Styela clava (leathery sea squirt): 120337810
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Entry
120337810 CDS
T07291
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04382
Cornified envelope formation
sclv04512
ECM-receptor interaction
sclv04518
Integrin signaling
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120337810
04518 Integrin signaling
120337810
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120337810
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120337810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120337810
04515 Cell adhesion molecules [BR:
sclv04515
]
120337810
04090 CD molecules [BR:
sclv04090
]
120337810
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120337810
Exosomal proteins of breast milk
120337810
Cell adhesion molecules [BR:
sclv04515
]
Integrins
Integrin alpha subunits
120337810
CD molecules [BR:
sclv04090
]
Proteins
120337810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
120337810
NCBI-ProteinID:
XP_039261633
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MDKHRHLPFSSLMIVIFIFLLGFCTTFTLAFNIEDRLPIMKMGPKGSLFGLSIAQHHITA
NSVEADNAVLLVGAPTDERAPAHSVDAVRPGGFYKCDVSEKEDCTRVIITPPENFEEEDF
STRLFPEKVNTMRTNSSNQWLGVTVKSHKPGGKIVVCAHRYTIRGGVRKAIAWEAVIGRC
FMLENSVEPLKDRLSFEYTPCQGMLNEDGKYDHLWLGYCQAGTAVNFADVPKPTKTEEYI
AIGAPGSFTWSGALYTSQLNPGLFPIGSINMWTQEVPNTKYPIKKNSLLGSSLANGVLLD
SDINYIAGAPGVNSTGSVVIFAKVQEVQDEKFVIKEMVHGDRVASRFGHEVQLIDVTGDG
RLDLIVGAPQYYDRELKLGGAVYIYVNKGLGQIGPDPTQILFGTVDSSFGMSITNLGDVN
MDGADDIAIGAPGADEWKGAVYIYHGNNQDGTKGVHDEPSQIIRASKLIEGGYLANNITG
MGYSVSGGLDMDFNGYPDVAAGSLSDSVVMFQSRPIVNIIGTIEGPDIKIELENRDVNKG
YDIEVCLRYTASPRTFDESVEATYTVKLDTTRLGTDLPTRASFSLTDTSAAEKSVNITLY
KQSRKKKKCETLTVYIKKDIQDKLSPIELELSFTTPNLLPKRQRQRRAANVPTPTPIMNR
AIENTAFAEIKFSKACGDDEICNSKLSLTAEYQILVPKGEEDVWKKIKKNSDGIPVLKLG
NEKQIGMLIDINNPAPGEDAHQARLYMWLPPVLDYTNIDMIPPIGGDIHCGPIQDNKTDA
SQLCNLGNPFPANGRMQFRLKLLKENSIYEATGFEIKLQLQTTSQQPGHDIIRDYPVIVH
VEAQLDIEGYASREQVKFGGTVIGESAVKEAEDAGSIHSHIYEVTNTGTAPANNVQLHIS
WPQNINNGKWLFYLLEANVRDGSGNCTLPEEVNPLNLRYVPGSERQKRSAEISDADPGAS
NTEPVVKEVTKGPESTQEKLICNNTASCIEFSCSLGTLGAKAKVYIDLHAVLWNSTFLEE
YKGVSKIEVQSKAMVSIAQENVQFSESSELESVVWTTVNSEVVIPVKEEVNWWIIVAASI
AGVVLLVCLVLLLWKCGFFKRKQFGDYQKARRHKQASKKADERETLY
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggataaacatcgtcatctaccattttcgtccttaatgattgttatatttatttttctt
cttggattttgcactactttcacattggcatttaacattgaggacagacttccaatcatg
aaaatgggtcccaagggcagtttgtttggcttatccatcgcacaacatcatatcacagcc
aacagtgttgaagcagacaatgctgtattgctcgtcggtgcaccaacagatgaacgtgca
cctgcacacagcgtagatgctgttcgacccggtggattttataaatgtgatgtttcagag
aaagaagattgcacaagagttattatcactccaccagaaaattttgaagaagaagatttt
tcaaccagattatttccagagaaagttaacacaatgcgaaccaattcttctaatcaatgg
cttggagttactgtaaaatcacataagcccggaggaaaaattgtggtgtgtgctcatcgt
tatactataagaggtggtgtacggaaagcaatagcatgggaggctgtaattggtcgatgt
ttcatgttggaaaactctgtcgaaccactaaaggaccgtctgtcgtttgagtatacgcca
