Styela clava (leathery sea squirt): 120337906
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Entry
120337906 CDS
T07291
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120337906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120337906
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120337906
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120337906
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120337906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DUF7417
Motif
Other DBs
NCBI-GeneID:
120337906
NCBI-ProteinID:
XP_039261744
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MERKSHGNGPGPSRSKPSTRKMNIWQQVDRIGEMNAPDVHHVNQQHELDIEGVTVYDQQA
LEQGMINQMDAAFNERKKVLEVKRANREIKLVQADIREVKFSIAQAERTLGIVTSQAHDK
ETKKRLDSIKCQKSNKEKQLKTLQAKLKRLQKTAGLISEDETESSTQDQEIEKATSSAVS
WTLTGQNDEERDRLIKLGYMTPFGSVAEVSQKIEEKPPKKKFFLDEGFNNFLSAQIKPKK
KSDKDKMPKKRVKTNTELNKNFKIPKKGKGTGLKSWLEDESTDIVDEAAGNEGTLSPKNG
SEAVELESTSKEASPEGSDEDYIPDQDETSRIEQEEEINERMMERDIDHERKPIKQPKYD
PDTGLPIYEYEDEFEKKSSKLKLKKGYTRIKDDGKIENYKNRMEIYRRKIAEEKSLGIEI
PEDKDLGNGFKVPGRIWSKLYKYQKTGVRWMFELHSQKVGGILGDEMGLGKTVQIISFLA
GLQLSGLRSRSVPGHAYEGLGPVLIVTPTTVMHQWVREFQTWWPPARVAILHDSGTFDSS
RAQLIDNISQTKGILITSFERARINIEMLLEYGWHYVILDEGHKIRNPEAAVTTALKLFR
TPHRLILSGSPVQNNLRELWSLFDFIFPGKLGTLPVFMEQFSIPITQGGYSNATEIQVHT
AYKCACKLRDTISPYLLRRMKRDVQVAIDLPSKNEQVLFCRLSEHQIEVYKKYLDSDAVH
SILTREMKVFAGLIQLRKICNHPDLYTGGPKIMVGEATPNPEDERSFGFYKRSGKMLVIA
SLLKIWKKQGHKVLLFTQSKAMLDVLEIFVSSKGYRYFTMHGGTPVSSRQPLVSRFNKDP
SLFVFLLTTRVGGLGVNLTGANRVVIFDPDWNPSTDAQAQERAWRIGQKRDVTIYRLLTS
GTIEEKIYHRQIFKQFLSNRILKDPLQRRFFKSNDLHELFLLKDYGDEEKSDKKKDGETA
NCKTETAAIFAGTGSEVLPKKKKMLQKQENNQLMIMVNSKTKYAITSGKSKPESKLADQT
KLDKEPKQDMISILPQKPAITSDYSNAKSTNFGIYSEETGKITTLPLEEDIKTDDLKDAM
KDGEISENRNGKTTPSFKESLMKAKLKFEEKKRAEELDIMTKENKKSRKNKRKRKKAEVD
GEIVNNVTAVEQFKSNNDSAEVIEEKSKKATDDYVLRRLFKRAGVHSALQHNTIMDSAHP
DFALIEVEAERVAKESVRNLRLSRRQYQFPTGRQSPNTTKLRFGKKPSSTTKRKMEKDDS
SVVKLEKEKNKIFKASHIKPESKDDKSDSESESGSSKSNSPAPLSASQLLLSMRRRNHDE
IHKQEAFDTAQQNEENEMFGFTISQTSGGLDGCTQNPTEHDEILDDLRNVIAFQCEVDGQ
ARTSEIMSYFGDRVDPEHAAVFKSILKELCTSEDSRDTNEKIWTLKPEFR
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaaagtcatggaaatggacctggaccttccaggtccaagccatcaacaaga
aaaatgaatatttggcaacaagttgataggattggtgaaatgaatgcacccgatgttcat
catgttaatcagcaacatgaattggatattgaaggtgtaactgtgtacgaccaacaagcc
ttggagcaaggtatgataaatcaaatggatgctgcatttaatgaaagaaagaaagtatta
gaagtaaaaagagcaaacagggagatcaaactggtgcaggcagatattagagaagttaaa
ttcagcattgctcaagcggaaagaactctgggaattgtgacatcacaagctcatgataaa
gaaacaaagaaaagattggattctattaaatgtcaaaagtcaaacaaggaaaaacagctg
aaaacattacaggcaaagctgaaacggctacagaagacagcaggtcttataagcgaagat
gagacggaatcgagcacccaagatcaagaaattgagaaagctacttcttctgcagttagt
tggacgttaacaggtcaaaatgacgaagaaagagatcgattaataaaattaggatacatg
actccatttggctcagttgccgaagtatcacaaaaaatcgaagaaaagcctccgaagaaa
aaattttttttggacgaaggatttaataattttttaagcgcacaaataaaaccaaaaaag
aagtcggataaagataaaatgccaaaaaaaagagtgaaaacgaatacagaattaaataaa
aattttaaaatacccaaaaagggaaaaggaacaggattgaagtcttggcttgaagatgaa
tcgactgatattgttgacgaagcagcaggcaatgaaggaacattgagtccaaagaatggt
tctgaagctgttgaacttgaatcaacatcaaaagaagcgtcaccagaaggaagtgatgaa
gattatattccagatcaagatgaaacatccaggatagaacaggaggaagaaataaatgaa
agaatgatggaaagagatatagatcatgaaaggaagccgataaaacaaccaaaatatgat
ccagataccggacttcctatctatgaatatgaagatgaatttgaaaaaaaaagttcaaaa
