Styela clava (leathery sea squirt): 120338195
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Entry
120338195 CDS
T07291
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120338195
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120338195
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
90S particles
Helicases
120338195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120338195
NCBI-ProteinID:
XP_039262073
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MDDQDVLRELCFGLKFDFKRFPEDAKKLKLVKSEKIDNTNTAKDYAPHLNFFKNKTSDPN
KKTTNGRGIETYSNKLGDTHEENNFRKLHKIFIEGTDVPDLLENFQQLISVFNLNQDMLE
AIEQNMKFSIPTPIQMQAITAMLHRREVLACAPTGSGKTLAFLIPLIAHIMGKSVGDCNT
RVKKGKRTLKGLVVSPTRELATQTLNVCKQLITPISSNVDQLMKVQILDKATMKKFQTAG
AKHRDKYDILISTPNRLVHLLTHDPPLISLESIEWLIVDESDKLFEEGNTSGFREQLGTI
YSACTSPRIRRAMFSATFAFDVQQWCHLNMDSVIQITVGGKNTAVKSVDQRLLFTGNERG
KLIALRDLFRQGFKPPVLIFVQSKERAKQLFAELIYDGMNVDAIHADRTQLQRENAVKAL
RSGSTWILICTELLGRGIDFKGVNLVVNYDFPTSAISYIHRIGRTGRAGRKGEAVTFFTE
NDKILLRSIANVIKEAGCPIPEYMLKMKKMAKDERKKMAKTKITRDTIRTTPKDILNRKR
KNKDSKTETDNKDTPQGKGPKTKKLRKSSIQHKSKENPKKL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaggatgttcttcgtgaactgtgttttgggttgaagtttgatttcaaacga
ttccctgaagatgccaaaaaattgaaattggtgaaatctgaaaagattgataacacaaac
actgcaaaagattatgcaccacatctaaattttttcaaaaataaaacttcagacccaaat
aagaaaacaacaaatggaagaggcattgaaacctattctaataagctgggtgatacacat
gaagaaaataatttccgaaaattgcacaaaattttcatagagggtactgatgtgcctgat
ttacttgaaaattttcaacaattaatttcggtgttcaacttgaatcaggacatgttggag
gctattgaacaaaacatgaaattctctattccaactcctatacaaatgcaggctattact
gcgatgttgcatagaagagaagtgcttgcttgcgctccaactggttcagggaaaaccctt
gcctttctgattcctttgattgctcatattatggggaaaagcgttggtgattgtaataca
agggttaaaaaaggaaagcggactttgaaaggattggtcgtttctccaacacgagaactc
gcaacacagacattgaatgtttgtaagcaacttataacccctatctccagtaatgtagac
caattaatgaaagtacagattcttgacaaagcaactatgaaaaaattccaaactgctggt
gcaaaacatcgcgacaaatatgacatactgatttcgacaccaaacagactggttcatcta
ttgacacatgatcctcccctaattagcttggaaagtattgaatggttgattgttgatgaa
tcagataaactattcgaagaaggaaatacaagtggcttcagagaacaacttggaacaatt
tacagtgcttgtacttcaccgagaatccgtcgtgctatgtttagtgctacctttgcattt
gatgttcaacaatggtgccatctgaatatggacagtgttatacagattactgtgggagga
aagaacactgctgtaaagtcggttgatcaaagattactttttactggaaacgaacgagga
aaattaatagctttaagagacttgtttcgacaaggtttcaaaccacctgtactgattttt
gtacaatcgaaagaacgagcaaagcagttgtttgctgaattaatttatgatggtatgaat
gtggatgcaatacatgcagaccggactcagctgcagagagaaaatgcagtcaaggctctc
cggtcaggctcaacatggatactaatatgtacagaattacttggaaggggcattgatttc
aaaggagttaatcttgttgtaaattatgactttcctactagtgcaattagctatatccat
cgtattggtcggactgggcgagcaggacgtaaaggggaagctgtaacgtttttcactgaa
aatgacaaaatattattgcgctctattgccaatgttataaaagaagccgggtgtcccata
cccgagtatatgctcaagatgaagaaaatggcaaaagatgaacgtaaaaagatggcaaag
accaaaattaccagagacacgattcgcacaacaccgaaagatattttgaacagaaaaagg
aaaaataaagactccaaaactgaaacagacaataaagatacaccacaaggcaaaggcccc
aagaccaagaaattgaggaaaagtagtatacaacataaatcaaaagaaaatccaaaaaag
ctttga
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