Styela clava (leathery sea squirt): 120338344
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Entry
120338344 CDS
T07291
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120338344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120338344
03021 Transcription machinery [BR:
sclv03021
]
120338344
03036 Chromosome and associated proteins [BR:
sclv03036
]
120338344
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
ARID
120338344
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120338344
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120338344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
120338344
NCBI-ProteinID:
XP_039262266
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MTPMMKSPSDHAVDTSMSDPQQQRQTYNIPEKSEMYGMRSKYGGSPSMSQGSNSWSDVPQ
QSNQIDQSFQPSPANSSNSQYNMEQQPIENSQPNSVNSNGISGAAAAAAAAMAAAAHSAK
TNSVYHKLPGPAILPSQNPTIPMHGQQQPQQQQQPPQHMPPPMQHRMPFHPNYSNVQQAN
MGMQSQPPHDPAAYQNHSFGGYHHPPPPRQPMMQRVMPPGGHQYPTGHMPQWRDPGMQPT
NSPDMRMRYVPHGYDDRPHPSYHPHLTMTNAVGPMENSMMHDVDDMKPKISASGARSSSQ
KLSALYDPPDEPGRKEFVDRVLQYWEEKELPLKHAPLMGRRTLDLFTLYQHVKKKGFMQE
VTRSKEWTEISNAMGLGNTSATGFTLKKQYCKYLYGFECRFERGEPEPQEALARVIEANR
KKKQADQQQQQVKMGENKPMNPAMMRPPHPGVHPDMQRQVHPPKQYLPSSQMDPYSQHRR
RVMPGSHMEPNSVPYMQMPNHGMPYVHGQHGQYRHDPSIPPTSYGHPQQLQQQQYRGDQM
LYRANNGYINQAQTDPNQTLQLHQEAIRPPGPVVSLPISNINSPYYRDGPRPAESMAPSL
NPNLSESNAFPVPNADSANPHLTDWPKPASVMSGNDSGGGAGTSENVQTSLDETTTVSST
QENDVKSDATHFPSTASTPKPTETTESNLPNTAPSTPALTSSSSSTPVPSTSNTGDTQNK
DIVYTSEDMKAIITKSELMSSPSQSPQTTTHPLHQKSSEKAVDPTQQLQPSQPQMPNQFG
LPPKPQNTMKQEMNRPVHAPSPLSSYPFAAGSPMPQSSPRPFIDNRTKMERPMHPGMYAS
QHPYHQQPPYRGMTPMQHRIGFGKRASQSIETYGPPNKMPRSDMGHYPDGYQGPPVRPPS
QGSEMHQYPYNRSSIQRPVHPEVGHFGPQPMSSHPQNYHHYTKHVRPPGPHADPVSPYLN
TQAVQQTRQRGSATMGTSDSASKFLQGLVKDYSPSSQQHHSNDLSTIHRSSSSRSHPQSS
HNVRNSQHQHPFSSQQQSGSSSTHGPLFPPGCVEAIQPSFANFREKTCQDVGVIEAWKVV
MSLKSGLLAESTWALNALTILLHDQNTIRHIVLHQLPGLLHTVIEHYRCCLHELFAINKE
TGNIEPDCSDEVSTKDDSLGTYSSDSISKHKANCFAKPTLDGKYFPAPSNLQSPFNKCTV
KMSIESEENTSLREDEWSENEEELTSERLHIIPSFSGNSVFEYAKNDVCAPISSNAEEHA
AEVTLEDMLSVHNNDRCLSPNKLDDFSEECSLPSHSESNVKESICNTKILRTTGTFSDSE
NPDNLFAADEDKASHIQSCLDRISWKCNVVLMEDEATGFPGNSGLLIPYSKGGRYFLSSG
GEHIFPKKLKEKESELVSRTLCLSNLIRGLSCALFNHVDLCTHEDFLKTLAGTLMQCHKH
RVRHFNSRKPPLFMESTETLVAEEGITDTNAEDVNTSLPCREDTIGKVSKSESVPNIKEN
LNVNDASQILNKRRKRVLSVTLHDCTLSMPELQNQVNGISSDTPRSDEDEIQSEIVTNKK
FNSTRKKSSHPDEQLPCSDKKTNKNNIIKDTRVAAINGECLAEKQLQNEIRPIEHEDTHQ
KLANETVKSISSCKHEDQNDKIEHLDDNDQVSEIKHENAQNDHSRSAKILLSSTVLHENA
SDREDVYGFYNHPWWWECVRQVREDSLITLANLSMSMNLSQFTNENTIYTIIDTCLHWSV
CSSADAQDPFPSNSLRTILSPQSLCVEILTKLSMKEDNVDLILATRPYRRLEKLFQKLTI
MVGNRKDQMLREFAIVLLSNFSEVESAARAIALQSGAISNLLSFLEECEETGLNNQRMFP
AGQELNCGTISYMMKRCALTLLRLARINENRPLFMKHHLRLLSLSMAVLLGSPVLSILSS
ILYELNNELPNR
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatgatgaaatcaccctctgatcatgctgttgacacttccatgtcagatccc
caacagcagcgtcaaacttacaatattcctgaaaaatcagaaatgtatggaatgcggtct
aaatatggcggttcaccttccatgtcacaaggtagcaacagttggtctgatgtcccacaa
