcaagtgcagattctttgtcatggaaagggactgacagtttttctatattt
tcggctgacaatagaaatcagaatgaaaaaggatttcaagtcaaaatagagaaagtacag
tgtgctcctcatctctacaataatacaggagaagcaacagatgttgatgttcagttcctc
agaagtgctcgacttcatgcagtaatgatcacgccaactcctgctgaatttacaacttca
aatatttcacatttaaacgcaacagaaaatgaagaatctgtaacgtgtccacaactttgt
ccatcagattctgttaatacgttgaacgtatatgcagatgttgctaaagattcttggcag
aaaactgaccgaagtcatccagattctggtactgtatatatgtctcatttggcccttgga
ctctgccaagcattatggggaaatatgtatgattctgatatggagatgaagcagaagaaa
aacaggattgtaaatccttatgttgacatgacgtatagaaaaaatgctgttacgacatgg
ctcatcgaagcaatcaaaggtaattataaatattaa
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