tgtcagggtatgctgaatgaggacggaaaatacgatcatttgtggcttggatattgtcag
gccggcactgcggtgaactttgcggatgtcccgaaacccacgaaaactgaagaatatatc
gcaattggtgcccccggtagttttacttggagtggagctttatacacctcacaactaaac
cctggtctatttcccattggttctatcaacatgtggacacaagaagtacctaatacgaaa
tacccaataaagaaaaacagccttcttggttcatcactggcaaatggagttttgcttgac
tcggatattaactacattgctggagctccaggtgttaattctactggatcagttgtcatt
tttgccaaggttcaagaagtgcaagatgaaaagtttgtcataaaagaaatggttcatggt
gatagagttgcttcaagatttggacatgaagttcaacttattgatgtcactggagatggg
cgtttggacctaattgttggagcaccacaatattatgacagagaattaaaacttggaggt
gctgtctacatatatgtcaataaaggtctcgggcaaattggaccagatcccacacaaatc
ttatttgggactgttgattcatcatttggtatgtccattacaaacttgggtgatgtaaat
atggatggagcggatgatattgccatcggtgctcctggtgctgatgaatggaaaggtgca
gtttatatttaccatggtaataaccaagatggaaccaaaggcgttcacgatgaaccctcc
cagattattcgagccagcaagctcatcgaaggtggttacctagcgaataacattacagga
atgggatattctgtcagtggtggtttggatatggatttcaatgggtatccagatgttgct
gccggtagcttgtcagactcagttgtcatgtttcaatctcgtcccattgtcaatatcatt
ggtactattgaaggaccagatatcaagatcgagttagaaaatagagatgtgaataaaggg
tacgatattgaagtctgtctcagatatacagcatcaccacggacgtttgatgaatcggtc
gaagcaacttacacagttaagttagatacgacaaggttgggaacggatcttcctacaaga
gcgtcattttctttaactgatacatccgctgccgaaaaatctgtaaatatcactttatac
aaacagtcaaggaaaaagaagaaatgtgaaacattgactgtttatattaagaaagacatc
caagacaagttatctcctattgagcttgagttatctttcacaacaccaaatttgttgccg
aaacgacaacgccaacgacgtgctgccaacgttcctactccgacaccaatcatgaacaga
gcaatagaaaacactgcttttgcagaaattaagttttctaaagcgtgtggtgatgatgaa
atatgcaacagtaaattatcgctcactgcggaatatcagatattggttccaaagggtgaa
gaagatgtctggaaaaaaatcaaaaaaaacagtgacggaatcccagtactcaaactagga
aatgaaaaacaaataggaatgttgattgatattaacaatcctgcaccaggagaagatgct
catcaagccagattatacatgtggttacctcctgtgttggattatactaatatcgacatg
attccacctattggaggagatatacattgtggaccaattcaagacaataaaactgatgca
tcacagctatgtaaccttggtaatccattccctgctaacggtagaatgcaattcaggctc
aaattattgaaagaaaattcaatttatgaagctactggatttgaaataaagctgcaactt
caaacgacaagtcaacaaccaggccatgatatcataagagattatccagtaatcgttcat
gtggaagctcaacttgatattgaaggatatgcaagtagagaacaagttaaattcggagga
actgttatcggtgaatctgcagtaaaagaagctgaagatgctggcagtattcactctcac
atctatgaagtaacaaatactgggacagctcctgcaaataacgttcaacttcatatcagc
tggccacaaaacatcaacaatggtaaatggcttttttatttactggaagccaacgtaagg
gatggatcaggaaattgcactcttcctgaggaggtaaacccactcaacctacgatatgta
ccaggatctgagagacagaaaaggtcagcagaaatctctgatgctgatccaggtgcaagc
aatacagaacctgtggtaaaagaagtgactaaaggtccagagtcaactcaggagaaactt
atatgcaacaacactgcttcatgtattgaattctcatgttctctcggtacgctgggtgcc
aaagccaaagtttatattgatctccatgctgtcttatggaatagtacattcttagaagaa
tataagggagtttccaagattgaagtccagtccaaagccatggtgtccattgctcaagaa
aacgtccaattttctgaatcatcagaacttgagagtgtcgtctggacaacagttaattct
gaagttgttataccagtcaaggaagaagtcaattggtggattatagttgcagcctccata
gctggagtggtgttactagtttgtctagtgctgctactttggaagtgcggattcttcaaa
cgaaaacaatttggagattatcaaaaagcgagaagacacaagcaggcatcgaaaaaagct
gacgagagagaaaccctttactga
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integrated database retrieval system