cagagtaatcaaatagaccagagttttcaaccttcaccagcgaattcatctaattctcag
tataatatggaacagcaacccatagaaaactcacagcctaactctgtgaactctaatgga
atcagtggtgcagccgctgccgctgcagctgcgatggcggctgctgcccacagtgctaaa
accaattccgtctaccacaagctacccggtccggcgatactgccatctcagaatcctacg
atacccatgcatggccagcaacaaccacaacaacaacaacaaccaccacaacacatgcca
ccaccgatgcaacacagaatgccctttcatcctaattattctaatgtgcagcaagctaac
atgggtatgcagtcacaacctcctcatgacccggctgcttatcaaaaccattcatttgga
ggttaccatcatccacctccaccaagacaacccatgatgcagagagttatgccaccaggc
gggcaccaatatccaacaggtcatatgccccaatggagagaccccggaatgcaaccgact
aattctccagatatgcgaatgagatatgttccacatggttatgatgaccgtccacatcct
tcatatcacccacatctaaccatgacaaatgcagtgggtccaatggagaacagtatgatg
catgatgttgatgacatgaagcctaagatttctgcctcaggagcaaggtcatcatcacag
aaattatcagcactatatgacccacccgatgaaccaggaagaaaagaatttgtagatagg
gtcttacaatattgggaagagaaggaattaccactaaaacatgcacctttgatgggacga
cgtactttggatttatttacattatatcaacatgtcaagaaaaagggttttatgcaagag
gttaccaggtcaaaagaatggacagaaatatcaaatgcaatgggtttgggaaatacttca
gctactggcttcacattgaaaaaacaatactgcaagtatttatatggcttcgaatgcaga
tttgagcggggtgagcctgaaccccaagaagctcttgctagggttatcgaagcaaataga
aaaaagaaacaagctgaccaacaacaacaacaagtgaagatgggagaaaataagccgatg
aaccctgcaatgatgaggccaccacacccaggagttcaccctgatatgcagcgtcaggtt
cacccacccaaacaatacttaccatcttctcaaatggatccgtactctcaacatcgtcgc
agagtcatgcctggcagtcacatggaacctaatagtgtaccatacatgcaaatgcctaat
catggaatgccatatgttcatggtcaacatggtcaatatagacatgacccatcaataccc
cctacgtcttatgggcacccgcaacaactgcagcaacaacaatatcgcggtgatcaaatg
ctgtaccgtgcaaacaatggatatattaaccaggctcaaacagatcctaaccagactttg
caacttcatcaggaggcaatcagaccaccaggtcctgtggtgtctttaccaatatcaaat
atcaacagtccttattatcgtgatggcccacgacctgctgaaagcatggcaccgtctctc
aatcctaatttgagtgaatcgaatgcttttcctgttccgaatgcagactctgctaatcca
caccttactgattggccgaaacctgcatcagttatgtcagggaatgatagtggaggaggg
gctggtacttctgaaaatgtacagacatcactagatgaaacaacaactgtgtccagcact
caggaaaatgatgtcaagtcagatgctactcattttccatcaacagcttctacgcccaaa
cctacagaaactacggagtctaatcttccaaacactgcaccgtcgacacctgctctgaca
tcgtcttccagctctacaccagttccatccaccagtaatactggtgacacacaaaacaag
gacattgtatatacatctgaagatatgaaagcaataatcacaaaaagtgaactaatgtcc
tcaccttctcaatcacctcaaacaacaacacatcctttgcatcagaagtcttctgagaag
gcagttgatccaacacaacagctacaaccatctcagccccagatgccaaatcaatttggt
cttcctccaaaaccccagaatacaatgaaacaagagatgaatcgtcctgttcatgccccg
tcccctctgagttcttatccatttgcagcaggaagtccaatgccacaaagttccccccgg
ccttttattgataaccgtacaaagatggaacggccaatgcatcctggaatgtatgcttct
cagcacccatatcatcagcagccaccttatcgcggaatgactccaatgcagcacagaatt
ggttttggtaaacgagcatctcagtcaatagagacttacgggccaccaaataaaatgcct
agatcagacatgggacattatccggatgggtatcagggcccacctgtacgacctccatca
caaggaagcgaaatgcatcaatatccatataatagaagttcaatacaacgaccagtgcat
ccagaggttggtcattttggtcctcagccaatgtcgtcccatcctcaaaactaccatcat
tatacgaaacatgtccgtccacctggcccacatgcggacccagtgtcgccatacctaaat
actcaagcagttcaacagacgaggcagcgtggatcagcaacaatgggtacatcagattct
gcctcgaaattcttgcaaggtctcgtcaaagattactcaccttcctctcaacaacatcat
tctaatgatctgtcaacaatacatagaagttcatcttctcgttcccacccacagtctagc
