Styela clava (leathery sea squirt): 120338342
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Entry
120338342 CDS
T07291
Name
(RefSeq) ATP-dependent RNA helicase DDX4-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sclv03036
]
120338342
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120338342
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120338342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
P-loop_SecA
DUF7408
Motif
Other DBs
NCBI-GeneID:
120338342
NCBI-ProteinID:
XP_039262261
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MFGDEEYWDVEYPAEVLSSTTSQANTNGNYNNGIESNKSSGNIGTSFRYNNEHHDIYGES
IGNGFDEEDWDADPTWIRNDNNCSDNSAAKQTNGKSNFGNESLTTGRNNSNHGFGDMAGN
DNRRNYSTTVTCYKCGEIGHMSNNCEHLPKQFDDNQRRPRRACYKCGDETHLANNCCSTE
TNEDQRQRKVTCYKCGKDGHISRDCKNQISSRNCYKCGEEGHIASDCNTANLDNKQKNRP
PPYIPPPPSEDDDLIFSAIPTGINFNNYDSIPVEVSGVNAPSHINTFDEAELTQTIRTNV
FKSKYLTPTPVQKYSIPITNAGRDLMACAQTGSGKTAAFLLPVLSGMIRSGLQTAQFSER
QTPQAIVVGPTRELIRQIFDETRKFSRNTVIKPFMAYGGTAINNQLEILTRGCNILIATP
GRLQDLIRRERIGLEYVQYLILDEADRMLSMNFETAIRELASAPGFPDKTNRQTLLFSAT
FPDDVQKLAHDFLKEDFIFLTIGRIGGACTDVTQHVLKVDQDDKRETLIELLNDVPATGA
KTLVFVDTKRNADFLASFLSQEELPTTSIHGDRPQREREMALRDFTTGTCPIMIATSVAA
RGLDIPKVEHVINYDLPKEIDEYVHRIGRTGRCGNLGQATSFYCEFKDGGIARPLVKVLR
DANQIIPEWLEENAANSMETSHGANRGRFGARDARRGRGRGHQLSRQYTPTNREPRETFS
QNGWNSEVQSQFGSDQYAEVDRFNPRDNTDSNQTDIMAGFGEESWD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagatgaagaatactgggatgttgaatatcctgcagaagtactatcttcaact
actagccaagctaataccaacggtaactacaacaatggaattgagtcgaacaaatcgtca
ggaaatattggaacatcatttaggtacaataacgagcaccacgatatatatggagaaagc
attggaaacggctttgacgaagaagattgggatgctgatcctacatggattaggaacgac
aacaattgttctgataacagcgctgcgaaacaaacgaatggaaaatcaaatttcggtaat
gaatctctcactacagggcgaaataattcaaatcacggttttggtgatatggcgggaaac
gacaacagaagaaactattcgacgactgtgacttgttacaaatgcggtgaaatcggtcat
atgtcaaataactgtgaacatttgcccaaacaatttgacgacaaccaaaggaggccccgt
agagcttgctataaatgtggcgacgaaacccatttggctaataactgttgctccacggaa
actaacgaagatcagcgacagagaaaagttacttgttataaatgtggcaaagacggccat
atatcacgtgattgtaagaatcaaatttcgagtcgtaattgttataaatgtggagaagaa
ggccatattgccagtgactgcaacacagcaaatttagataacaaacaaaaaaatcgcccg
ccaccgtatatccccccacccccatcagaagatgatgacttaatattttctgcgattcca
actggaattaatttcaataactacgattcaataccggtagaagtaagcggtgtcaacgct
ccctctcatattaataccttcgacgaagcagaattgactcaaacaattcgcactaatgtg
ttcaagtccaagtaccttacaccgacacctgttcaaaagtatagcattccaatcacaaac
gccggaagagacttgatggcgtgtgcccaaactgggtcgggtaaaacagctgcatttttg
ttgcctgtcttgtctgggatgatacgcagcggtttacaaacagctcaattttctgaaagg
caaactcctcaagcaattgtggtaggacctacgagagaactgattcgtcaaatctttgat
gaaacaagaaaattttctcgtaatactgttataaaacctttcatggcgtatggtggaaca
gctattaacaatcaacttgaaatactcactaggggatgcaatatcctaatcgccacccct
ggtaggttgcaagacctcattagaagagaaagaatcggacttgaatatgtacaatattta
atccttgacgaagcggatcgaatgctcagcatgaacttcgaaacagccattcgtgaattg
gcaagcgcgccaggatttcctgataaaacaaatagacaaactttgctctttagtgcaact
ttccctgatgacgtacaaaaattagcgcatgattttttaaaagaagattttatatttttg
accataggtcgcattggcggtgcgtgtactgacgtcactcaacatgttttgaaagtggat
caggatgacaagcgggaaacattgattgaacttttaaatgacgtgcccgctacgggagca
aagactttagtgtttgtcgacactaaacgcaatgctgattttctagccagttttctttca
caagaggaattgcctacaacaagtattcatggtgacagacctcaacgtgaacgtgaaatg
gcattacgggatttcacaacgggaacctgtcctattatgattgctacgtcggttgctgca
agaggtttggatattcctaaagtggaacacgtgatcaactacgacttaccaaaggaaatt
gacgaatatgttcatagaatcggtagaacaggaagatgtggaaatctgggtcaagcgact
tccttttattgcgaatttaaagacggaggtattgcgcgacctcttgttaaggttcttaga
gatgccaatcaaattataccagaatggttggaagaaaatgccgccaattctatggaaaca
agtcatggcgccaacagagggcgttttggggctcgggatgcaaggcgtggccgcggtagg
ggacatcaattatcacggcaatataccccgacgaatcgtgaaccaagagaaacgtttagt
caaaatggatggaattcagaagtccaatcgcaatttggttcggatcaatatgctgaggtt
gatagatttaatcctcgggataacacagattcgaatcagacggatattatggcaggattt
ggagaggaatcttgggattaa
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