ttgaagttaaaaaaaggttacacaagaatcaaagatgatggaaagatagaaaattacaaa
aataggatggaaatttatcgacggaaaattgctgaagaaaaatctctcggaattgaaata
ccggaggataaagatttaggaaatggattcaaagttccaggacggatttggagtaaatta
tacaagtatcaaaaaacaggagtacgctggatgtttgagcttcattcacaaaaagttggc
ggaatcttaggagatgaaatggggctcggaaaaacagttcaaattatatcttttcttgct
gggttgcaactttcaggtctcaggagtagaagtgtgcctggacatgcgtatgaaggactc
ggccctgttttgattgttaccccgacaactgtcatgcatcagtgggttcgtgagtttcaa
acttggtggccaccggctcgtgtcgcgattcttcacgattcaggaactttcgatagctca
agggctcaactaattgacaatatttctcaaactaaaggaattttgatcacatcattcgaa
agagctcgaattaacatcgaaatgctgttggaatatggatggcattatgtgatacttgat
gaaggccataaaataagaaaccctgaggctgctgtgacaactgcactcaaattgtttcga
actccacatcgtcttattctgtctggatctccagttcaaaacaatttgagagaattatgg
tcgttgtttgattttatatttcctggaaaacttggaacactgcctgtatttatggaacaa
ttctccattcctatcacacaaggtggatattcaaatgcaactgaaatacaagttcatact
gcatacaagtgtgcttgcaaattacgagatacaatttcaccgtatttgttacgtcgaatg
aaacgtgatgtgcaagttgctattgatttgccgtcaaagaacgaacaagtgttgttctgt
agattgagtgaacatcagatcgaagtttataaaaaatatttagactccgatgccgtgcat
tctatactgacaagagaaatgaaggtattcgcagggttgattcaacttcgtaaaatttgc
aatcacccagacttatatacaggaggtcctaagatcatggttggtgaagccacaccaaat
cctgaagatgaacgtagcttcggattttataaaagatctgggaaaatgttggtcatagct
tcgttacttaaaatatggaagaagcagggacataaagtattgttgttcactcaaagtaaa
gcaatgctggatgtcctagaaatatttgtttcatcgaagggatacagatattttacaatg
catggtggaacacctgtatcatccagacaaccacttgtaagcaggttcaacaaagaccct
tcactatttgtatttctgctcacaaccagagtgggtgggttgggggtcaatctcactggg
gcaaatagggtcgtgatctttgaccctgactggaaccccagcacagatgctcaagcacaa
gaacgagcatggcgcatcggacaaaaacgtgatgtaacgatttatcgacttttaacatcg
ggaacaatagaagaaaaaatatatcataggcaaattttcaaacaatttctgtcgaatcgt
attttgaaagatccattacaaagaagattttttaaatcaaatgatctgcatgaattattt
cttttaaaagattacggagacgaggagaaaagtgataagaaaaaagatggcgaaactgca
aattgcaagacagaaactgctgctatttttgctggaactggttcagaagttcttccaaag
aagaaaaagatgttgcaaaaacaagaaaataaccaattaatgatcatggtgaattcgaaa
acaaaatatgctattacatcaggaaaaagcaaaccagaatcaaaattagcggatcaaacg
aaactcgacaaagaaccgaaacaagacatgatttctatactacctcaaaaacctgccatt
acctctgattattcaaatgcaaaatcgactaattttggaatttattccgaagaaacaggt
aaaatcacaactttgcctcttgaagaagatataaaaacagatgatttaaaagatgcaatg
aaagatggagaaatttctgaaaatagaaatggaaaaacaactcctagtttcaaagaatcg
ttgatgaaagcaaaattaaagtttgaagaaaagaaaagggctgaggaacttgatattatg
acaaaagaaaataaaaagtcaagaaaaaataaaaggaagagaaagaaagcagaagtggac
ggggaaatagtgaacaatgttacagcagtagaacaattcaaatcaaataatgattctgcc
gaagttattgaagaaaaaagtaaaaaagcaacagatgattatgttctccgaagattgttt
aagagggcaggtgtacacagtgcattacaacacaatacaataatggatagtgctcatcca
gatttcgctttgattgaagtggaagctgaaagagtggcaaaagaatctgtgagaaatctt
cgtttatcaagaaggcaatatcagtttcctactggaagacaatcacctaataccacaaag
ttgagatttggtaagaagccatcttcaacgactaaaagaaagatggaaaaagatgacagt
tctgttgtcaaactcgagaaagaaaaaaataaaatattcaaagcttctcacatcaaacct
gagtcaaaagatgataaatcagattccgaaagtgaatcaggttcaagcaaaagtaattct
cctgctcctttatctgcttctcaactattactatcgatgagaagacgaaatcatgatgaa
attcacaaacaagaagcatttgatactgctcaacaaaatgaggagaacgagatgtttgga
ttcactatttctcaaacatccggaggtttggatggctgtactcagaatccaacagagcat
gatgaaattctggacgatttaagaaatgttattgcattccagtgtgaggttgatggtcaa
gcaagaacatcagaaataatgtcatattttggtgatagagtagatccagaacatgctgct
gttttcaaatcaatattgaaagaactttgcacttcagaagattccagagacacaaatgaa
aaaatatggacgctgaaacctgaatttagataa
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