cacaatgtacgtaacagtcaacatcaacatccatttagtagtcagcaacaaagtggttcc
tcaagcacacatggtccgttatttccaccaggctgcgttgaagccattcaaccaagtttt
gccaatttcagagaaaagacatgtcaagatgttggagtaatagaagcatggaaagtagta
atgtcactaaagagtggtcttcttgctgaaagtacatgggcactgaatgcattgactatt
ttgcttcatgaccaaaacacaattcgccatattgtgcttcatcaacttcctggactgttg
catacagtcattgaacactacagatgttgtcttcatgaactgtttgccataaataaggaa
actggcaatatcgaaccagattgcagtgatgaggtctcaacaaaagatgacagtcttggt
acgtatagctcggacagcatttctaaacacaaggcaaattgctttgcaaagcccacattg
gatggcaaatattttcctgcaccgtctaatttacagagtccgttcaataaatgtactgtg
aaaatgtccattgagagtgaagaaaacacctccttgcgggaagatgagtggagtgaaaat
gaggaggaattgaccagcgagcggctccatattattccaagtttcagtggaaattcagtt
tttgaatatgcaaaaaatgatgtttgtgcgcctatttccagtaatgcagaagaacatgcc
gctgaagttacccttgaagatatgttatctgtacataataacgatagatgtctgtcaccg
aataagcttgatgactttagtgaggaatgttcacttccatcgcactctgaatctaatgtt
aaagagagtatttgcaacactaagattttgagaacaactggaacattttcagattctgaa
aatccagacaatttgtttgctgctgatgaagataaagcttctcacatacagtcttgtctt
gatagaatttcttggaaatgcaatgttgtgcttatggaagatgaagcaacaggttttcct
ggaaattctggacttctaataccctatagcaagggtgggagatattttctttccagtggt
ggggagcatatttttcctaagaaactaaaagaaaaagaatctgaacttgtttctcgaact
ttatgtttgtccaacttgatcaggggtttgtcttgcgcgttattcaaccatgtagatctt
tgcactcacgaagattttttgaaaacattagcggggacattgatgcaatgtcacaagcat
agggtaagacattttaactccagaaaaccccctctgtttatggaatctacagaaacgctt
gttgccgaagaaggtattacagatacaaatgcggaagatgtgaatacttcccttccttgc
cgagaagacactataggaaaagtttcaaagagtgaaagtgttccaaatataaaagaaaat
ttaaatgtcaatgatgcttctcaaatattaaataaacgccgcaaaagggtactaagtgta
actctgcatgactgtacattatctatgcctgagctacagaatcaagttaatggaatatcc
agtgatactcctcgttcagatgaagatgaaatccagtctgaaattgtcaccaataaaaaa
tttaattccaccagaaagaagtcatcgcacccagatgaacagttgccatgttctgacaag
aagactaataaaaataatatcataaaggatacacgtgttgctgcaataaatggtgaatgt
ttggcagaaaaacaactgcaaaatgaaataaggccgattgagcatgaagacacccaccaa
aaacttgcaaatgaaactgtgaagtctatatcgagttgtaaacatgaggatcaaaatgat
aaaatagagcatttagatgacaatgatcaagtttccgaaatcaagcatgagaatgcacaa
aatgatcatagtcgtagtgcaaaaatattgctaagctctacagtacttcatgaaaacgcc
agtgacagagaagatgtttatgggttctacaatcatccatggtggtgggaatgtgtgagg
caggtacgagaagattccctcatcacacttgccaacctgtcaatgtcaatgaatttgtct
caattcacaaatgaaaatacaatatataccattatcgacacatgtctacattggtcagtt
tgctcgtccgctgatgctcaagatccatttcccagtaacagtctaagaactatattatca
cctcagagtctctgcgttgaaatactgacaaaacttagcatgaaagaagacaatgttgac
ctcatattagcgacaagaccatacaggcgattggaaaaactttttcaaaaattgacaata
atggttggaaatcgtaaagaccaaatgcttagggaatttgccattgttctgttatcgaat
ttctctgaagtagagagtgcagcaagagccattgcactccaatctggagctatttctaat
cttctgagctttctcgaggaatgtgaagaaacaggtttaaataaccagaggatgtttcct
gctggtcaagagctaaattgcggtacaatatcatacatgatgaaaagatgtgcattaaca
ttactgagacttgctagaattaatgaaaacaggcccctgttcatgaagcaccatcttcgt
ttactgtcattatcaatggcggttctgttaggtagtcccgttctttctattctctcgtcc
attctttatgaattgaacaatgaactgccaaacagatga
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integrated database retrieval system
